/[PAMELA software]/PamelaLevel2/src/PamLevel2.cpp
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revision 1.18 by pam-fi, Thu Jan 18 08:51:16 2007 UTC revision 1.60 by pam-fi, Tue Mar 11 13:48:40 2008 UTC
# Line 1  Line 1 
1  #include <PamLevel2.h>  #include <PamLevel2.h>
2    
3    
4    
5    /////////////////////////////////////////////////////////////////////////////
6    /////////////////////////////////////////////////////////////////////////////
7    /////////////////////////////////////////////////////////////////////////////
8    /////////////////////////////////////////////////////////////////////////////
9    
10    void GPamela::Clear(){
11        Irun   = 0;
12        Ievnt  = 0;
13        Ipa    = 0;
14        X0     = 0.;
15        Y0     = 0.;
16        Z0     = 0.;
17        Theta  = 0.;
18        Phi    = 0.;
19        P0     = 0.;
20        Nthtof  = 0;
21        Nthcat  = 0;
22        Nthcas  = 0;
23        Nthspe  = 0;
24        Nstrpx  = 0;
25        Nstrpy  = 0;
26        Nthcali = 0;
27        Nthcal  = 0;
28        Nthnd   = 0;
29        Nthcard = 0;
30    }
31    
32    void GPamela::Delete(){
33    
34        Clear();
35    
36        delete []    Ipltof;  
37        delete []    Ipaddle;
38        delete []    Ipartof;
39        delete []    Xintof;  
40        delete []    Yintof;  
41        delete []    Zintof;  
42        delete []    Xouttof;
43        delete []    Youttof;
44        delete []    Zouttof;
45        delete []    Ereltof;
46        delete []    Timetof;
47        delete []    Pathtof;
48        delete []    P0tof;  
49        delete []    Iparcat;
50        delete []    Icat;  
51        delete []    Xincat;  
52        delete []    Yincat;  
53        delete []    Zincat;  
54        delete []    Xoutcat;
55        delete []    Youtcat;
56        delete []    Zoutcat;
57        delete []    Erelcat;
58        delete []    Timecat;
59        delete []    Pathcat;
60        delete []    P0cat;  
61        delete []    Iparcas;
62        delete []    Icas;  
63        delete []    Xincas;  
64        delete []    Yincas;  
65        delete []    Zincas;  
66        delete []    Xoutcas;
67        delete []    Youtcas;
68        delete []    Zoutcas;
69        delete []    Erelcas;
70        delete []    Timecas;
71        delete []    Pathcas;
72        delete []    P0cas;  
73        delete []    Iparspe;
74        delete []    Itrpb;  
75        delete []    Itrsl;  
76        delete []    Itspa;  
77        delete []    Xinspe;  
78        delete []    Yinspe;  
79        delete []    Zinspe;  
80        delete []    Xoutspe;
81        delete []    Youtspe;
82        delete []    Zoutspe;
83        delete []    Xavspe;  
84        delete []    Yavspe;  
85        delete []    Zavspe;  
86        delete []    Erelspe;
87        delete []    Pathspe;
88        delete []    P0spe;  
89        delete []    Nxmult;  
90        delete []    Nymult;  
91        delete []    Npstripx;
92        delete []    Ntstripx;
93        delete []    Istripx;
94        delete []    Qstripx;
95        delete []    Xstripx;
96        delete []    Npstripy;
97        delete []    Ntstripy;
98        delete []    Istripy;
99        delete []    Qstripy;
100        delete []    Ystripy;
101        delete []    Icaplane;
102        delete []    Icastrip;
103        delete []    Icamod;  
104        delete []    Enestrip;
105        delete []    Icapl;  
106        delete []    Icasi;  
107        delete []    Icast;  
108        delete []    Xincal;  
109        delete []    Yincal;  
110        delete []    Zincal;  
111        delete []    Erelcal;
112        delete []    Itubend;
113        delete []    Iparnd;  
114        delete []    Xinnd;  
115        delete []    Yinnd;  
116        delete []    Zinnd;  
117        delete []    Xoutnd;  
118        delete []    Youtnd;  
119        delete []    Zoutnd;  
120        delete []    Erelnd;  
121        delete []    Timend;  
122        delete []    Pathnd;  
123        delete []    P0nd;  
124        delete []    Iparcard;
125        delete []    Icard;  
126        delete []    Xincard;
127        delete []    Yincard;
128        delete []    Zincard;
129        delete []    Xoutcard;
130        delete []    Youtcard;
131        delete []    Zoutcard;
132        delete []    Erelcard;
133        delete []    Timecard;
134        delete []    Pathcard;
135        delete []    P0card;  
136    
137    
138    };
139    
140    
141    
142    void GPamela::SetBranchAddress( TChain* fhBookTree ){
143    
144    //    cout << "fhBookTree "<<fhBookTree << endl;
145        // prepare tree
146        fhBookTree->SetBranchAddress("Irun",&Irun);
147        fhBookTree->SetBranchAddress("Ievnt",&Ievnt);
148        fhBookTree->SetBranchAddress("Ipa",&Ipa);
149        fhBookTree->SetBranchAddress("X0",&X0);
150        fhBookTree->SetBranchAddress("Y0",&Y0);
151        fhBookTree->SetBranchAddress("Z0",&Z0);
152        fhBookTree->SetBranchAddress("Theta",&Theta);
153        fhBookTree->SetBranchAddress("Phi",&Phi);
154        fhBookTree->SetBranchAddress("P0",&P0);
155        fhBookTree->SetBranchAddress("Nthtof",&Nthtof);
156        fhBookTree->SetBranchAddress("Ipltof",Ipltof);
157        fhBookTree->SetBranchAddress("Ipaddle",Ipaddle);
158        fhBookTree->SetBranchAddress("Ipartof",Ipartof);
159        fhBookTree->SetBranchAddress("Xintof",Xintof);
160        fhBookTree->SetBranchAddress("Yintof",Yintof);
161        fhBookTree->SetBranchAddress("Zintof",Zintof);
162        fhBookTree->SetBranchAddress("Xouttof",Xouttof);
163        fhBookTree->SetBranchAddress("Youttof",Youttof);
164        fhBookTree->SetBranchAddress("Zouttof",Zouttof);
165        fhBookTree->SetBranchAddress("Ereltof",Ereltof);
166        fhBookTree->SetBranchAddress("Timetof",Timetof);
167        fhBookTree->SetBranchAddress("Pathtof",Pathtof);
168        fhBookTree->SetBranchAddress("P0tof",P0tof);
169        fhBookTree->SetBranchAddress("Nthcat",&Nthcat);
170        fhBookTree->SetBranchAddress("Iparcat",Iparcat);
171        fhBookTree->SetBranchAddress("Icat",Icat);
172        fhBookTree->SetBranchAddress("Xincat",Xincat);
173        fhBookTree->SetBranchAddress("Yincat",Yincat);
174        fhBookTree->SetBranchAddress("Zincat",Zincat);
175        fhBookTree->SetBranchAddress("Xoutcat",Xoutcat);
176        fhBookTree->SetBranchAddress("Youtcat",Youtcat);
177        fhBookTree->SetBranchAddress("Zoutcat",Zoutcat);
178        fhBookTree->SetBranchAddress("Erelcat",Erelcat);
179        fhBookTree->SetBranchAddress("Timecat",Timecat);
180        fhBookTree->SetBranchAddress("Pathcat",Pathcat);
181        fhBookTree->SetBranchAddress("P0cat",P0cat);
182        fhBookTree->SetBranchAddress("Nthcas",&Nthcas);
183        fhBookTree->SetBranchAddress("Iparcas",Iparcas);
184        fhBookTree->SetBranchAddress("Icas",Icas);
185        fhBookTree->SetBranchAddress("Xincas",Xincas);
186        fhBookTree->SetBranchAddress("Yincas",Yincas);
187        fhBookTree->SetBranchAddress("Zincas",Zincas);
188        fhBookTree->SetBranchAddress("Xoutcas",Xoutcas);
189        fhBookTree->SetBranchAddress("Youtcas",Youtcas);
190        fhBookTree->SetBranchAddress("Zoutcas",Zoutcas);
191        fhBookTree->SetBranchAddress("Erelcas",Erelcas);
192        fhBookTree->SetBranchAddress("Timecas",Timecas);
193        fhBookTree->SetBranchAddress("Pathcas",Pathcas);
194        fhBookTree->SetBranchAddress("P0cas",P0cas);
195        fhBookTree->SetBranchAddress("Nthspe",&Nthspe);
196        fhBookTree->SetBranchAddress("Iparspe",Iparspe);
197        fhBookTree->SetBranchAddress("Itrpb",Itrpb);
198        fhBookTree->SetBranchAddress("Itrsl",Itrsl);
199        fhBookTree->SetBranchAddress("Itspa",Itspa);
200        fhBookTree->SetBranchAddress("Xinspe",Xinspe);
201        fhBookTree->SetBranchAddress("Yinspe",Yinspe);
202        fhBookTree->SetBranchAddress("Zinspe",Zinspe);
203        fhBookTree->SetBranchAddress("Xoutspe",Xoutspe);
204        fhBookTree->SetBranchAddress("Youtspe",Youtspe);
205        fhBookTree->SetBranchAddress("Zoutspe",Zoutspe);
206        fhBookTree->SetBranchAddress("Xavspe",Xavspe);
207        fhBookTree->SetBranchAddress("Yavspe",Yavspe);
208        fhBookTree->SetBranchAddress("Zavspe",Zavspe);
209        fhBookTree->SetBranchAddress("Erelspe",Erelspe);
210        fhBookTree->SetBranchAddress("Pathspe",Pathspe);
211        fhBookTree->SetBranchAddress("P0spe",P0spe);
212        fhBookTree->SetBranchAddress("Nxmult",Nxmult);
213        fhBookTree->SetBranchAddress("Nymult",Nymult);
214        fhBookTree->SetBranchAddress("Nstrpx",&Nstrpx);
215        fhBookTree->SetBranchAddress("Npstripx",Npstripx);
216        fhBookTree->SetBranchAddress("Ntstripx",Ntstripx);
217        fhBookTree->SetBranchAddress("Istripx",Istripx);
218        fhBookTree->SetBranchAddress("Qstripx",Qstripx);
219        fhBookTree->SetBranchAddress("Xstripx",Xstripx);
220        fhBookTree->SetBranchAddress("Nstrpy",&Nstrpy);
221        fhBookTree->SetBranchAddress("Npstripy",Npstripy);
222        fhBookTree->SetBranchAddress("Ntstripy",Ntstripy);
223        fhBookTree->SetBranchAddress("Istripy",Istripy);
224        fhBookTree->SetBranchAddress("Qstripy",Qstripy);
225        fhBookTree->SetBranchAddress("Ystripy",Ystripy);
226        fhBookTree->SetBranchAddress("Nthcali",&Nthcali);
227        fhBookTree->SetBranchAddress("Icaplane",Icaplane);
228        fhBookTree->SetBranchAddress("Icastrip",Icastrip);
229        fhBookTree->SetBranchAddress("Icamod",Icamod);
230        fhBookTree->SetBranchAddress("Enestrip",Enestrip);
231        fhBookTree->SetBranchAddress("Nthcal",&Nthcal);
232        fhBookTree->SetBranchAddress("Icapl",Icapl);
233        fhBookTree->SetBranchAddress("Icasi",Icasi);
234        fhBookTree->SetBranchAddress("Icast",Icast);
235        fhBookTree->SetBranchAddress("Xincal",Xincal);
236        fhBookTree->SetBranchAddress("Yincal",Yincal);
237        fhBookTree->SetBranchAddress("Zincal",Zincal);
238        fhBookTree->SetBranchAddress("Erelcal",Erelcal);
239        fhBookTree->SetBranchAddress("Nthnd",&Nthnd);
240        fhBookTree->SetBranchAddress("Itubend",Itubend);
241        fhBookTree->SetBranchAddress("Iparnd",Iparnd);
242        fhBookTree->SetBranchAddress("Xinnd",Xinnd);
243        fhBookTree->SetBranchAddress("Yinnd",Yinnd);
244        fhBookTree->SetBranchAddress("Zinnd",Zinnd);
245        fhBookTree->SetBranchAddress("Xoutnd",Xoutnd);
246        fhBookTree->SetBranchAddress("Youtnd",Youtnd);
247        fhBookTree->SetBranchAddress("Zoutnd",Zoutnd);
248        fhBookTree->SetBranchAddress("Erelnd",Erelnd);
249        fhBookTree->SetBranchAddress("Timend",Timend);
250        fhBookTree->SetBranchAddress("Pathnd",Pathnd);
251        fhBookTree->SetBranchAddress("P0nd",P0nd);
252        fhBookTree->SetBranchAddress("Nthcard",&Nthcard);
253        fhBookTree->SetBranchAddress("Iparcard",Iparcard);
254        fhBookTree->SetBranchAddress("Icard",Icard);
255        fhBookTree->SetBranchAddress("Xincard",Xincard);
256        fhBookTree->SetBranchAddress("Yincard",Yincard);
257        fhBookTree->SetBranchAddress("Zincard",Zincard);
258        fhBookTree->SetBranchAddress("Xoutcard",Xoutcard);
259        fhBookTree->SetBranchAddress("Youtcard",Youtcard);
260        fhBookTree->SetBranchAddress("Zoutcard",Zoutcard);
261        fhBookTree->SetBranchAddress("Erelcard",Erelcard);
262        fhBookTree->SetBranchAddress("Timecard",Timecard);
263        fhBookTree->SetBranchAddress("Pathcard",Pathcard);
264        fhBookTree->SetBranchAddress("P0card",P0card);
265    
266    //    fhBookTree->SetBranchStatus("*",0);
267    
268    }
269    
270    ClassImp(GPamela);
271    
272    /////////////////////////////////////////////////////////////////////////////
273    /////////////////////////////////////////////////////////////////////////////
274    /////////////////////////////////////////////////////////////////////////////
275    /////////////////////////////////////////////////////////////////////////////
276  //--------------------------------------  //--------------------------------------
277  //  //
278  //  //
# Line 11  PamTrack::PamTrack(){ Line 285  PamTrack::PamTrack(){
285      calo_track = 0;      calo_track = 0;
286      tof_track  = 0;      tof_track  = 0;
287      candeleteobj = 0;      candeleteobj = 0;
288        pscore = 0;
289        iscore = 0;
290  };  };
291  //--------------------------------------  //--------------------------------------
292  //  //
# Line 60  void PamTrack::Clear(){ Line 336  void PamTrack::Clear(){
336          calo_track = 0;          calo_track = 0;
337          tof_track  = 0;          tof_track  = 0;
338      }      }
339        pscore = 0;
340        iscore = 0;
341    
342  }  }
343  void PamTrack::Delete(){  void PamTrack::Delete(){
344  //    cout << "PamTrack::Delete() "<<candeleteobj<<endl;  //    cout << "PamTrack::Delete() "<<candeleteobj<<endl;
# Line 85  void PamTrack::Delete(){ Line 364  void PamTrack::Delete(){
364  //  //
365  //--------------------------------------  //--------------------------------------
366  /**  /**
367   * Constructor   * Default Constructor
368   */   */
369  PamLevel2::PamLevel2(){  PamLevel2::PamLevel2(){
370        Initialize();
371    };
372    
373    /**
374     * Constructor
375     * @param ddir Name of directory where level2 files are stored.
376     * @param list Name of an ascii file containing the list of file names
377     * @param detlist Options to chose what to load.
378     * Possible options are:
379     *       +AUTO --> load all trees/branches in the input files
380     *       +(-)ALL --> inlcude(exclude) all trees/branches
381     *       +(-)TRK1+(-)TRK2+(-)CAL1+(-)CAL2+(-)TOF+(-)TRG+(-)ND+(-)S4+(-)ORB+(-)AC --> inlcude(exclude) trees and branches
382     *       +(-)TRK0 --> include(exclude) tracker level0 tree
383     *       +(-)GP --> include exclude GPAMELA output tree
384     * If no options are specified, the default is assumed. Default is:
385     * +TRK2+CAL2+CAL1+TOF+TRG+ND+AC+S4+ORB
386     */
387    PamLevel2::PamLevel2(TString ddir,TString list,TString detlist){
388        Initialize();
389        TList*  listf = GetListOfLevel2Files(ddir,list);
390        GetPamTree(listf,detlist);
391        GetRunTree(listf);
392    };
393    
394    /**
395     * Constructor
396     * @param ddir Name of directory where level2 files are stored.
397     * @param list Name of an ascii file containing the list of file names
398     * Default trees/branches are loaded. Default is:
399     * +TRK2+CAL2+CAL1+TOF+TRG+ND+AC+S4+ORB
400     */
401    PamLevel2::PamLevel2(TString ddir,TString list){
402        Initialize();
403        TList*  listf = GetListOfLevel2Files(ddir,list);
404        GetPamTree(listf,"");
405        GetRunTree(listf);
406    };
407    
408    
409    void PamLevel2::Initialize(){
410                    
411  //     trk2_obj  = TrkLevel2::GetTrkLevel2();      h0_obj    = 0;
412  //     trk1_obj  = TrkLevel1::GetTrkLevel1();      trk0_obj  = 0;
413  //     trkh_obj  = TrkHough::GetTrkHough();      calo0_obj  = 0;
414  //     calo1_obj = CaloLevel1::GetCaloLevel1();  
 //     calo2_obj = CaloLevel2::GetCaloLevel2();  
 //     tof_obj   = ToFLevel2::GetToFLevel2();  
 //     trig_obj  = TrigLevel2::GetTrigLevel2();  
 //     s4_obj    = S4Level2::GetS4Level2();  
 //     nd_obj    = NDLevel2::GetNDLevel2();  
 //     ac_obj    = AcLevel2::GetAcLevel2();  
 //     orb_obj   = OrbitalInfo::GetOrbitalInfo();  
415      trk2_obj  = 0;      trk2_obj  = 0;
416      trk1_obj  = 0;      trk1_obj  = 0;
417      trkh_obj  = 0;      trkh_obj  = 0;
# Line 111  PamLevel2::PamLevel2(){ Line 423  PamLevel2::PamLevel2(){
423      nd_obj    = 0;      nd_obj    = 0;
424      ac_obj    = 0;      ac_obj    = 0;
425      orb_obj   = 0;      orb_obj   = 0;
426        gp_obj    = 0;
427    
428      run_obj   = 0;//new GL_RUN();      run_obj   = 0;//new GL_RUN();
429      soft_obj   = 0;// Emiliano      soft_obj   = 0;// Emiliano
430      irun = -1;      irun = -1LL;
431      runfirstentry = 0ULL;      irunt = -1LL;
432      runlastentry = 0ULL;      runfirstentry = 0LL;
433        runlastentry = 0LL;
434    
435        l0_file = NULL;
436        l0_tree = NULL;
437        iroot   = -1;
438        dbc     = 0;
439    
440        prevshift = 0;
441        maxshift = 10; //EMILIANO
442        
443        run_tree = NULL;
444        run_tree_clone = NULL;
445        sel_tree = NULL;
446        sel_tree_clone = NULL;
447        
448        irunentry = -1LL;
449        pam_tree = NULL;
450        for(Int_t i=0; i<NCLONES; i++ )pam_tree_clone[i]=NULL;
451    
452        totdltime[0] = 0LL;
453        totdltime[1] = 0LL;
454        totdltime[2] = 0LL;
455    
456        host = "mysql://localhost/pamelaprod";
457        user = "anonymous";
458        psw = "";
459        const char *pamdbhost=gSystem->Getenv("PAM_DBHOST");
460        const char *pamdbuser=gSystem->Getenv("PAM_DBUSER");
461        const char *pamdbpsw=gSystem->Getenv("PAM_DBPSW");
462        if ( !pamdbhost ) pamdbhost = "";
463        if ( !pamdbuser ) pamdbuser = "";
464        if ( !pamdbpsw ) pamdbpsw = "";
465        if ( strcmp(pamdbhost,"") ) host = pamdbhost;
466        if ( strcmp(pamdbuser,"") ) user = pamdbuser;
467        if ( strcmp(pamdbpsw,"") ) psw = pamdbpsw;
468    
469      for(Int_t i=0; i<8; i++ )tree_clone[i]=NULL;      
470    
471  //    sorted_tracks = 0;//new TRefArray();  //    sorted_tracks = 0;//new TRefArray();
472            
473        CAL0 = false;
474      CAL1 = true;      CAL1 = true;
475      CAL2 = true;      CAL2 = true;
476      TRK2 = true;      TRK2 = true;
477      TRK1 = false;      TRK1 = false;
478        TRK0 = false;
479      TRKh = false;      TRKh = false;
480      TRG = true;      TRG  = true;
481      TOF = true;      TOF  = true;
482      S4  = true;      TOF0 = false;
483      ND  = true;      S4   = true;
484      AC  = true;      ND   = true;
485      ORB = true;      AC   = true;
486            ORB  = true;    
487      RUN = true;      GP   = false;
488    
489        RUN  = true;
490    
491        SELLI = -1;
492    
493        ISGP = false;
494    
495        DBG = false;
496    
497      tsorted=0;      tsorted=0;
498      timage=0;      timage=0;
499        
500        howtosort = "+CAL+TOF";
501        //howtosort = "+TOF";
502        sortthr = 100.;
503    
504  };  };
505  /**  /**
# Line 149  void PamLevel2::Delete(){ Line 511  void PamLevel2::Delete(){
511      if(soft_obj)delete soft_obj; //Emiliano      if(soft_obj)delete soft_obj; //Emiliano
512    
513  //    cout << "void PamLevel2::Clear()"<<endl;  //    cout << "void PamLevel2::Clear()"<<endl;
514        if(h0_obj)   delete h0_obj;
515        if(trk0_obj) delete trk0_obj;      
516        if(calo0_obj) delete calo0_obj;    
517      if(trk1_obj) delete trk1_obj;            if(trk1_obj) delete trk1_obj;      
518      if(trk2_obj) delete trk2_obj;      if(trk2_obj) delete trk2_obj;
519      if(trkh_obj) delete trkh_obj;      if(trkh_obj) delete trkh_obj;
# Line 160  void PamLevel2::Delete(){ Line 525  void PamLevel2::Delete(){
525      if(nd_obj)   delete nd_obj;      if(nd_obj)   delete nd_obj;
526      if(ac_obj)   delete ac_obj;      if(ac_obj)   delete ac_obj;
527      if(orb_obj)  delete orb_obj;      if(orb_obj)  delete orb_obj;
528        if(gp_obj)   delete gp_obj;
529            
530      if(tsorted){      if(tsorted){
531          tsorted->Delete();          tsorted->Delete();
# Line 169  void PamLevel2::Delete(){ Line 535  void PamLevel2::Delete(){
535          timage->Delete();          timage->Delete();
536          delete timage;          delete timage;
537      }      }
538    
539        if(dbc){
540            dbc->Close();
541            delete dbc;
542        }
543        
544        if(l0_file)l0_file->Close();
545        //    if(pam_tree)pam_tree->Delete();;
546    
547        if ( pam_tree ){
548            //
549            // we have first to find which chains we have to delete, then delete the main chain and only after delete the friend chains. Any other order causes a segfault...
550            //
551            TList *temp = pam_tree->GetListOfFriends();
552            TList *contents  = new TList; // create chain friend list
553            contents->SetOwner();
554            TIter next(temp);
555            TChain *questo = 0;
556            while ( (questo = (TChain*) next()) ){
557                TString name =  questo->GetName();
558                contents->Add((TChain*)gROOT->FindObject(name.Data()));// add object to the list
559            };
560            //
561            // deleting the main chain
562            //
563            pam_tree->Delete();
564            //
565            // deleting the friends...
566            //
567            TIter next2(contents);
568            TChain *questa = 0;
569            while ( questa = (TChain*)next2() ){
570                TString name =  questa->GetName();
571                questa->Delete();      
572                questa=NULL;
573            };
574            //
575        };
576        pam_tree = NULL;
577    
578        if(run_tree)run_tree->Delete();;
579        if(sel_tree)sel_tree->Delete();;
580        for(Int_t i=0; i<NCLONES; i++ )if(pam_tree_clone[i])pam_tree_clone[i]->Delete();;
581        if(run_tree_clone)run_tree_clone->Delete();;
582        if(sel_tree_clone)sel_tree_clone->Delete();;
583        
584        if(irunoffset) delete [] irunoffset;
585    
586  };  };
587    
588  /**  /**
# Line 186  void PamLevel2::Clear(){ Line 600  void PamLevel2::Clear(){
600  //    if(run_obj) run_obj->Clear();  // Emiliano: Do not deallocate run_obj here, it will give segmentation fault! call clear instead  //    if(run_obj) run_obj->Clear();  // Emiliano: Do not deallocate run_obj here, it will give segmentation fault! call clear instead
601  //    if(soft_obj) soft_obj->Clear();  //    if(soft_obj) soft_obj->Clear();
602    
603        if(h0_obj)   h0_obj->Clear();      
604    //    if(trk0_obj) trk0_obj->Clear();  
605      if(trk1_obj) trk1_obj->Clear();          if(trk1_obj) trk1_obj->Clear();    
606      if(trk2_obj) trk2_obj->Clear();      if(trk2_obj) trk2_obj->Clear();
607      if(trkh_obj) trkh_obj->Clear();      if(trkh_obj) trkh_obj->Clear();
608        if(calo0_obj) calo0_obj->Clear();  
609      if(calo1_obj)calo1_obj->Clear();      if(calo1_obj)calo1_obj->Clear();
610      if(calo2_obj)calo2_obj->Clear();      if(calo2_obj)calo2_obj->Clear();
611      if(tof_obj)  tof_obj->Clear();      if(tof_obj)  tof_obj->Clear();
# Line 197  void PamLevel2::Clear(){ Line 614  void PamLevel2::Clear(){
614      if(nd_obj)   nd_obj->Clear();      if(nd_obj)   nd_obj->Clear();
615      if(ac_obj)   ac_obj->Clear();      if(ac_obj)   ac_obj->Clear();
616      if(orb_obj)  orb_obj->Clear();      if(orb_obj)  orb_obj->Clear();
617        if(gp_obj)   gp_obj->Clear();
618            
619  //    if(sorted_tracks)sorted_tracks->Clear();  //    if(sorted_tracks)sorted_tracks->Clear();
620  //    sorted_tracks.Clear();  //    sorted_tracks.Clear();
# Line 207  void PamLevel2::Clear(){ Line 625  void PamLevel2::Clear(){
625      if(timage){      if(timage){
626          timage->Delete();          timage->Delete();
627      }      }
       
628  };  };
629    
630    void PamLevel2::Reset(){
631        //
632        // First of all clear everything
633        //
634        Clear();
635        //
636        // close and reset chains and pointers
637        //    
638        if ( pam_tree ){
639            //
640            // we have first to find which chains we have to delete, then delete the main chain and only after delete the friend chains. Any other order causes a segfault...
641            //
642            TList *temp = pam_tree->GetListOfFriends();
643            TList *contents  = new TList; // create chain friend list
644            contents->SetOwner();
645            TIter next(temp);
646            TChain *questo = 0;
647            while ( (questo = (TChain*) next()) ){
648                TString name =  questo->GetName();
649                contents->Add((TChain*)gROOT->FindObject(name.Data()));// add object to the list
650            };
651            //
652            // deleting the main chain
653            //
654            pam_tree->Delete();
655            //
656            // deleting the friends...
657            //
658            TIter next2(contents);
659            TChain *questa = 0;
660            while ( questa = (TChain*)next2() ){
661                TString name =  questa->GetName();
662                questa->Delete();      
663                questa=NULL;
664            };
665            //
666        };
667        pam_tree = NULL;
668        //
669        if(run_tree)run_tree->Delete();;
670        run_tree = NULL;
671        if(sel_tree)sel_tree->Delete();;
672        sel_tree = NULL;
673        //
674        // Close file
675        //
676        if(l0_file)l0_file->Close("R");
677        l0_file = NULL;
678        //
679        h0_obj    = 0;
680        trk0_obj  = 0;
681        calo0_obj  = 0;
682        //
683        trk2_obj  = 0;
684        trk1_obj  = 0;
685        trkh_obj  = 0;
686        calo1_obj = 0;
687        calo2_obj = 0;
688        tof_obj   = 0;
689        trig_obj  = 0;
690        s4_obj    = 0;
691        nd_obj    = 0;
692        ac_obj    = 0;
693        orb_obj   = 0;
694        gp_obj    = 0;
695        //
696        // Reset run pointers
697        //
698        run_obj   = 0;//new GL_RUN();
699        soft_obj   = 0;// Emiliano
700        irun = -1;
701        irunt = -1;
702        runfirstentry = 0ULL;
703        runlastentry = 0ULL;    
704        //
705        totdltime[0] = 0LL;
706        totdltime[1] = 0LL;
707        totdltime[2] = 0LL;
708        //
709    };
710    
711    Bool_t PamLevel2::IsGood(){
712        Bool_t goodev=true;
713        //  if(trk2_obj && trk2_obj->UnpackError() != 0 ) goodev = false;
714        if(calo2_obj && calo2_obj->good != 1) goodev = false;
715        if(tof_obj && tof_obj->unpackError != 0) goodev = false;  
716        if(trig_obj && trig_obj->unpackError != 0) goodev = false;
717        if(s4_obj && s4_obj->unpackError != 0) goodev = false;  
718        if(nd_obj && nd_obj->unpackError != 0) goodev = false;  
719        if(ac_obj && ac_obj->unpackError != 255) goodev = false;  
720        //  if(orb_obj)  
721        return goodev;
722    };
723    
724  //--------------------------------------  //--------------------------------------
725  //  //
# Line 275  void *PamLevel2::GetPointerTo(const char Line 785  void *PamLevel2::GetPointerTo(const char
785          if(!orb_obj)   orb_obj   = new OrbitalInfo();          if(!orb_obj)   orb_obj   = new OrbitalInfo();
786          return &orb_obj;          return &orb_obj;
787      };      };
788        if(!objname.CompareTo("GPamela")){
789            if(!gp_obj)   gp_obj   = new GPamela();
790            return &gp_obj;
791        };
792            
793      if(!objname.CompareTo("RunInfo"))return &run_obj;      if(!objname.CompareTo("RunInfo"))return &run_obj;
794    
# Line 290  void *PamLevel2::GetPointerTo(const char Line 804  void *PamLevel2::GetPointerTo(const char
804   * Retrieves the calorimeter track matching the seqno-th tracker stored track.   * Retrieves the calorimeter track matching the seqno-th tracker stored track.
805   * (If seqno = -1 retrieves the self-trigger calorimeter track)   * (If seqno = -1 retrieves the self-trigger calorimeter track)
806   */   */
807   CaloTrkVar *PamLevel2::GetCaloStoredTrack(int seqno){  CaloTrkVar *PamLevel2::GetCaloStoredTrack(int seqno){
808            
809       if( !calo2_obj )return 0;      if( !calo2_obj )return 0;
810    
811       if( calo2_obj->CaloLevel2::ntrk()==0 ){      if( calo2_obj->CaloLevel2::ntrk()==0 ){
812           cout << "PamLevel2::GetCaloStoredTrack(int) : requested tracker SeqNo "<< seqno <<" but no Calorimeter tracks are stored"<<endl;          cout << "PamLevel2::GetCaloStoredTrack(int) : requested tracker SeqNo "<< seqno <<" but no Calorimeter tracks are stored"<<endl;
813           return NULL;          return NULL;
814       };      };
815            
816       CaloTrkVar *c = 0;      CaloTrkVar *c = 0;
817       Int_t it_calo=0;      Int_t it_calo=0;
818            
819       do{      do{
820           c = calo2_obj->CaloLevel2::GetCaloTrkVar(it_calo);          c = calo2_obj->CaloLevel2::GetCaloTrkVar(it_calo);
821           it_calo++;          it_calo++;
822       } while( c && seqno != c->trkseqno && it_calo < calo2_obj->CaloLevel2::ntrk());          } while( c && seqno != c->trkseqno && it_calo < calo2_obj->CaloLevel2::ntrk());    
823            
824       if(!c || seqno != c->trkseqno){      if(!c || seqno != c->trkseqno){
825           c = 0;          c = 0;
826           if(seqno!=-1)cout << "PamLevel2::GetCaloStoredTrack(int) : requested tracker SeqNo "<< seqno <<" does not match Calorimeter stored tracks"<<endl;          if(seqno!=-1)cout << "PamLevel2::GetCaloStoredTrack(int) : requested tracker SeqNo "<< seqno <<" does not match Calorimeter stored tracks"<<endl;
827       };      };
828       return c;      return c;
829            
830   };  };
831  //--------------------------------------  //--------------------------------------
832   //  //
833   //  //
834  //--------------------------------------  //--------------------------------------
835  /**  /**
836    * Retrieves the ToF track matching the seqno-th tracker stored track.   * Retrieves the ToF track matching the seqno-th tracker stored track.
837    * (If seqno = -1 retrieves the tracker-independent tof track)   * (If seqno = -1 retrieves the tracker-independent tof track)
838   */   */
839   ToFTrkVar *PamLevel2::GetToFStoredTrack(int seqno){  ToFTrkVar *PamLevel2::GetToFStoredTrack(int seqno){
840                    
841       if( !tof_obj )return 0;      if( !tof_obj )return 0;
842    
843       if( tof_obj->ToFLevel2::ntrk()==0 ){      if( tof_obj->ToFLevel2::ntrk()==0 ){
844           cout << "PamLevel2::GetToFStoredTrack(int) : requested tracker SeqNo "<< seqno <<" but no ToF tracks are stored"<<endl;          cout << "PamLevel2::GetToFStoredTrack(int) : requested tracker SeqNo "<< seqno <<" but no ToF tracks are stored"<<endl;
845           return NULL;          return NULL;
846       };      };
847            
848       ToFTrkVar *c = 0;      ToFTrkVar *c = 0;
849       Int_t it_tof=0;      Int_t it_tof=0;
850            
851       do{      do{
852           c = tof_obj->ToFLevel2::GetToFTrkVar(it_tof);          c = tof_obj->ToFLevel2::GetToFTrkVar(it_tof);
853           it_tof++;          it_tof++;
854       } while( c && seqno != c->trkseqno && it_tof < tof_obj->ToFLevel2::ntrk());              } while( c && seqno != c->trkseqno && it_tof < tof_obj->ToFLevel2::ntrk());
855            
856       if(!c || seqno != c->trkseqno){      if(!c || seqno != c->trkseqno){
857           c = 0;          c = 0;
858           if(seqno!=-1)cout << "PamLevel2::GetToFStoredTrack(int) : requested tracker SeqNo "<< seqno <<" does not match ToF stored tracks"<<endl;          if(seqno!=-1)cout << "PamLevel2::GetToFStoredTrack(int) : requested tracker SeqNo "<< seqno <<" does not match ToF stored tracks"<<endl;
859       };      };
860       return c;      return c;
861            
862   };  };
863    
864  //--------------------------------------  //--------------------------------------
865   //  //
866   //  //
867  //--------------------------------------  //--------------------------------------
868  /**  /**
869   * Give the pamela track associated to a tracker track, retrieving related calorimeter and tof track information.   * Give the pamela track associated to a tracker track, retrieving related calorimeter and tof track information.
870   */   */
871   PamTrack* PamLevel2::GetPamTrackAlong(TrkTrack* t){  PamTrack* PamLevel2::GetPamTrackAlong(TrkTrack* t){
872            
873       cout <<"PamLevel2::GetPamTrackAlong(TrkTrack* t) **obsolete** "<<endl;      cout <<"PamLevel2::GetPamTrackAlong(TrkTrack* t) **obsolete** "<<endl;
874       cout <<"(if you use it, remember to delete the PamTrack object)"<<endl;      cout <<"(if you use it, remember to delete the PamTrack object)"<<endl;
875    
876       CaloTrkVar *c = 0;      CaloTrkVar *c = 0;
877       ToFTrkVar  *o = 0;      ToFTrkVar  *o = 0;
878            
879       if(CAL2) c = GetCaloStoredTrack(t->GetSeqNo());      if(CAL2) c = GetCaloStoredTrack(t->GetSeqNo());
880       if(TOF) o = GetToFStoredTrack(t->GetSeqNo());      if(TOF) o = GetToFStoredTrack(t->GetSeqNo());
881            
882  //    if(t && c && o)track = new PamTrack(t,c,o);  //    if(t && c && o)track = new PamTrack(t,c,o);
883       PamTrack *track = new PamTrack(t,c,o);      PamTrack *track = new PamTrack(t,c,o);
884            
885       return track;      return track;
886    
887   };  };
888  //--------------------------------------  //--------------------------------------
889  //  //
890  //  //
# Line 404  PamTrack* PamLevel2::GetStoredTrack(Int_ Line 918  PamTrack* PamLevel2::GetStoredTrack(Int_
918  }  }
919  //--------------------------------------  //--------------------------------------
920  //  //
921    
922    /**
923     * Sort physical (tracker) tracks. Left here as backward compatibility method.
924     **/
925    void PamLevel2::SortTracks(TString how){
926        printf(" WARNING! obsolete, use SortTracks() and SetSortingMethod(TString) instead! \n Setting sorting method to %s \n",how.Data());
927        howtosort = how;  
928        SortTracks();
929    };
930    
931  //  //
932  //--------------------------------------  //--------------------------------------
933  /**  /**
934   * Sort physical (tracker) tracks and stores them in the TRefArray (of TrkTrack objects) which pointer is  PamLevel2::sorted_tracks.   * Sort physical (tracker) tracks.
935   * @param how String to set the sorting cryterium (es: "CAL" or "TRK+CAL+TOF" ecc...).   * @param how String to set the sorting cryterium (es: "CAL" or "TRK+CAL+TOF" ecc...).
936   * Sorting cryteria:   * Sorting cryteria:
937   * TRK: lower chi**2   * TRK: lower chi**2
938   * CAL: lower Y spatial residual on the first calorimeter plane   * CAL: lower Y spatial residual on the first calorimeter plane
939   * TOF: bigger numebr of hit PMTs along the track, on S12 S21 S32 (where paddles are along the Y axis).   * TOF: bigger numebr of hit PMTs along the track, on S12 S21 S32 (where paddles are along the Y axis).
940     * S1: (ask Emiliano)
941     * S2: (ask Emiliano)
942     * S3: (ask Emiliano)
943     * GP: more GP hits
944   * The default sorting cryterium is "TOF+CAL".   * The default sorting cryterium is "TOF+CAL".
945   *   *
946   * The total number of physical tracks is always given by GetNTracks() and the it-th physical track can be retrieved by means of the methods GetTrack(int it) and GetTrack(int it, TString how).   * The total number of physical tracks is always given by GetNTracks() and the it-th physical track can be retrieved by means of the methods GetTrack(int it) and GetTrack(int it, TString how).
947   */   */
948  void PamLevel2::SortTracks(TString how){  void PamLevel2::SortTracks(){
949        TString how = howtosort;
950    
951  //    cout <<" PamLevel2::SortTracks(TString how) "<<endl;      //  cout <<" PamLevel2::SortTracks(TString how) "<<endl;
952      if( !trk2_obj ){      if( !trk2_obj ){
953          cout << "void PamLevel2::SortTracks(TString how):  TrkLevel2 not loaded !!!";          cout << "void PamLevel2::SortTracks():  TrkLevel2 not loaded !!!";
954          return;          return;
955      };      };
956  //    cout << "call SortTracs() "<<endl;      //Save current Object count
   //Save current Object count  
957      Int_t ObjectNumber = TProcessID::GetObjectCount();      Int_t ObjectNumber = TProcessID::GetObjectCount();
958    
959  //    cout << "ObjectNumber  "<<ObjectNumber <<endl;      // create TCloneArrays to store tracks and its images
   
 //     if(!sorted_tracks)sorted_tracks = new TRefArray();  
 //     sorted_tracks->Clear();  
 //    sorted_tracks.Clear();  
   
960      if(!tsorted)tsorted = new TClonesArray("PamTrack",trk2_obj->GetNTracks());      if(!tsorted)tsorted = new TClonesArray("PamTrack",trk2_obj->GetNTracks());
961      tsorted->Delete();      tsorted->Delete();
962      TClonesArray &ttsorted = *tsorted;      TClonesArray &ttsorted = *tsorted;
963    
964      if(!timage)timage = new TClonesArray("PamTrack",trk2_obj->GetNTracks());      if(!timage)timage = new TClonesArray("PamTrack",trk2_obj->GetNTracks());
965      timage->Delete();      timage->Delete();
966      TClonesArray &ttimage = *timage;      TClonesArray &ttimage = *timage;
967    
968    
969      // loop over the tracks sorted by the tracker  
970        //--------------------------------------------------
971        // retrieve sorting method
972        //--------------------------------------------------
973      Bool_t use_TRK = how.Contains("TRK", TString::kIgnoreCase);      Bool_t use_TRK = how.Contains("TRK", TString::kIgnoreCase);
974      Bool_t use_CAL = how.Contains("CAL", TString::kIgnoreCase);      Bool_t use_CAL = how.Contains("CAL", TString::kIgnoreCase);
975      Bool_t use_TOF = how.Contains("TOF", TString::kIgnoreCase);      Bool_t use_TOF = how.Contains("TOF", TString::kIgnoreCase);
976            Bool_t use_S1 = how.Contains("S1", TString::kIgnoreCase);
977        Bool_t use_S2 = how.Contains("S2", TString::kIgnoreCase);
978        Bool_t use_S3 = how.Contains("S3", TString::kIgnoreCase);
979        Bool_t use_GP = how.Contains("GP", TString::kIgnoreCase);
980      
981        if ( use_TOF ){
982            use_S1 = true;
983            use_S2 = true;
984            use_S3 = true;
985        };
986      if( !CAL2 &&  use_CAL) use_CAL = false;      if( !CAL2 &&  use_CAL) use_CAL = false;
987      if( !TOF &&  use_TOF) use_TOF = false;      if( !TOF ){
988                use_TOF = false;
989            use_S1  = false;
990            use_S2  = false;
991            use_S3  = false;
992        }
993        if( !GP ){
994            use_GP  = false;
995        }
996    
997      if( !TRK2 ){      if( !TRK2 ){
998  //      cout << "SortTracks() : without tracker does not work!!! (not yet)" << endl;          cout << "SortTracks() : without tracker does not work!!! (not yet)" << endl;
999          return;          return;
1000      };      };
1001    
1002      //   cout << "use_CAL "<<use_CAL<<" use_TOF "<<use_TOF<<" use_TRK "<<use_TRK <<endl;      //   cout << "use_CAL "<<use_CAL<<" use_TOF "<<use_TOF<<" use_TRK "<<use_TRK <<endl;
1003          
1004    
1005        //--------------------------------------------------
1006        // loop over "physical" tracks sorted by the tracker
1007        //--------------------------------------------------
1008      for(Int_t i=0; i < trk2_obj->TrkLevel2::GetNTracks(); i++){      for(Int_t i=0; i < trk2_obj->TrkLevel2::GetNTracks(); i++){
1009                    
1010          TrkTrack   *ts = 0;          TrkTrack   *ts = 0;
# Line 464  void PamLevel2::SortTracks(TString how){ Line 1012  void PamLevel2::SortTracks(TString how){
1012          ToFTrkVar  *os = 0;          ToFTrkVar  *os = 0;
1013                    
1014          // get tracker tracks          // get tracker tracks
1015          TrkTrack   *tp = trk2_obj->TrkLevel2::GetTrack(i);                    //tracker          TrkTrack   *tp = trk2_obj->TrkLevel2::GetTrack(i); //tracker
1016          CaloTrkVar *cp = GetCaloStoredTrack(tp->GetSeqNo());          CaloTrkVar *cp = GetCaloStoredTrack(tp->GetSeqNo());
1017          ToFTrkVar  *op = GetToFStoredTrack(tp->GetSeqNo());          ToFTrkVar  *op = GetToFStoredTrack(tp->GetSeqNo());
1018    
1019          TrkTrack   *ti = 0;              //tracker (image)          TrkTrack   *ti = 0; //tracker (image)
1020          CaloTrkVar *ci = 0;          CaloTrkVar *ci = 0;
1021          ToFTrkVar  *oi = 0;          ToFTrkVar  *oi = 0;
1022  //      cout << "trk track n. "<<i << " "<<hex<< tp <<dec<< endl;          //      cout << "trk track n. "<<i << " "<<hex<< tp <<dec<< endl;
1023          // if track has an image, check image selection          // if track has an image, check image selection
1024    
1025            Int_t tp_score = 0;  //main track sorted by the tracker
1026            Int_t ti_score = 0;  //image track
1027            Int_t totp_score = 0;  //main track sorted by the tracker
1028            Int_t toti_score = 0;  //image track
1029    
1030          if(tp->HasImage()){          if(tp->HasImage()){
1031                            
1032              ti = trk2_obj->TrkLevel2::GetTrackImage(i);              //tracker (image)              ti = trk2_obj->TrkLevel2::GetTrackImage(i);              //tracker (image)
1033              ci = GetCaloStoredTrack(ti->GetSeqNo());              ci = GetCaloStoredTrack(ti->GetSeqNo());
1034              oi = GetToFStoredTrack(ti->GetSeqNo());              oi = GetToFStoredTrack(ti->GetSeqNo());
1035                            
1036  //          cout << "its image "<<i << " "<<hex<< ti <<dec<< endl;              //      cout << "its image "<<i << " "<<hex<< ti <<dec<< endl;
1037    
1038              //assign starting scores              //assign starting scores
1039              Int_t tp_score = 0;  //main track sorted by the tracker              tp_score = 0;  //main track sorted by the tracker
1040              Int_t ti_score = 0;  //image track              ti_score = 0;  //image track
1041                            
1042              // ------------------------              // -----------------------------------------------------------------------------------------
1043                // *****************************************************************************************
1044                // -----------------------------------------------------------------------------------------
1045              // calorimeter check              // calorimeter check
1046              // ------------------------              // -----------------------------------------------------------------------------------------
             // check the Y spatial residual on the first calorimeter plane  
             // (cut on calorimeter variables from Emiliano)  
1047              if( use_CAL && !calo2_obj ){              if( use_CAL && !calo2_obj ){
1048                  cout << "void PamLevel2::SortTracks(TString how): how= "<<how<<" but CaloLevel2 not loaded !!!";                  cout << "void PamLevel2::SortTracks(): howtosort= "<<how<<" but CaloLevel2 not loaded !!!";
1049                  return;                  return;
1050              };              };
1051                if( use_CAL && !cp &&  ci ){
1052                    ti_score++;
1053                    toti_score++;
1054                };
1055                if( use_CAL &&  cp && !ci ){
1056                    tp_score++;
1057                    totp_score++;
1058                };
1059              if(              if(
1060                  use_CAL            &&                  use_CAL            &&
1061                  calo2_obj->npcfit[1] > 15     &&   //no. of fit planes on Y view                  cp && ci &&
                 calo2_obj->varcfit[1] < 1000. &&  //fit variance on Y view  
1062                  true){                  true){
1063    
1064                                    
1065                  Float_t resy_p = cp->tbar[0][1] - calo2_obj->cbar[0][1]; if(resy_p < 0)resy_p= - resy_p;                  if(
1066                  Float_t resy_i = ci->tbar[0][1] - calo2_obj->cbar[0][1]; if(resy_i < 0)resy_i= - resy_i;                      cp->npresh > ci->npresh &&
1067                                        true){
1068                  if(resy_p <= resy_i) tp_score++;                      tp_score++;
1069                  else                 ti_score++;                      totp_score++;
1070                    };
1071                    if(
1072                        cp->npresh < ci->npresh &&
1073                        true){
1074                        ti_score++;
1075                        toti_score++;
1076                    };
1077    
1078  //              cout << "CALO "<<tp_score<<ti_score<<endl;                  //      cout << "CALO "<<tp_score<<ti_score<<endl;
1079    
1080              };              };
1081              // ------------------------              // -----------------------------------------------------------------------------------------
1082                // *****************************************************************************************
1083                // -----------------------------------------------------------------------------------------
1084              // TOF check              // TOF check
1085              // ------------------------                  // -----------------------------------------------------------------------------------------
1086              // check the number of hit pmts along the track              // check the number of hit pmts along the track
1087              // on S12 S21 and S32, where paddles are parallel to Y axis              // on S12 S21 and S32, where paddles are parallel to Y axis
1088              if( use_TOF && !tof_obj ){              if( (use_TOF || use_S1 || use_S2 || use_S3 ) && !tof_obj ){
1089                  cout << "void PamLevel2::SortTracks(TString how): how= "<<how<<" but ToFLevel2 not loaded !!!";                  cout << "void PamLevel2::SortTracks(): howtosort= "<<how<<" but ToFLevel2 not loaded !!!";
1090                  return;                  return;
1091              };              };
1092              if( use_TOF ){              //
1093                                if( (use_TOF || use_S1 || use_S2 || use_S3 ) && !op && oi ){
1094                  Int_t nphit_p =0;                  ti_score++;
1095                  Int_t nphit_i =0;                  toti_score++;
1096                                };
1097                                if( (use_TOF || use_S1 || use_S2 || use_S3 ) && op && !oi ){
1098  /*                              cout << "track: npmtadc "<< op->npmtadc << endl;                  tp_score++;
1099                                  cout << "track: npmttdc "<< op->npmttdc << endl;                  totp_score++;
1100                                  cout << "image: npmtadc "<< oi->npmtadc << endl;              };
1101                                  cout << "image: npmttdc "<< oi->npmttdc << endl;*/              if( (use_TOF || use_S1 || use_S2 || use_S3 ) && op && oi ){
1102                                    //
1103                    Float_t sen = 0.;
1104                  for (Int_t ih=0; ih < op->npmtadc; ih++){                  for (Int_t ih=0; ih < op->npmtadc; ih++){
1105                      Int_t pl = tof_obj->GetPlaneIndex( (op->pmtadc).At(ih) );                      Int_t pl = tof_obj->GetPlaneIndex( (op->pmtadc).At(ih) );
1106                      if(pl == 1 || pl == 2 || pl == 5)nphit_p++;                      if ( pl == 2 || pl == 3 || pl == 4 || pl == 5 ) sen += (op->dedx).At(ih);
1107                  };                  };
                   
1108                  for (Int_t ih=0; ih < oi->npmtadc; ih++){                  for (Int_t ih=0; ih < oi->npmtadc; ih++){
1109                      Int_t pl = tof_obj->GetPlaneIndex( (oi->pmtadc).At(ih) );                      Int_t pl = tof_obj->GetPlaneIndex( (oi->pmtadc).At(ih) );
1110                      if(pl == 1 || pl == 2 || pl == 5)nphit_i++;                      if ( pl == 2 || pl == 3 || pl == 4 || pl == 5 ) sen += (oi->dedx).At(ih);
1111                  };                  };
1112                    //
1113                    if (  sen >= sortthr && false){ // temporary disabled NUCLEI special algorithm since the new one should work for every particle (to be checked!)
1114                        //printf(" IS A NUCLEUS! en = %f \n",sen);
1115                        //
1116                        // is a nucleus use a different algorithm
1117                        //
1118                        Int_t nz = 6; Float_t zin[6];                                          // << define TOF z-coordinates
1119                        for(Int_t ip=0; ip<nz; ip++)
1120                            zin[ip] = tof_obj->ToFLevel2::GetZTOF(tof_obj->ToFLevel2::GetToFPlaneID(ip));     // << read ToF plane z-coordinates
1121                        Trajectory *tr = new Trajectory(nz,zin);
1122                        //
1123                        Int_t nphit_p =0;
1124                        Int_t nphit_i =0;
1125                        Float_t enhit_p = 0.;
1126                        Float_t enhit_i = 0.;
1127                        //
1128                        for (Int_t ih=0; ih < op->npmtadc; ih++){
1129                            Int_t pl = tof_obj->GetPlaneIndex( (op->pmtadc).At(ih) );
1130                            if(pl == 1 || pl == 2 || pl == 5){
1131                                nphit_p++;
1132                                enhit_p += (op->dedx).At(ih);
1133                            };
1134                        };
1135                        //
1136                        tp->DoTrack2(tr);
1137                        //
1138                        if ( fabs(tr->y[0]-oi->ytofpos[0]) < 2. ){
1139                            for (Int_t ih=0; ih < op->npmtadc; ih++){
1140                                Int_t pl = tof_obj->GetPlaneIndex( (op->pmtadc).At(ih) );
1141                                if(pl == 0){
1142                                    nphit_p++;
1143                                    enhit_p += (op->dedx).At(ih);
1144                                };
1145                            };
1146                        };
1147                        if ( fabs(tr->y[3]-oi->ytofpos[1]) < 2. ){
1148                            for (Int_t ih=0; ih < op->npmtadc; ih++){
1149                                Int_t pl = tof_obj->GetPlaneIndex( (op->pmtadc).At(ih) );
1150                                if(pl == 3){
1151                                    nphit_p++;
1152                                    enhit_p += (op->dedx).At(ih);
1153                                };
1154                            };
1155                        };
1156                        if ( fabs(tr->y[4]-oi->ytofpos[2]) < 2. ){
1157                            for (Int_t ih=0; ih < op->npmtadc; ih++){
1158                                Int_t pl = tof_obj->GetPlaneIndex( (op->pmtadc).At(ih) );
1159                                if(pl == 4){
1160                                    nphit_p++;
1161                                    enhit_p += (op->dedx).At(ih);
1162                                };
1163                            };
1164                        };
1165    
1166                        for (Int_t ih=0; ih < oi->npmtadc; ih++){
1167                            Int_t pl = tof_obj->GetPlaneIndex( (oi->pmtadc).At(ih) );
1168                            if(pl == 1 || pl == 2 || pl == 5){
1169                                nphit_i++;  
1170                                enhit_i += (op->dedx).At(ih);
1171                            };
1172                        };
1173                        //
1174                        ti->DoTrack2(tr);
1175                        //
1176                        if ( fabs(tr->y[0]-oi->ytofpos[0]) < 2. ){
1177                            for (Int_t ih=0; ih < oi->npmtadc; ih++){
1178                                Int_t pl = tof_obj->GetPlaneIndex( (oi->pmtadc).At(ih) );
1179                                if(pl == 0){
1180                                    nphit_i++;
1181                                    enhit_i += (op->dedx).At(ih);
1182                                };
1183                            };
1184                        };
1185                        if ( fabs(tr->y[3]-oi->ytofpos[1]) < 2. ){
1186                            for (Int_t ih=0; ih < oi->npmtadc; ih++){
1187                                Int_t pl = tof_obj->GetPlaneIndex( (oi->pmtadc).At(ih) );
1188                                if(pl == 3){
1189                                    nphit_i++;
1190                                    enhit_i += (op->dedx).At(ih);
1191                                };
1192                            };
1193                        };
1194                        if ( fabs(tr->y[4]-oi->ytofpos[2]) < 2. ){
1195                            for (Int_t ih=0; ih < oi->npmtadc; ih++){
1196                                Int_t pl = tof_obj->GetPlaneIndex( (oi->pmtadc).At(ih) );
1197                                if(pl == 4){
1198                                    nphit_i++;
1199                                    enhit_i += (op->dedx).At(ih);
1200                                };
1201                            };
1202                        };          
1203    
1204                                    
1205                  if(                      if(
1206                      use_TOF            &&                          (use_TOF || use_S1 || use_S2 || use_S3)            &&
1207                      (nphit_p+nphit_i) !=0 &&                              (nphit_p+nphit_i) !=0 &&        
1208                      true){                          true){
1209                        
1210                            //          printf(" seqno %i nphit_p %i nphit_i %i enhit_p %f enhit_i %f \n",trk2_obj->TrkLevel2::GetSeqNo(i),nphit_p,nphit_i,enhit_p,enhit_i);
1211                            //          printf(" score p %i score i %i \n",tp_score,ti_score);
1212                            //                if( enhit_p > enhit_i ) tp_score++;
1213                            //                if( nphit_p >= nphit_i && enhit_p > enhit_i ) tp_score++;
1214                            if ( nphit_p > nphit_i ) tp_score++;
1215                            if ( nphit_p < nphit_i ) ti_score++;
1216                            if ( nphit_p == nphit_i ){
1217                                if ( enhit_p > enhit_i ) tp_score++;
1218                                else ti_score++;
1219                            };
1220                            //          printf(" dopo score p %i score i %i \n",tp_score,ti_score);
1221                        };
1222                        delete tr;
1223                        //
1224                    } else {
1225                        // -------------
1226                        // NOT a NUCLEUS
1227                        // -------------
1228                        //printf(" NOT a NUCLEUS! en = %f \n",sen);
1229    
1230                        Int_t nphit_p =0;
1231                        Int_t nphit_i =0;
1232                    
1233                    
1234                        /*                          cout << "track: npmtadc "<< op->npmtadc << endl;
1235                                                    cout << "track: npmttdc "<< op->npmttdc << endl;
1236                                                    cout << "image: npmtadc "<< oi->npmtadc << endl;
1237                                                    cout << "image: npmttdc "<< oi->npmttdc << endl;*/
1238                    
1239    //        for (Int_t ih=0; ih < op->npmtadc; ih++){
1240    //          Int_t pl = tof_obj->GetPlaneIndex( (op->pmtadc).At(ih) );
1241    //          if(pl == 1 || pl == 2 || pl == 5)nphit_p++;
1242    //        };
1243                    
1244    //        for (Int_t ih=0; ih < oi->npmtadc; ih++){
1245    //          Int_t pl = tof_obj->GetPlaneIndex( (oi->pmtadc).At(ih) );
1246    //          if(pl == 1 || pl == 2 || pl == 5)nphit_i++;
1247    //        };
1248                        // --- modified to count tdc signals (more efficient?)
1249                        // --- and to implement check on tdcflag
1250                        for (Int_t ih=0; ih < op->npmttdc; ih++){
1251                            Int_t pl = tof_obj->GetPlaneIndex( (op->pmttdc).At(ih) );
1252    //          if( (op->tdcflag).At(ih)==0 && (pl == 1 || pl == 2 || pl == 5) )nphit_p++;
1253                            if ( (use_S1 && ( pl == 0 || pl == 1 )) || (use_S2 && ( pl == 2 || pl == 3 )) || (use_S3 && ( pl == 4 || pl == 5 )) ){
1254                                if( (op->tdcflag).At(ih)==0 )nphit_p++;
1255                            };
1256                        };
1257                    
1258                        for (Int_t ih=0; ih < oi->npmttdc; ih++){
1259                            Int_t pl = tof_obj->GetPlaneIndex( (oi->pmttdc).At(ih) );
1260    //          if( (oi->tdcflag).At(ih)==0 && (pl == 1 || pl == 2 || pl == 5) )nphit_i++;  
1261                            if ( (use_S1 && ( pl == 0 || pl == 1 )) || (use_S2 && ( pl == 2 || pl == 3 )) || (use_S3 && ( pl == 4 || pl == 5 )) ){
1262                                if( (oi->tdcflag).At(ih)==0 )nphit_i++;    
1263                            };
1264                        };
1265                    
1266                        if(
1267                            (nphit_p+nphit_i) !=0 &&        
1268                            true){
1269                                            
1270                      if( nphit_p >= nphit_i) tp_score++;                          if ( nphit_p != nphit_i ){
1271                      else ti_score++;                              totp_score += nphit_p;
1272                                toti_score += nphit_i;
1273                                tp_score+=nphit_p;
1274                                ti_score+=nphit_i;
1275                            };
1276                            //          if     ( nphit_p > nphit_i) tp_score+=nphit_p;
1277                            //          else if( nphit_p < nphit_i) ti_score+=nphit_i;
1278                            //          else ;//niente
1279                        };
1280                  };                  };
1281  //              cout << "TOF "<<tp_score<<ti_score<<endl;                  //      cout << "TOF "<<tp_score<<ti_score<<endl;
1282              };              };
1283              if(tp_score == ti_score) use_TRK = true;  
1284              // ------------------------  
1285    //      if(tp_score == ti_score) use_TRK = true;
1286    
1287    
1288                // -----------------------------------------------------------------------------------------
1289                // *****************************************************************************************
1290                // -----------------------------------------------------------------------------------------
1291              // tracker check              // tracker check
1292              // ------------------------              // -----------------------------------------------------------------------------------------
1293              // chi**2 difference is not always large enough to distinguish among              // chi**2 difference is not always large enough to distinguish among
1294              // the real track and its image.              // the real track and its image.
1295              // Tracker check will be applied always when calorimeter and tof information is ambiguous.              // Tracker check will be applied always when calorimeter and tof information is ambiguous.
1296                // *** MODIFIED ON AUGUST 2007 ***
1297              if(use_TRK){              if(use_TRK){
1298                  if(      tp->chi2 > 0 && tp->chi2 < ti->chi2 ) tp_score++ ;  //      if(      tp->chi2 > 0 && tp->chi2 < ti->chi2 ) tp_score++ ;
1299                  else if( ti->chi2 > 0 && ti->chi2 < tp->chi2 ) ti_score++ ;  //      else if( ti->chi2 > 0 && ti->chi2 < tp->chi2 ) ti_score++ ;
1300  //              cout << "TRK "<<tp_score<<ti_score<<endl;  
1301                    // CHECK 1 : number of points along X  
1302                    if ( tp->GetNX() >= ti->GetNX() ){
1303                        tp_score++ ;
1304                        totp_score++ ;
1305                    };
1306                    if ( tp->GetNX() <= ti->GetNX() ){
1307                        ti_score++ ;
1308                        toti_score++ ;
1309                    };
1310                    // CHECK 2 : number of points along Y  
1311                    if ( tp->GetNY() >= ti->GetNY() ){
1312                        tp_score++ ;
1313                        totp_score++ ;
1314                    };
1315                    if ( tp->GetNY() <= ti->GetNY() ){
1316                        ti_score++ ;
1317                        toti_score++ ;
1318                    };
1319    
1320                    //      cout << "TRK "<<tp_score<<ti_score<<endl;
1321              };              };
1322                            
1323              // ------------------------  
1324                // -----------------------------------------------------------------------------------------
1325                // *****************************************************************************************
1326                // -----------------------------------------------------------------------------------------
1327                // GPamela check
1328                // -----------------------------------------------------------------------------------------
1329                
1330                //---------------------------------------------------
1331                // count the number of GP hits
1332                //---------------------------------------------------
1333                if(use_GP){
1334                    int ngphits_p=0;
1335                    int ngphits_i=0;
1336                    float toll = 0.02; //200 micron
1337                    for(int ih=0; ih<GetGPamela()->Nthspe; ih++){
1338                        int ip = (Int_t) GetGPamela()->Itrpb[ih] - 1;
1339                        if(
1340                            tp &&
1341                            tp->YGood(ip) &&
1342                            fabs(tp->ym[ip]- GetGPamela()->Yavspe[ih])<toll &&
1343                            true) ngphits_p++;
1344                        if( ti &&
1345                            ti->YGood(ip) &&
1346                            fabs(ti->ym[ip]- GetGPamela()->Yavspe[ih])<toll &&
1347                            true) ngphits_i++;
1348                    }
1349                    if(
1350                        ngphits_p > ngphits_i &&
1351                        true){
1352                        tp_score++ ;
1353                        totp_score++ ;                  
1354                    }
1355                    if(
1356                        ngphits_p < ngphits_i &&
1357                        true){
1358                        ti_score++ ;
1359                        toti_score++ ;                  
1360                    }
1361                }
1362    
1363    
1364                // *-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*
1365              // the winner is....              // the winner is....
1366              // ------------------------                  // *-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*
1367              if      (tp_score > ti_score) {              if      (tp_score > ti_score) {
1368  //              ts = tp;//the track sorted by the tracker!!          
1369  //              cs = cp;  
 //              os = op;  
1370              }else if (tp_score < ti_score) {              }else if (tp_score < ti_score) {
1371    
1372    
1373                  ts = ti;//its image!!                  ts = ti;//its image!!
1374                  cs = ci;                  cs = ci;
1375                  os = oi;                  os = oi;
1376                    Int_t totis = toti_score;
1377    
1378                  ti = tp;//its image!!                  ti = tp;//its image!!
1379                  ci = cp;                  ci = cp;
# Line 583  void PamLevel2::SortTracks(TString how){ Line 1383  void PamLevel2::SortTracks(TString how){
1383                  cp = cs;                  cp = cs;
1384                  op = os;                  op = os;
1385    
1386                    toti_score = totp_score;
1387                    totp_score = totis;
1388    
1389                                    
1390              }else {              }else {
1391  //              ts = tp;  
1392  //              cs = cp;  //      cout << "Warning - track image ambiguity not solved" << endl;
1393  //              os = op;  
 //                              cout << "Warning - track image ambiguity not solved" << endl;  
 //                              cout << ts->GetNtot() << " "<< ts->chi2 << " " << npcfit[1] << " "<< nphit_p << endl;  
1394              };              };
1395                            
1396          }else{          }else{
1397  //          ts = tp;              totp_score = 1;
1398  //          cs = cp;              toti_score = 0;
1399  //          os = op;        
1400                //      ts = tp;
1401                //      cs = cp;
1402                //      os = op;
1403          };          };
1404                    
1405  //      cout <<" SortTracks() "<<i<<" -- "<<ts<<endl;          //      cout <<" SortTracks() "<<i<<" -- "<<ts<<endl;
1406  //      sorted_tracks->Add(ts);//save the track in the sorted array          //      sorted_tracks->Add(ts);//save the track in the sorted array
1407  //      sorted_tracks.Add(ts);//save the track in the sorted array          //      sorted_tracks.Add(ts);//save the track in the sorted array
1408  //      sorted_tracks.Add(tp);//save the track in the sorted array          //      sorted_tracks.Add(tp);//save the track in the sorted array
1409  //      cout << "SortTracks:: sorted_tracks->Add(it) "<<i<<" "<<ts<<endl;          //      cout << "SortTracks:: sorted_tracks->Add(it) "<<i<<" "<<ts<<endl;
1410  //      cout<<"o "<<tp<<endl;          //      cout<<"o "<<tp<<endl;
1411  //      cout<<"o "<<cp<<endl;          //      cout<<"o "<<cp<<endl;
1412  //      cout<<"o "<<op<<endl;          //      cout<<"o "<<op<<endl;
1413    
1414          new(ttsorted[i]) PamTrack(tp,cp,op);          new(ttsorted[i]) PamTrack(tp,cp,op);
1415          new(ttimage[i])  PamTrack(ti,ci,oi);          new(ttimage[i])  PamTrack(ti,ci,oi);
1416    
1417            ((PamTrack*)(ttsorted[i]))->SetPScore(totp_score);
1418            ((PamTrack*)(ttsorted[i]))->SetIScore(toti_score);
1419            ((PamTrack*)(ttimage[i]))->SetPScore(totp_score);
1420            ((PamTrack*)(ttimage[i]))->SetIScore(toti_score);
1421      };      };
1422    
1423      if( tsorted->GetEntries() != trk2_obj->GetNTracks() ){      if( tsorted->GetEntries() != trk2_obj->GetNTracks() ){
1424          cout << "void PamLevel2::SortTracks(TString how): tsorted->GetEntries() "<<tsorted->GetEntries()<<" != trk2_obj->GetNTracks() = "<<trk2_obj->GetNTracks() <<endl;          cout << "void PamLevel2::SortTracks(): tsorted->GetEntries() "<<tsorted->GetEntries()<<" != trk2_obj->GetNTracks() = "<<trk2_obj->GetNTracks() <<endl;
1425          tsorted->Delete(); tsorted=0;          tsorted->Delete(); tsorted=0;
1426          timage->Delete(); timage=0;              timage->Delete(); timage=0;    
1427      }      }
# Line 643  void PamLevel2::SortTracks(TString how){ Line 1453  void PamLevel2::SortTracks(TString how){
1453  TClonesArray *PamLevel2::GetTracks(){  TClonesArray *PamLevel2::GetTracks(){
1454    
1455  //  *-*-*-*-*-*-*-*-*-*-*-*-*  //  *-*-*-*-*-*-*-*-*-*-*-*-*
1456      SortTracks("+CAL+TOF");      SortTracks();
1457  //  *-*-*-*-*-*-*-*-*-*-*-*-*  //  *-*-*-*-*-*-*-*-*-*-*-*-*
1458    
1459      return tsorted;      return tsorted;
1460            
1461   };  };
1462  //--------------------------------------  //--------------------------------------
1463   //  //
1464   //  //
1465  //--------------------------------------  //--------------------------------------
1466  /**  /**
1467   * Retrieves the it-th Pamela "physical" track.   * Retrieves the it-th Pamela "physical" track.
# Line 662  PamTrack *PamLevel2::GetTrack(int it){ Line 1472  PamTrack *PamLevel2::GetTrack(int it){
1472    
1473  //    if(!trk2_obj) return 0;  //    if(!trk2_obj) return 0;
1474                    
1475  // //  *-*-*-*-*-*-*-*-*-*-*-*-*  // //  *-*-*-*+-*-*-*-*-*-*-*-*-*
1476  //     SortTracks("+CAL+TOF");  //     SortTracks("+CAL+TOF");
1477  // //  *-*-*-*-*-*-*-*-*-*-*-*-*  // //  *-*-*-*-*-*-*-*-*-*-*-*-*
1478  // //    if(!sorted_tracks)return 0;  // //    if(!sorted_tracks)return 0;
# Line 681  PamTrack *PamLevel2::GetTrack(int it){ Line 1491  PamTrack *PamLevel2::GetTrack(int it){
1491    
1492  //    cout << "PamLevel2::GetTrack(int it) "<<endl;  //    cout << "PamLevel2::GetTrack(int it) "<<endl;
1493  //  *-*-*-*-*-*-*-*-*-*-*-*-*  //  *-*-*-*-*-*-*-*-*-*-*-*-*
1494      SortTracks("+CAL+TOF");      SortTracks();
1495  //  *-*-*-*-*-*-*-*-*-*-*-*-*  //  *-*-*-*-*-*-*-*-*-*-*-*-*
1496      if(!tsorted)return 0;      if(!tsorted)return 0;
1497      if(!tsorted->GetEntries())return 0;      if(!tsorted->GetEntries())return 0;
# Line 738  PamTrack *PamLevel2::GetTrackImage(int i Line 1548  PamTrack *PamLevel2::GetTrackImage(int i
1548    
1549    
1550  //  *-*-*-*-*-*-*-*-*-*-*-*-*  //  *-*-*-*-*-*-*-*-*-*-*-*-*
1551      SortTracks("+CAL+TOF");      SortTracks();
1552  //  *-*-*-*-*-*-*-*-*-*-*-*-*  //  *-*-*-*-*-*-*-*-*-*-*-*-*
1553      if(!timage)return 0;      if(!timage)return 0;
1554      if(!timage->GetEntries())return 0;      if(!timage->GetEntries())return 0;
# Line 773  PamTrack *PamLevel2::GetTrackImage(int i Line 1583  PamTrack *PamLevel2::GetTrackImage(int i
1583   */   */
1584  TTree *PamLevel2::GetPamTree(TFile *f, TString detlist ){  TTree *PamLevel2::GetPamTree(TFile *f, TString detlist ){
1585    
1586  //     if( !detlist.IsNull() ) SetWhichTrees(detlist);      if( detlist.Contains("+AUTO", TString::kIgnoreCase) ) {
1587  //     else                    GetWhichTrees(f);          cout << "+AUTO"<<endl;
1588            GetWhichTrees(f);
1589        };
1590      SetWhichTrees(detlist);      SetWhichTrees(detlist);
1591    
1592        if ( pam_tree ){
1593            printf("WARNING: TTree *PamLevel2::GetPamTree(TFile *fl, TString detlist) -- pam_tree already exists!\n ");
1594            return pam_tree;
1595        };
1596        //
1597    
1598        cout << "TTree *PamLevel2::GetPamTree(TFile *f, TString detlist ) -- obsolte "<<endl;
1599    
1600    //    SetWhichTrees(detlist);
1601    
1602      TTree *Trout =0;      TTree *Trout =0;
1603    
1604      TString fname = f->GetName();      TString fname = f->GetName();
1605      if(!CheckLevel2File(fname))return NULL;      if(!CheckLevel2File(fname))return NULL;
1606    
1607      UInt_t *found=0;      //    UInt_t *found=0;    
1608    
1609      cout<< "GetPamTree(TFile*,TString): detector list --> ";      cout<< "GetPamTree(TFile*,TString): detector list --> ";
1610      if(TRK1)cout<<"TRK1 ";      if(TRK1)cout<<"TRK1 ";
# Line 796  TTree *PamLevel2::GetPamTree(TFile *f, T Line 1618  TTree *PamLevel2::GetPamTree(TFile *f, T
1618      if(ND)cout<<"ND ";      if(ND)cout<<"ND ";
1619      if(S4)cout<<"S4 ";      if(S4)cout<<"S4 ";
1620      if(ORB)cout<<"ORB ";      if(ORB)cout<<"ORB ";
1621        if(GP)cout<<"GP ";
1622      cout << endl;      cout << endl;
1623        if(SELLI)cout<<">>> Found selection-list <<<"<<endl;
1624    
1625      f->cd();      f->cd();
1626    
# Line 804  TTree *PamLevel2::GetPamTree(TFile *f, T Line 1628  TTree *PamLevel2::GetPamTree(TFile *f, T
1628      TTree *T = (TTree*)f->Get("Tracker");      TTree *T = (TTree*)f->Get("Tracker");
1629      if(T && (TRK2||TRK1||TRKh)) {      if(T && (TRK2||TRK1||TRKh)) {
1630          if(TRK2)T->SetBranchAddress("TrkLevel2", GetPointerTo("TrkLevel2"));          if(TRK2)T->SetBranchAddress("TrkLevel2", GetPointerTo("TrkLevel2"));
1631          else    T->SetBranchStatus("TrkLevel2",0,found);  //      else    T->SetBranchStatus("TrkLevel2",0,found);
1632          if(TRK2)cout << "Tracker      : set branch address TrkLevel2"<<endl;          if(TRK2)cout << "Tracker      : set branch address TrkLevel2"<<endl;
1633          if(TRK1)T->SetBranchAddress("TrkLevel1", GetPointerTo("TrkLevel1"));          if(TRK1)T->SetBranchAddress("TrkLevel1", GetPointerTo("TrkLevel1"));
1634          else    T->SetBranchStatus("TrkLevel1",0,found);  //      else    T->SetBranchStatus("TrkLevel1",0,found);
1635          if(TRK1)cout << "Tracker      : set branch address TrkLevel1"<<endl;          if(TRK1)cout << "Tracker      : set branch address TrkLevel1"<<endl;
1636          if(TRKh)T->SetBranchAddress("TrkHough", GetPointerTo("TrkHough"));          if(TRKh)T->SetBranchAddress("TrkHough", GetPointerTo("TrkHough"));
1637          else    T->SetBranchStatus("TrkHough",0,found);  //      else    T->SetBranchStatus("TrkHough",0,found);
1638          if(TRKh)cout << "Tracker      : set branch address TrkHough"<<endl;          if(TRKh)cout << "Tracker      : set branch address TrkHough"<<endl;
1639          if(!Trout)Trout=T;          if(!Trout)Trout=T;
1640          else Trout->AddFriend(T);          else Trout->AddFriend(T);
# Line 821  TTree *PamLevel2::GetPamTree(TFile *f, T Line 1645  TTree *PamLevel2::GetPamTree(TFile *f, T
1645      TTree *C = (TTree*)f->Get("Calorimeter");      TTree *C = (TTree*)f->Get("Calorimeter");
1646      if(C && (CAL2||CAL1)) {      if(C && (CAL2||CAL1)) {
1647          if(CAL2)C->SetBranchAddress("CaloLevel2", GetPointerTo("CaloLevel2"));          if(CAL2)C->SetBranchAddress("CaloLevel2", GetPointerTo("CaloLevel2"));
1648          else    C->SetBranchStatus("CaloLevel2",0,found);  //      else    C->SetBranchStatus("CaloLevel2",0,found);
1649          if(CAL2)cout << "Calorimeter  : set branch address CaloLevel2"<<endl;          if(CAL2)cout << "Calorimeter  : set branch address CaloLevel2"<<endl;
1650          if(CAL1)C->SetBranchAddress("CaloLevel1", GetPointerTo("CaloLevel1"));          if(CAL1)C->SetBranchAddress("CaloLevel1", GetPointerTo("CaloLevel1"));
1651          else    C->SetBranchStatus("CaloLevel1",0,found);  //      else    C->SetBranchStatus("CaloLevel1",0,found);
1652          if(CAL1)cout << "Calorimeter  : set branch address CaloLevel1"<<endl;          if(CAL1)cout << "Calorimeter  : set branch address CaloLevel1"<<endl;
1653          if(!Trout)Trout=C;          if(!Trout)Trout=C;
1654          else Trout->AddFriend(C);          else Trout->AddFriend(C);
# Line 847  TTree *PamLevel2::GetPamTree(TFile *f, T Line 1671  TTree *PamLevel2::GetPamTree(TFile *f, T
1671      if(R && TRG) {      if(R && TRG) {
1672          R->SetBranchAddress("TrigLevel2", GetPointerTo("TrigLevel2"));          R->SetBranchAddress("TrigLevel2", GetPointerTo("TrigLevel2"));
1673          cout << "Trigger      : set branch address TrigLevel2"<<endl;          cout << "Trigger      : set branch address TrigLevel2"<<endl;
1674          if(!Trout)Trout=O;          if(!Trout)Trout=R;
1675          else Trout->AddFriend(R);          else Trout->AddFriend(R);
1676      }else{      }else{
1677          cout << "Trigger      : missing tree"<<endl;          cout << "Trigger      : missing tree"<<endl;
# Line 857  TTree *PamLevel2::GetPamTree(TFile *f, T Line 1681  TTree *PamLevel2::GetPamTree(TFile *f, T
1681      if(S && S4) {      if(S && S4) {
1682          S->SetBranchAddress("S4Level2", GetPointerTo("S4Level2"));          S->SetBranchAddress("S4Level2", GetPointerTo("S4Level2"));
1683          cout << "S4           : set branch address S4Level2"<<endl;          cout << "S4           : set branch address S4Level2"<<endl;
1684          if(!Trout)Trout=O;          if(!Trout)Trout=S;
1685          else Trout->AddFriend(S);          else Trout->AddFriend(S);
1686      }else{      }else{
1687          cout << "S4           : missing tree"<<endl;          cout << "S4           : missing tree"<<endl;
# Line 867  TTree *PamLevel2::GetPamTree(TFile *f, T Line 1691  TTree *PamLevel2::GetPamTree(TFile *f, T
1691      if(N && ND) {      if(N && ND) {
1692          N->SetBranchAddress("NDLevel2", GetPointerTo("NDLevel2"));          N->SetBranchAddress("NDLevel2", GetPointerTo("NDLevel2"));
1693          cout << "NeutronD     : set branch address NDLevel2"<<endl;          cout << "NeutronD     : set branch address NDLevel2"<<endl;
1694          if(!Trout)Trout=O;          if(!Trout)Trout=N;
1695          else Trout->AddFriend(N);          else Trout->AddFriend(N);
1696      }else{      }else{
1697          cout << "NeutronD     : missing tree"<<endl;          cout << "NeutronD     : missing tree"<<endl;
# Line 877  TTree *PamLevel2::GetPamTree(TFile *f, T Line 1701  TTree *PamLevel2::GetPamTree(TFile *f, T
1701      if(A && AC) {      if(A && AC) {
1702          A->SetBranchAddress("AcLevel2", GetPointerTo("AcLevel2"));          A->SetBranchAddress("AcLevel2", GetPointerTo("AcLevel2"));
1703          cout << "Anticounter  : set branch address AcLevel2"<<endl;          cout << "Anticounter  : set branch address AcLevel2"<<endl;
1704          if(!Trout)Trout=O;          if(!Trout)Trout=A;
1705          else Trout->AddFriend(A);          else Trout->AddFriend(A);
1706      }else{      }else{
1707          cout << "Anticounter  : missing tree"<<endl;          cout << "Anticounter  : missing tree"<<endl;
# Line 887  TTree *PamLevel2::GetPamTree(TFile *f, T Line 1711  TTree *PamLevel2::GetPamTree(TFile *f, T
1711      if(B && ORB) {      if(B && ORB) {
1712          B->SetBranchAddress("OrbitalInfo", GetPointerTo("OrbitalInfo"));          B->SetBranchAddress("OrbitalInfo", GetPointerTo("OrbitalInfo"));
1713          cout << "OrbitalInfo  : set branch address OrbitalInfo"<<endl;          cout << "OrbitalInfo  : set branch address OrbitalInfo"<<endl;
1714          if(!Trout)Trout=O;          if(!Trout)Trout=B;
1715          else Trout->AddFriend(B);          else Trout->AddFriend(B);
1716      }else{      }else{
1717          cout << "OrbitalInfo  : missing tree"<<endl;          cout << "OrbitalInfo  : missing tree"<<endl;
1718      };      };
1719    
1720        // GPamela
1721        TTree *G = (TTree*)f->Get("h20");
1722        if(G && GP) {
1723            if(!gp_obj)gp_obj=new GPamela();
1724    //      ------------------------------------
1725    //      ATTENZIONE!!!
1726    //      non so per quale arcano motivo,
1727    //      per l'albero di gpamela il branch address lo devo settare
1728    //      DOPO aver fatto friend
1729    //      FGRRRVZZZZUTSALKJMSLKJ!!!
1730    //      ------------------------------------
1731    //      gp_obj->SetBranchAddress(G); //ho dovuto fare in maniera diversa dagli altri
1732    //      cout << "h20          : set branch address GPamela "<<endl;
1733            if(!Trout)Trout=G;
1734            else Trout->AddFriend(G);
1735        }else{
1736    //      cout << "h20          : missing tree"<<endl;
1737        };
1738    
1739    
1740        TTree *L = (TTree*)f->Get("SelectionList");
1741        if(L && SELLI==1) {
1742            cout << " TTree *PamLevel2::GetPamTree(TFile, TString) >>> SelectionList not implemented!!!!"<<endl;
1743            sel_tree = 0;
1744        }else{
1745            cout << "SelectionList  : missing tree"<<endl;
1746        };
1747            
1748      cout<<endl<<" Number of entries: "<<Trout->GetEntries()<<endl<<endl;      cout<<endl<<" Number of entries: "<<Trout->GetEntries()<<endl<<endl;
1749    
1750    //      ------------------------------------
1751    //      ATTENZIONE!!!
1752    //      non so per quale arcano motivo,
1753    //      per l'albero di gpamela il branch address lo devo settare
1754    //      DOPO aver fatto friend
1755    //      FGRRRVZZZZUTSALKJMSLKJ!!!
1756    //      ------------------------------------
1757        if(G && GP) {      
1758            gp_obj->SetBranchAddress(Trout); //ho dovuto fare in maniera diversa dagli altri
1759            cout << "h20          : set branch address GPamela "<<endl;
1760        }else{
1761            cout << "h20          : missing tree"<<endl;
1762        };
1763    
1764        pam_tree = (TChain*)Trout;
1765            
1766      return Trout;      return Trout;
1767            
# Line 913  TList*  PamLevel2::GetListOfLevel2Files( Line 1781  TList*  PamLevel2::GetListOfLevel2Files(
1781                    
1782      TString wdir = gSystem->WorkingDirectory();      TString wdir = gSystem->WorkingDirectory();
1783            
1784      if(ddir=="")ddir = wdir;      //    if(ddir=="")ddir = wdir;
1785  //      TSystemDirectory *datadir = new TSystemDirectory(gSystem->BaseName(ddir),ddir);  //      TSystemDirectory *datadir = new TSystemDirectory(gSystem->BaseName(ddir),ddir);
1786      cout << "Level2 data directory : "<<  ddir << endl;      if ( ddir != ""){
1787                cout << "Level2 data directory : "<<  ddir << endl;
1788        } else {
1789            cout << "Level2 data directory not given as input: trying to evaluate from list or taking working directory " << endl;
1790        };
1791      TList *contents  = new TList; // create output list      TList *contents  = new TList; // create output list
1792      contents->SetOwner();      contents->SetOwner();
1793            
# Line 932  TList*  PamLevel2::GetListOfLevel2Files( Line 1803  TList*  PamLevel2::GetListOfLevel2Files(
1803  //          return 0;  //          return 0;
1804  //      }        //      }      
1805  //      flisttxt = fullpath;  //      flisttxt = fullpath;
1806            if ( !flisttxt.EndsWith(".root") ){
1807    
1808          flisttxt = gSystem->ConcatFileName(gSystem->DirName(flisttxt),gSystem->BaseName(flisttxt));              flisttxt = gSystem->ConcatFileName(gSystem->DirName(flisttxt),gSystem->BaseName(flisttxt));
1809    
1810          if( !gSystem->ChangeDirectory(ddir) ){              if( !gSystem->ChangeDirectory(ddir) ){
1811              cout << "Cannot change directory : "<<ddir<<endl;                  cout << "Cannot change directory : "<<ddir<<endl;
1812              return 0;                  return 0;
         }  
           
         cout <<"Input file list : " << flisttxt <<endl;  
         ifstream in;  
         in.open(flisttxt, ios::in); //open input file list  
         if(!in.good()){  
             cout <<" ERROR opening the file "<<endl;  
             gSystem->ChangeDirectory(wdir); // back to the working directory  
             return 0;  
         }        
         int line=0;  
         while (1) {  
             TString file;  
             in >> file;  
             if (!in.good()) break;  
             line++;  
 //          cout <<"(1) " << file << endl;  
             if(file.IsNull()){  
                 cout << "-- list interrupted at line "<<line <<endl;  
                 break;  
1813              }              }
1814              if(file.Contains("#"))file = file(0,file.First("#"));          
1815                cout <<"Input file list : " << flisttxt <<endl;
1816                ifstream in;
1817                in.open(flisttxt, ios::in); //open input file list
1818                if(!in.good()){
1819                    cout <<" ERROR opening the file "<<endl;
1820                    gSystem->ChangeDirectory(wdir); // back to the working directory
1821                    return 0;
1822                }  
1823                int line=0;
1824                while (1) {
1825                    TString file;
1826                    in >> file;
1827                    if (!in.good()) break;
1828                    line++;
1829    //          cout <<"(1) " << file << endl;
1830                    if(file.IsNull()){
1831                        cout << "-- list interrupted at line "<<line <<endl;
1832                        break;
1833                    }
1834                    if(file.Contains("#"))file = file(0,file.First("#"));
1835  //          cout <<"(2) " << file << endl;  //          cout <<"(2) " << file << endl;
1836  //          if( gSystem->IsFileInIncludePath(file,&fullpath) ){  //          if( gSystem->IsFileInIncludePath(file,&fullpath) ){
1837  //          if( (fullpath = gSystem->FindFile(ddir,file)) ){  //          if( (fullpath = gSystem->FindFile(ddir,file)) ){
1838              char *fullpath = gSystem->ConcatFileName(gSystem->DirName(ddir),gSystem->BaseName(file));                  if( file.EndsWith(".root") ){
1839              contents->Add(new TSystemFile(fullpath,gSystem->DirName(fullpath)));// add file to the list                      TString filedir;
1840              delete fullpath;                      if (ddir != ""){
1841                            filedir = ddir; // take the input dir
1842                        } else {
1843                            gSystem->ChangeDirectory(wdir); // back to the working directory
1844                            filedir = gSystem->DirName(file); // this will take the path if exist in the list otherwise it will return automatically the working dir
1845                        };
1846                        char *fullpath = gSystem->ConcatFileName(gSystem->DirName(filedir),gSystem->BaseName(file));
1847                        contents->Add(new TSystemFile(fullpath,gSystem->DirName(fullpath)));// add file to the list
1848                        delete fullpath;
1849                    }
1850  //          }else{  //          }else{
1851  //              if(file.Data()!="")cout << "File: "<<file<<" ---> missing "<< endl;  //              if(file.Data()!="")cout << "File: "<<file<<" ---> missing "<< endl;
1852  //          };  //          };
1853          };              };
1854          in.close();              in.close();
1855                    } else {
1856                if(flisttxt.Contains("#"))flisttxt = flisttxt(0,flisttxt.First("#"));
1857                char *fullpath = gSystem->ConcatFileName(gSystem->DirName(flisttxt),gSystem->BaseName(flisttxt));
1858                contents->Add(new TSystemFile(fullpath,gSystem->DirName(fullpath)));// add file to the list
1859                delete fullpath;
1860            };      
1861      }else{      }else{
1862                    
1863          cout << "No input file list given."<<endl;          cout << "No input file list given."<<endl;
1864          cout << "Check for existing root files."<<endl;          cout << "Check for existing root files."<<endl;
1865  //              cout << "Warking directory: "<< gSystem->WorkingDirectory()<< endl;  //              cout << "Warking directory: "<< gSystem->WorkingDirectory()<< endl;
1866                    if ( ddir == "" ){
1867                ddir = wdir;
1868                cout << "Level2 data directory : "<<  ddir << endl;
1869            };
1870    
1871          TSystemDirectory *datadir = new TSystemDirectory(gSystem->BaseName(ddir),ddir);          TSystemDirectory *datadir = new TSystemDirectory(gSystem->BaseName(ddir),ddir);
1872          TList *temp = datadir->GetListOfFiles();          TList *temp = datadir->GetListOfFiles();
1873  //              temp->Print();  //              temp->Print();
# Line 1021  TList*  PamLevel2::GetListOfLevel2Files( Line 1911  TList*  PamLevel2::GetListOfLevel2Files(
1911   * @return Pointer to a TChain   * @return Pointer to a TChain
1912   */   */
1913  TChain *PamLevel2::GetPamTree(TList *fl, TString detlist ){  TChain *PamLevel2::GetPamTree(TList *fl, TString detlist ){
1914        //
1915        //
1916        //
1917        if ( pam_tree ){
1918            printf("WARNING: TChain *PamLevel2::GetPamTree(TList *fl, TString detlist) -- pam_tree already exists!\n ");
1919            return pam_tree;
1920        };
1921        //
1922            
1923      TChain *Trout =0;      TChain *Trout =0;
1924    
1925  //    if( !detlist.IsNull() )SetWhichTrees(detlist);      // -------------------------------------------
1926      SetWhichTrees(detlist);      // set flags to include/exclude trees/branches
1927            // -------------------------------------------
1928      cout<< "GetPamTree(TList*,TString): input detector list --> ";      if( detlist.Contains("+AUTO", TString::kIgnoreCase) ) {
1929      if(TRK1)cout<<"TRK1 ";          if( fl->GetEntries()>0 ){
1930      if(TRK2)cout<<"TRK2 ";              cout << "+AUTO"<<endl;
1931      if(TRKh)cout<<"TRKH ";              TFile *fprimo = new TFile( fl->At(0)->GetName() );
1932      if(CAL1)cout<<"CAL1 ";              GetWhichTrees(fprimo);
1933      if(CAL2)cout<<"CAL2 ";              fprimo->Close();// AAAAARGGGGGHHHHH!!!!!!! non commentare questa riga, altrimenti si incasina il TChain
1934      if(TOF)cout<<"TOF ";              fprimo->Delete();
1935      if(TRG)cout<<"TRG ";          }
1936      if(AC)cout<<"AC ";      };
1937      if(ND)cout<<"ND ";      SetWhichTrees(detlist);    
     if(S4)cout<<"S4 ";  
     if(ORB)cout<<"ORB ";  
     cout << endl;  
1938    
1939    
1940        // -------------------------------------------
1941        // build chains
1942        // -------------------------------------------
1943      TChain *T = 0;            TChain *T = 0;      
1944      TChain *C = 0;      TChain *C = 0;
1945      TChain *O = 0;      TChain *O = 0;
# Line 1049  TChain *PamLevel2::GetPamTree(TList *fl, Line 1948  TChain *PamLevel2::GetPamTree(TList *fl,
1948      TChain *N = 0;      TChain *N = 0;
1949      TChain *A = 0;      TChain *A = 0;
1950      TChain *B = 0;      TChain *B = 0;
1951        TChain *G = 0;
1952    
1953        TChain *L = 0;
1954            
1955      if(TRK2||TRK1||TRKh) T = new TChain("Tracker");          if(TRK2||TRK1||TRKh) T = new TChain("Tracker");    
1956      if(CAL2||CAL1)       C = new TChain("Calorimeter");      if(CAL2||CAL1)       C = new TChain("Calorimeter");
# Line 1058  TChain *PamLevel2::GetPamTree(TList *fl, Line 1960  TChain *PamLevel2::GetPamTree(TList *fl,
1960      if(ND)               N = new TChain("NeutronD");      if(ND)               N = new TChain("NeutronD");
1961      if(AC)               A = new TChain("Anticounter");      if(AC)               A = new TChain("Anticounter");
1962      if(ORB)              B = new TChain("OrbitalInfo");      if(ORB)              B = new TChain("OrbitalInfo");
1963        if(GP)               G = new TChain("h20");
1964        L = new TChain("SelectionList");
1965            
1966      // loop over files and create chains              // loop over files and create chains        
1967      TIter next(fl);      TIter next(fl);
# Line 1074  TChain *PamLevel2::GetPamTree(TList *fl, Line 1978  TChain *PamLevel2::GetPamTree(TList *fl,
1978              if(ND)               N->Add(name);              if(ND)               N->Add(name);
1979              if(AC)               A->Add(name);              if(AC)               A->Add(name);
1980              if(ORB)              B->Add(name);              if(ORB)              B->Add(name);
1981                if(GP)               G->Add(name);
1982                if(SELLI==1)         L->Add(name);
1983          };          };
1984      }      };
1985            
1986      cout << "done chain \n";      cout << "done chains\n";
1987        cout << "+--+--+--+--+--+--+--+--+--+--+--+--+--+--+--+--+--+" <<endl;
1988    
1989    
1990        // -------------------------------------------
1991        // make friends
1992        // -------------------------------------------
1993    
     UInt_t *found=0;  
1994  // Tracker  // Tracker
1995        cout << "Friends: "<<endl;
1996      if(T && (TRK2||TRK1||TRKh)) {      if(T && (TRK2||TRK1||TRKh)) {
         if(TRK2)T->SetBranchAddress("TrkLevel2", GetPointerTo("TrkLevel2"));  
         else    T->SetBranchStatus("TrkLevel2",0,found);  
         if(TRK2)cout << "Tracker      : set branch address TrkLevel2"<<endl;  
         if(TRK1)T->SetBranchAddress("TrkLevel1", GetPointerTo("TrkLevel1"));  
         else    T->SetBranchStatus("TrkLevel1",0,found);  
         if(TRK1)cout << "Tracker      : set branch address TrkLevel1"<<endl;  
         if(TRKh)T->SetBranchAddress("TrkHough", GetPointerTo("TrkHough"));  
         else    T->SetBranchStatus("TrkHough",0,found);  
         if(TRKh)cout << "Tracker      : set branch address TrkHough"<<endl;  
1997          if(!Trout)Trout=T;          if(!Trout)Trout=T;
1998          else Trout->AddFriend("Tracker");          else Trout->AddFriend("Tracker");
1999      }else{  //      cout << "+Tacker"<<endl;
         cout << "Tracker      : missing tree"<<endl;  
2000      };      };
2001      // Calorimeter      // Calorimeter
2002      if(C && (CAL2||CAL1)) {      if(C && (CAL2||CAL1)) {
         if(CAL2)C->SetBranchAddress("CaloLevel2", GetPointerTo("CaloLevel2"));  
         else    C->SetBranchStatus("CaloLevel2",0,found);  
         if(CAL2)cout << "Calorimeter  : set branch address CaloLevel2"<<endl;  
         if(CAL1)C->SetBranchAddress("CaloLevel1", GetPointerTo("CaloLevel1"));  
         else    C->SetBranchStatus("CaloLevel1",0,found);  
         if(CAL1)cout << "Calorimeter  : set branch address CaloLevel1"<<endl;  
2003          if(!Trout)Trout=C;          if(!Trout)Trout=C;
2004          else Trout->AddFriend("Calorimeter");          else Trout->AddFriend("Calorimeter");
2005      }else{  //      cout << "+Calorimeter"<<endl;
         cout << "Calorimeter  : missing tree"<<endl;  
2006      };      };
2007      // ToF          // ToF    
2008      if(O && TOF) {      if(O && TOF) {
         O->SetBranchAddress("ToFLevel2", GetPointerTo("ToFLevel2"));  
         cout << "ToF          : set branch address ToFLevel2"<<endl;  
2009          if(!Trout)Trout=O;          if(!Trout)Trout=O;
2010          else Trout->AddFriend("ToF");          else Trout->AddFriend("ToF");
2011      }else{  //      cout << "+ToF"<<endl;
         cout << "ToF         : missing tree"<<endl;  
2012      };      };
2013      // Trigger      // Trigger
2014      if(R && TRG) {      if(R && TRG) {
         R->SetBranchAddress("TrigLevel2", GetPointerTo("TrigLevel2"));  
         cout << "Trigger      : set branch address TrigLevel2"<<endl;  
2015          if(!Trout)Trout=O;          if(!Trout)Trout=O;
2016          else Trout->AddFriend("Trigger");          else Trout->AddFriend("Trigger");
2017      }else{  //      cout << "+Trigger"<<endl;
         cout << "Trigger      : missing tree"<<endl;  
2018      };      };
2019      // S4      // S4
2020      if(S && S4) {      if(S && S4) {
         S->SetBranchAddress("S4Level2", GetPointerTo("S4Level2"));  
         cout << "S4           : set branch address S4Level2"<<endl;  
2021          if(!Trout)Trout=O;          if(!Trout)Trout=O;
2022          else Trout->AddFriend("S4");          else Trout->AddFriend("S4");
2023      }else{  //      cout << "+S4"<<endl;
         cout << "S4           : missing tree"<<endl;  
2024      };      };
2025      // Neutron Detector      // Neutron Detector
2026      if(N && ND) {      if(N && ND) {
         N->SetBranchAddress("NDLevel2", GetPointerTo("NDLevel2"));  
         cout << "NeutronD     : set branch address NDLevel2"<<endl;  
2027          if(!Trout)Trout=O;          if(!Trout)Trout=O;
2028          else Trout->AddFriend("NeutronD");          else Trout->AddFriend("NeutronD");
2029      }else{  //      cout << "+NeutronD"<<endl;
         cout << "NeutronD     : missing tree"<<endl;  
2030      };      };
2031      // Anticounters      // Anticounters
2032      if(A && AC) {      if(A && AC) {
         A->SetBranchAddress("AcLevel2", GetPointerTo("AcLevel2"));  
         cout << "Anticounter  : set branch address AcLevel2"<<endl;  
2033          if(!Trout)Trout=O;          if(!Trout)Trout=O;
2034          else Trout->AddFriend("Anticounter");          else Trout->AddFriend("Anticounter");
2035      }else{  //      cout << "+Anticounter"<<endl;
         cout << "Anticounter  : missing tree"<<endl;  
2036      };      };
2037      // Orbital Info      // Orbital Info
2038      if(B && ORB) {      if(B && ORB) {
         B->SetBranchAddress("OrbitalInfo", GetPointerTo("OrbitalInfo"));  
         cout << "OrbitalInfo  : set branch address OrbitalInfo"<<endl;  
2039          if(!Trout)Trout=O;          if(!Trout)Trout=O;
2040          else Trout->AddFriend("OrbitalInfo");          else Trout->AddFriend("OrbitalInfo");
2041      }else{  //      cout << "+OrbitalInfo"<<endl;
2042          cout << "OrbitalInfo  : missing tree"<<endl;      };
2043        // GPamela
2044        if(G && GP) {
2045            if(!Trout)Trout=G;
2046            else Trout->AddFriend("h20");
2047    //      cout << "+h20"<<endl;
2048      };      };
       
 //    cout<<endl<<" Number of entries: "<<Trout->GetEntries()<<endl<<endl;  
2049    
2050        //  =====================================
2051  //     // Tracker  //  SET BRANCH-ADDRESS AFTER CHAIN+FRIEND
2052  //     if(TRK2||TRK1||TRKh){  //  =====================================
2053  //      if(!Tout)Tout=T;      SetBranchAddress(Trout);
2054  //      else Tout->AddFriend("Tracker");  
2055  //     }  
2056  //     // Calorimeter  //  ------------------------------------
2057  //     if(CAL2||CAL1) {          //  finally handle selection trees...
2058  //      if(!Tout)Tout=C;  //  (it is not friend of pamela tree)
2059  //      else Tout->AddFriend("Calorimeter");  //  ------------------------------------
2060  //     };  
2061  //     // ToF          cout << "+--+--+--+--+--+--+--+--+--+--+--+--+--+--+--+--+--+" <<endl;
2062  //     if(TOF) {  
2063  //      if(!Tout)Tout=O;      // Selection List
2064  //      else Tout->AddFriend("ToF");      if(L && SELLI==1) {
2065  //     };          cout<<">>> Found selection-list <<<"<<endl;
2066  //     // Trigger  //      L->SetBranchAddress("RunEntry",&irun);
2067  //     if(TRG) {          L->SetBranchAddress("RunEntry",&irunt);//NEWNEW
2068  //      if(!Tout)Tout=R;          cout << "SelectionList: set branch address RunEntry"<<endl;
2069  //      else Tout->AddFriend("Trigger");          L->SetBranchAddress("EventEntry",&irunentry);
2070  //     };          cout << "SelectionList: set branch address EventEntry"<<endl;
2071  //     // S4          sel_tree = L;
2072  //     if(S4) {  //      if(!Trout)Trout=O;
2073  //      if(!Tout)Tout=S;  //      else Trout->AddFriend("SelectionList");
2074  //      else Tout->AddFriend("S4");          cout << "+SelectionList"<<endl;
2075  //     };          cout << "+--+--+--+--+--+--+--+--+--+--+--+--+--+--+--+--+--+" <<endl;
2076  //     // Neutron Detector      }else{
2077  //     if(ND) {  //      cout << "SelectionList  : missing tree"<<endl;
2078  //      if(!Tout)Tout=N;          if(L)L->Delete();
2079  //      else Tout->AddFriend("NeutronD");      };
2080  //     };  
2081  //     // Anticounters  //  --------------------------------------------
2082  //     if(AC) {  //  return the pamela chain with all the friends
2083  //      if(!Tout)Tout=A;  //  --------------------------------------------
2084  //      else Tout->AddFriend("Anticounter");  
2085  //     };      pam_tree = Trout;
 //     // OrbitalInfo  
 //     if(ORB) {  
 //      if(!Tout)Tout=B;  
 //      else Tout->AddFriend("OrbitalInfo");  
 //     };  
       
 //    cout<<endl<<" Number of entries: "<<Tout->GetEntries()<<endl<<endl;  
       
 //    if( Tout->GetEntries() )PamLevel2::SetBranchAddress( Tout );  
2086            
2087      return Trout;      return Trout;
2088  }  }
# Line 1237  void PamLevel2::SetBranchAddress(TTree * Line 2109  void PamLevel2::SetBranchAddress(TTree *
2109      ND     = ND  & t->GetBranchStatus("NDLevel2");      ND     = ND  & t->GetBranchStatus("NDLevel2");
2110      AC     = AC  & t->GetBranchStatus("AcLevel2");      AC     = AC  & t->GetBranchStatus("AcLevel2");
2111      ORB    = ORB & t->GetBranchStatus("OrbitalInfo");      ORB    = ORB & t->GetBranchStatus("OrbitalInfo");
2112        GP     = GP  & t->GetBranchStatus("h20");
2113    
2114    
2115      // Tracker      // Tracker
# Line 1293  void PamLevel2::SetBranchAddress(TTree * Line 2166  void PamLevel2::SetBranchAddress(TTree *
2166          t->SetBranchAddress("OrbitalInfo", GetPointerTo("OrbitalInfo"));          t->SetBranchAddress("OrbitalInfo", GetPointerTo("OrbitalInfo"));
2167          cout << "OrbitalInfo  : set branch address OrbitalInfo"<<endl;          cout << "OrbitalInfo  : set branch address OrbitalInfo"<<endl;
2168      };      };
2169        // GPamela
2170        if(GP) {
2171    //      GetPointerTo("GPamela");
2172            if(!gp_obj)gp_obj = new GPamela();
2173            gp_obj->SetBranchAddress(t); //ho dovuto fare in maniera diversa dagli altri
2174    //      t->SetBranchAddress("GPamela", GetPointerTo("GPamela"));
2175            cout << "h20          : set branch address GPamela "<<endl;
2176        };
2177            
2178  }  }
2179  /**  /**
# Line 1300  void PamLevel2::SetBranchAddress(TTree * Line 2181  void PamLevel2::SetBranchAddress(TTree *
2181   */   */
2182  void PamLevel2::SetBranchAddress(TChain *t){  void PamLevel2::SetBranchAddress(TChain *t){
2183    
2184      TRK2    = TRK2 & t->GetBranchStatus("TrkLevel2");  //     TRK2    = TRK2 & t->GetBranchStatus("TrkLevel2");
2185      TRK1    = TRK1 & t->GetBranchStatus("TrkLevel1");  //     TRK1    = TRK1 & t->GetBranchStatus("TrkLevel1");
2186      TRKh    = TRKh & t->GetBranchStatus("TrkHough");  //     TRKh    = TRKh & t->GetBranchStatus("TrkHough");
2187      CAL1    = CAL1 & t->GetBranchStatus("CaloLevel1");  //     CAL1    = CAL1 & t->GetBranchStatus("CaloLevel1");
2188      CAL2    = CAL2 & t->GetBranchStatus("CaloLevel2");  //     CAL2    = CAL2 & t->GetBranchStatus("CaloLevel2");
2189      TOF    = TOF & t->GetBranchStatus("ToFLevel2");  //     TOF    = TOF & t->GetBranchStatus("ToFLevel2");
2190      TRG    = TRG & t->GetBranchStatus("TrigLevel2");  //     TRG    = TRG & t->GetBranchStatus("TrigLevel2");
2191      S4     = S4  & t->GetBranchStatus("S4Level2");  //     S4     = S4  & t->GetBranchStatus("S4Level2");
2192      ND     = ND  & t->GetBranchStatus("NDLevel2");  //     ND     = ND  & t->GetBranchStatus("NDLevel2");
2193      AC     = AC  & t->GetBranchStatus("AcLevel2");  //     AC     = AC  & t->GetBranchStatus("AcLevel2");
2194      ORB    = ORB & t->GetBranchStatus("OrbitalInfo");  //     ORB    = ORB & t->GetBranchStatus("OrbitalInfo");
2195    //    GP     = GP & t->GetBranchStatus("h20");
2196    
2197      // Tracker      // Tracker
2198       if(TRK2) {      if(TRK2) {
2199          t->SetBranchAddress("TrkLevel2", GetPointerTo("TrkLevel2"));          t->SetBranchAddress("TrkLevel2", GetPointerTo("TrkLevel2"));
2200          cout << "Tracker      : set branch address TrkLevel2"<<endl;          cout << "Tracker      : set branch address TrkLevel2"<<endl;
2201      };      };
# Line 1321  void PamLevel2::SetBranchAddress(TChain Line 2203  void PamLevel2::SetBranchAddress(TChain
2203          t->SetBranchAddress("TrkLevel1", GetPointerTo("TrkLevel1"));          t->SetBranchAddress("TrkLevel1", GetPointerTo("TrkLevel1"));
2204          cout << "Tracker      : set branch address TrkLevel1"<<endl;          cout << "Tracker      : set branch address TrkLevel1"<<endl;
2205      };      };
2206       if(TRKh) {      if(TRKh) {
2207          t->SetBranchAddress("TrkHough", GetPointerTo("TrkHough"));          t->SetBranchAddress("TrkHough", GetPointerTo("TrkHough"));
2208          cout << "Tracker      : set branch address TrkHough"<<endl;          cout << "Tracker      : set branch address TrkHough"<<endl;
2209       };      };
2210            
2211      // Calorimeter      // Calorimeter
2212      if(CAL2) {      if(CAL2) {
# Line 1366  void PamLevel2::SetBranchAddress(TChain Line 2248  void PamLevel2::SetBranchAddress(TChain
2248          t->SetBranchAddress("OrbitalInfo", GetPointerTo("OrbitalInfo"));          t->SetBranchAddress("OrbitalInfo", GetPointerTo("OrbitalInfo"));
2249          cout << "OrbitalInfo  : set branch address OrbitalInfo"<<endl;          cout << "OrbitalInfo  : set branch address OrbitalInfo"<<endl;
2250      };      };
2251            // GPamela
2252    //    cout <<"GP "<<GP<<endl;
2253        if(GP) {
2254    //      GetPointerTo("GPamela");
2255            if(!gp_obj)gp_obj = new GPamela();
2256            gp_obj->SetBranchAddress(t); //ho dovuto fare in maniera diversa dagli altri
2257            cout << "h20          : set branch address GPamela "<<endl;
2258        };
2259        // SelectionList
2260    //     if(SELLI==1){
2261    //      t->SetBranchAddress("RunEntry",&irunt);//NEWNEW
2262    //      cout << "SelectionList: set branch address RunEntry"<<endl;
2263    //      t->SetBranchAddress("EventEntry",&irunentry);
2264    //      cout << "SelectionList: set branch address EventEntry"<<endl;
2265            
2266    //     }
2267    
2268  }  }
2269    
2270    
# Line 1380  void PamLevel2::SetBranchAddress(TChain Line 2278  void PamLevel2::SetBranchAddress(TChain
2278   * @return Pointer to a TChain   * @return Pointer to a TChain
2279   */   */
2280  TChain *PamLevel2::GetRunTree(TList *fl){  TChain *PamLevel2::GetRunTree(TList *fl){
2281                //
2282        //
2283        //
2284        if ( run_tree ){
2285            printf("WARNING: TChain *PamLevel2::GetRunTree(TList *fl) -- run_tree already exists!\n ");
2286            return run_tree;
2287        };  
2288        //
2289    
2290    
2291      TChain *R = new TChain("Run");      TChain *R = new TChain("Run");
2292            
2293      // loop over files and create chains              // loop over files and create chains        
# Line 1394  TChain *PamLevel2::GetRunTree(TList *fl) Line 2301  TChain *PamLevel2::GetRunTree(TList *fl)
2301          };          };
2302      }      }
2303            
2304      R->SetBranchAddress("RunInfo", GetPointerTo("RunInfo"));  
2305      cout << "Run         : set branch address RunInfo"<<endl;      if(RUN && R->GetNtrees()){
     R->SetBranchAddress("SoftInfo", GetPointerTo("SoftInfo")); // Emiliano  
     cout << "Software    : set branch address SoftInfo"<<endl; // Emiliano  
2306            
2307            R->SetBranchAddress("RunInfo", GetPointerTo("RunInfo"));
2308            cout << "Run         : set branch address RunInfo"<<endl;
2309            R->SetBranchAddress("SoftInfo", GetPointerTo("SoftInfo")); // Emiliano
2310            cout << "Software    : set branch address SoftInfo"<<endl; // Emiliano
2311    
2312            irunoffset = new int[R->GetNtrees()];
2313            if(DBG){
2314                cout << "----------------------------------------------------"<<endl;
2315                cout << "irun\t | ";
2316                cout << "tree\t |";
2317    //      cout << "offset\t |";
2318                cout << "RUN\t";
2319                cout << "FRAG\t";
2320                cout << "NEVENTS\t";
2321                cout << "absolute time\t\t\t";
2322                cout << "on-board time";
2323                cout<<endl;
2324            }
2325            for (Int_t ii=0; ii<R->GetEntries(); ii++){
2326                R->GetEntry(ii);
2327                if(DBG){
2328                    cout << ii<< "\t | ";
2329                    cout << R->GetTreeNumber()<< "\t |";
2330    //          cout << R->GetChainOffset()<< "\t |";
2331                    cout <<GetRunInfo()->ID<<"\t";
2332                    cout <<GetRunInfo()->ID_RUN_FRAG<<"\t";
2333                    cout <<GetRunInfo()->NEVENTS<< "\t";
2334                    cout <<GetRunInfo()->RUNHEADER_TIME<<" <---> "<<GetRunInfo()->RUNTRAILER_TIME <<"\t";
2335                    cout <<GetRunInfo()->RUNHEADER_OBT<<" <---> "<<GetRunInfo()->RUNTRAILER_OBT<<"\t";
2336                    cout <<endl;
2337                }
2338                irunoffset[R->GetTreeNumber()]=R->GetChainOffset();
2339            }
2340            cout << "N.run = "<<R->GetEntries()<<endl;
2341            cout << "----------------------------------------------------"<<endl;
2342    
2343    
2344        }else{
2345            delete R;
2346            R=0;
2347        }
2348        
2349    
2350        run_tree = R;
2351    
2352      return R;      return R;
2353            
2354  }  }
# Line 1412  TChain *PamLevel2::GetRunTree(TList *fl) Line 2362  TChain *PamLevel2::GetRunTree(TList *fl)
2362   * @return Pointer to a TTree   * @return Pointer to a TTree
2363   */   */
2364  TTree *PamLevel2::GetRunTree(TFile *f){  TTree *PamLevel2::GetRunTree(TFile *f){
2365        if ( run_tree ){
2366            printf("WARNING: TTree *PamLevel2::GetRunTree(TFile *f) -- run_tree already exists!\n ");
2367            return run_tree;
2368        };
2369            
2370    
2371        cout << "TTree *PamLevel2::GetRunTree(TFile *f) -- obsolte "<<endl;
2372    
2373      TTree *R = (TTree*)f->Get("Run");      TTree *T = (TTree*)f->Get("Run");
       
     R->SetBranchAddress("RunInfo", GetPointerTo("RunInfo"));  
     cout << "Run         : set branch address RunInfo"<<endl;  
     R->SetBranchAddress("SoftInfo", GetPointerTo("SoftInfo")); // Emiliano  
     cout << "Software    : set branch address SoftInfo"<<endl; // Emiliano  
2374            
2375      return R;      if(T){
2376            T->SetBranchAddress("RunInfo", GetPointerTo("RunInfo"));
2377            cout << "Run         : set branch address RunInfo"<<endl;
2378            T->SetBranchAddress("SoftInfo", GetPointerTo("SoftInfo")); // Emiliano
2379            cout << "Software    : set branch address SoftInfo"<<endl; // Emiliano
2380    
2381        }
2382    
2383        run_tree = (TChain*)T;
2384    
2385        return T;
2386            
2387  }  }
2388  /**  /**
# Line 1429  TTree *PamLevel2::GetRunTree(TFile *f){ Line 2390  TTree *PamLevel2::GetRunTree(TFile *f){
2390   * @param run Pointer to the chain/tree which contains run infos   * @param run Pointer to the chain/tree which contains run infos
2391   * @return true if a new run has been read, false if it is still the same run   * @return true if a new run has been read, false if it is still the same run
2392   */   */
2393  Bool_t PamLevel2::UpdateRunInfo(TChain *run, ULong64_t iev){  Bool_t PamLevel2::UpdateRunInfo(TChain *run, Long64_t iev){
2394    //      //
2395    // check if we have already called once GetEntry, if not call it      // check if we have already called once GetEntry, if not call it
2396    //      //
2397    if ( run->GetEntries() <= 0 ) return(false);      cout << "Bool_t PamLevel2::UpdateRunInfo(TChain *run, Long64_t iev) --- ATTENZIONE --- NON E` MANTENUTA!!!!!!!.... "<<endl;
2398    //      if(!run){
2399    Int_t oldrun = irun;          cout << "Bool_t PamLevel2::UpdateRunInfo(TChain *run, ULong64_t iev) -- ERROR -- missing RunInfo tree "<<endl;
2400    if ( irun < 0 ){          return(false);  
2401      irun = 0;      }
2402      run->GetEntry(0);      if ( run->GetEntries() <= 0 ) return(false);
2403      runfirstentry = 0ULL;      //
2404      runlastentry += (ULong64_t)(this->GetRunInfo()->NEVENTS) - 1ULL;    
2405    };      //  Int_t oldrun = irun;
2406    while ( iev > (runfirstentry+(ULong64_t)(this->GetRunInfo()->NEVENTS-1)) && irun < run->GetEntries() ){      Long64_t oldrun = irun;
2407      //    printf(" iev %llu %u %llu \n",iev,this->GetRunInfo()->NEVENTS,(ULong64_t)(runfirstentry+(ULong64_t)(this->GetRunInfo()->NEVENTS)));  
2408      irun++;      // --------------------------------------
2409      run->GetEntry(irun);      // if it is a full file (not preselected)
2410      runfirstentry = runlastentry+1ULL;      // --------------------------------------
2411      runlastentry += (ULong64_t)(this->GetRunInfo()->NEVENTS);      if(SELLI==0){
2412    };  
2413    //          //
2414    if ( irun == oldrun || irun >= run->GetEntries() ) return(false);          // the absolute time is necessary to relate the event with the run
2415    //          //
2416    //  printf(" iev %llu irun %i nevents %u 1st %llu last %llu \n",iev,irun,this->GetRunInfo()->NEVENTS,(ULong64_t)runfirstentry,(ULong64_t)runlastentry);          if( !GetOrbitalInfo() && !ISGP){
2417    //              cout << "Bool_t PamLevel2::UpdateRunInfo(TChain *run, ULong64_t iev) -- ERROR -- missing OrbitalInfo "<<endl;
2418    return(true);                  return(false);
2419    //          }
2420    
2421            ULong64_t abstime = 0;
2422            if( GetOrbitalInfo() )abstime=GetOrbitalInfo()->absTime;
2423    
2424    
2425            //
2426            // the first time the routine is called, set run search from the beginning
2427            //
2428            if ( irun < 0LL ){
2429                irun = 0LL;
2430                run->GetEntry(irun);
2431                runfirstentry = 0LL;
2432                runlastentry += (Long64_t)(this->GetRunInfo()->NEVENTS);
2433                if ( (Long64_t)(this->GetRunInfo()->NEVENTS) > 0LL ) runlastentry -= 1LL;
2434              
2435                if( ISGP && run->GetEntries()!=1 ){
2436                    cout << "** WARNING ** simulated files are assumed to have 1 single run, not "<< run->GetEntries() << endl;
2437                    cout << "** WARNING ** run will not be updated"<<endl;
2438                }
2439    
2440            };      
2441            //
2442            if(ISGP)abstime = GetRunInfo()->RUNHEADER_TIME; // BARBATRUCCO
2443            //
2444            if ( irun == run->GetEntries()-1LL &&
2445                 !(abstime >= GetRunInfo()->RUNHEADER_TIME &&
2446                   abstime <= GetRunInfo()->RUNTRAILER_TIME)
2447                ){
2448                irun = -1LL;
2449                irunt = -1LL;
2450                runfirstentry = 0LL;
2451                runlastentry = -1LL;
2452            };
2453            // modificato il controllo sull'aggiornamento del run, per evitare problemi
2454            // dovuti agli eventi annidati (NB! NEVENTS conta anche questi!!)
2455            //
2456            bool fromfirst = true;
2457            //
2458            while ( !(abstime >= GetRunInfo()->RUNHEADER_TIME && abstime <= GetRunInfo()->RUNTRAILER_TIME) && irun < run->GetEntries()-1LL ){
2459    //      while ( iev > (runfirstentry+(ULong64_t)(this->GetRunInfo()->NEVENTS-1)) && irun < run->GetEntries() ){
2460                irun++;
2461                run->GetEntry(irun);
2462                runfirstentry = runlastentry;
2463                if ( (Long64_t)(this->GetRunInfo()->NEVENTS) > 0LL ) runfirstentry += 1LL;
2464                runlastentry += (Long64_t)(this->GetRunInfo()->NEVENTS);
2465    //        cout << " ))))) UPDATE RUN INFO (((((  @iev "<<iev<<" run "<<GetRunInfo()->ID<<" irun "<<irun<<endl;
2466    //        cout << "runfirstentry "<<runfirstentry<<endl;
2467                //    printf(" iev %llu %u %llu \n",iev,this->GetRunInfo()->NEVENTS,(ULong64_t)(runfirstentry+(ULong64_t)(this->GetRunInfo()->NEVENTS)));
2468                //    printf(" abstime %u trailertime %u \n",abstime,GetRunInfo()->RUNTRAILER_TIME);
2469                //    printf(" IDRUN %u \n",GetRunInfo()->ID);
2470                //
2471    //        prevshift = 0;
2472                //
2473                if ( irun == (Long64_t)(run->GetEntries()-1LL) && fromfirst && !(abstime >= GetRunInfo()->RUNHEADER_TIME && abstime <= GetRunInfo()->RUNTRAILER_TIME)){
2474                    printf(" resetting irun  (it should NOT happen!!!)\n");
2475                    fromfirst = false;
2476                    irun = 0;
2477                    run->GetEntry(irun);
2478                    runfirstentry = 0ULL;
2479                    runlastentry += (Long64_t)(this->GetRunInfo()->NEVENTS);
2480                    if ( (Long64_t)(this->GetRunInfo()->NEVENTS) > 0LL ) runlastentry -= 1LL;
2481                };
2482                //
2483            };
2484            //
2485            if (
2486                !(abstime >= GetRunInfo()->RUNHEADER_TIME &&
2487                  abstime <= GetRunInfo()->RUNTRAILER_TIME)
2488                ) {
2489                printf(" Something very wrong here: cannot find RUN containing absolute time %llu \n",abstime);
2490                return false;
2491            }
2492            //
2493            if ( irun == oldrun || irun >= run->GetEntries() ) return(false);
2494            //
2495            //  printf(" iev %llu irun %i nevents %u 1st %llu last %llu \n",iev,irun,this->GetRunInfo()->NEVENTS,(ULong64_t)runfirstentry,(ULong64_t)runlastentry);
2496            //
2497            prevshift = 0;
2498            cout << " ))))) UPDATE RUN INFO (((((  @iev "<<iev<<" run "<<GetRunInfo()->ID<<" irun "<<irun<<endl;
2499    //      cout << "runfirstentry "<<runfirstentry<<endl;
2500            return(true);    
2501        };
2502        // ----------------------------------------------------
2503        // if it is a preselected file (there is SelectionList)
2504        // NBNB - the event tree MUST be read first
2505        // ----------------------------------------------------
2506        if(SELLI==1){      
2507            sel_tree->GetEntry(iev);
2508    //      cout << irun << " "<< irunentry << endl;
2509            if(irun != oldrun){
2510                run->GetEntry(irun);
2511                cout << " ))))) UPDATE RUN INFO (((((  @iev "<<iev<<" run "<<GetRunInfo()->ID<<" irun "<<irun<<endl;
2512                prevshift = 0;
2513                return true;
2514            }
2515            return false;
2516        }
2517    
2518        return false;
2519        //
2520    };
2521    
2522    Bool_t PamLevel2::UpdateRunInfo(Long64_t iev){
2523    
2524        if(!run_tree){
2525            cout << " Bool_t PamLevel2::UpdateRunInfo(ULong64_t iev) -- ERROR -- run tree not loaded"<<endl;
2526            return false;
2527        }
2528        if ( run_tree->GetEntries() <= 0 ) {
2529            cout << " Bool_t PamLevel2::UpdateRunInfo(ULong64_t iev) -- ERROR -- run tree is empty"<<endl;
2530            return(false);
2531        }
2532      
2533        Int_t oldrun = irun; // store current run index
2534    
2535        // -----------------------------------------------------------------------
2536        // the first time the routine is called, set run search from the beginning
2537        // -----------------------------------------------------------------------
2538    
2539        if ( irun < 0 ){
2540            irun = 0LL;
2541            irunt = 0LL;
2542            irunentry = 0;
2543            prevshift = 0;
2544            run_tree->GetEntry(irun);
2545            if( !GetOrbitalInfo() )cout << "** WARNING ** missing OrbitalInfo ---> run info might be not correctly updated "<<endl;
2546        };      
2547        // ---------------------------------------------------------------
2548        // retrieve OBT and absolute time of the event
2549        // ---------------------------------------------------------------
2550        ULong64_t abstime = 0LL;
2551        ULong64_t obt     = 0LL;
2552        if( GetOrbitalInfo() ){
2553            abstime = GetOrbitalInfo()->absTime;
2554            obt     = GetOrbitalInfo()->OBT;
2555    //      cout << " ABS >>> "<<abstime<<" OBT >>> "<<obt<<" "<<endl;
2556        }else{
2557            abstime = GetRunInfo()->RUNHEADER_TIME;
2558            obt     = GetRunInfo()->RUNHEADER_OBT;
2559        }
2560    //    cout << ISGP << " "<<abstime<<endl;
2561        // ---------------------------------------------------------------
2562        // the absolute time is necessary to relate the event with the run
2563        // ---------------------------------------------------------------
2564    //     if( !GetOrbitalInfo() && !ISGP ){
2565    //      cout << "Bool_t PamLevel2::UpdateRunInfo(Long64_t iev) -- ERROR -- missing OrbitalInfo "<<endl;
2566    //      return(false);
2567    //     }
2568        // -----------------------------------------------------------------------
2569        // if it is simulation, assign abstime by hand (temporaneo!!!)
2570        // -----------------------------------------------------------------------
2571    //     if(ISGP){
2572    //      abstime = GetRunInfo()->RUNHEADER_TIME; // BARBATRUCCO
2573    //      obt     = GetRunInfo()->RUNHEADER_OBT; // BARBATRUCCO
2574    //     }
2575        
2576    
2577        // +-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-
2578        // if it is a full file (not preselected)
2579        // +-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-
2580        if(SELLI==0){
2581    
2582            // ---------------------------------------------------------------
2583            // increment dead and live-time counters
2584            // (only when reading a file not preselected)
2585            // ---------------------------------------------------------------
2586            if(SELLI==0){
2587                if( GetTrigLevel2() ){
2588                    totdltime[0]+=GetTrigLevel2()->dltime[0];
2589                    totdltime[1]+=GetTrigLevel2()->dltime[1];
2590                }
2591                totdltime[2]++;
2592            }
2593    //      cout << setw(10)<<totdltime[0]<<setw(10)<<totdltime[1]<<setw(10)<<totdltime[2]<<endl;
2594    
2595    //      // ---------------------------------------------------------------
2596    //      // retrieve OBT and absolute time of the event
2597    //      // ---------------------------------------------------------------
2598    //      ULong64_t abstime = 0;
2599    //      ULong64_t obt     = 0;
2600    //      if( GetOrbitalInfo() ){
2601    //          abstime = GetOrbitalInfo()->absTime;
2602    //          obt     = GetOrbitalInfo()->OBT;
2603    //      }
2604    //      // ---------------------------------------------------------------
2605    //      // the absolute time is necessary to relate the event with the run
2606    //      // ---------------------------------------------------------------
2607    //      if( !GetOrbitalInfo() && !ISGP ){
2608    //          cout << "Bool_t PamLevel2::UpdateRunInfo(Long64_t iev) -- ERROR -- missing OrbitalInfo "<<endl;
2609    //          return(false);
2610    //      }
2611          
2612    //      // -----------------------------------------------------------------------
2613    //      // the first time the routine is called, set run search from the beginning
2614    //      // -----------------------------------------------------------------------
2615    //      if ( irun < 0 ){
2616    //          irun = 0LL;
2617    //          irunt = 0LL;
2618    //          irunentry = 0;
2619    //          prevshift = 0;
2620    //          run_tree->GetEntry(irun);
2621    
2622    //          if( ISGP && run_tree->GetEntries()!=1 ){
2623    //              cout << "** WARNING ** simulated files are assumed to have 1 single run, not "<< run_tree->GetEntries() << endl;
2624    //              cout << "** WARNING ** run will not be updated"<<endl;
2625    //          }
2626    //      };      
2627    
2628    //      // -----------------------------------------------------------------------
2629    //      // if it is simulation, assign abstime by hand (temporaneo!!!)
2630    //      // -----------------------------------------------------------------------
2631    //      if(ISGP){
2632    //          abstime = GetRunInfo()->RUNHEADER_TIME; // BARBATRUCCO
2633    //          obt     = GetRunInfo()->RUNHEADER_OBT; // BARBATRUCCO
2634    //      }
2635            //
2636            bool fromfirst = true; // first loop over runs
2637    
2638    //      Bool_t hasfrag = false;
2639    //      if( GetRunInfo()->ID_RUN_FRAG!=0 && GetRunInfo()->ID_RUN_FRAG != GetRunInfo()->ID)hasfrag=true;
2640    //      ULong64_t fragid = GetRunInfo()->ID_RUN_FRAG;
2641    
2642            // ------------------------------------------------------
2643            // loop over runs to find the one that contains the event
2644            // ------------------------------------------------------
2645            while (
2646                (
2647                    (
2648                        !(abstime >= GetRunInfo()->RUNHEADER_TIME &&    // check on absolute time (s)
2649                          abstime <= GetRunInfo()->RUNTRAILER_TIME) &&
2650                        !(obt >= GetRunInfo()->RUNHEADER_OBT &&         // additional check on OBT (ms)
2651                          obt <= GetRunInfo()->RUNTRAILER_OBT)
2652                        )
2653                    || GetRunInfo()->NEVENTS==0
2654    //              || !(irunentry < GetRunInfo()->NEVENTS-1-prevshift) // ERRORE!!! fa saltare i run con 1 evento
2655                    || !(irunentry <= GetRunInfo()->NEVENTS-1-prevshift)
2656                    )
2657                && irun < run_tree->GetEntries() ){
2658    
2659                // - - - - - - - - - - - - -
2660                // irunentry = position of current entry, relative to the run
2661                // prevshift = shift needed to synchronize l0 and l2 data (nested events)
2662                // - - - - - - - - - - - - -
2663    
2664                // -----------------------------------------
2665                // store dead and live-time of previous run
2666                // -----------------------------------------
2667    //          if(SELLI==0){
2668                    if(fromfirst){
2669                        if(oldrun==irun){
2670                            /// decrement counters
2671                            if( GetTrigLevel2()){
2672                                totdltime[0]-=GetTrigLevel2()->dltime[0];//live-time
2673                                totdltime[1]-=GetTrigLevel2()->dltime[1];//dead-time
2674                            }
2675                            totdltime[2]--;                              //event counter
2676                            cout << endl;
2677                            cout << "n.events     : "<<totdltime[2]<<endl;
2678                            cout << "RUN LIVE-TIME: "<<totdltime[0]*0.16<<" ms"<<endl;
2679                            cout << "RUN DEAD-TIME: "<<totdltime[1]*0.01<<" ms"<<endl;          
2680                        }else{
2681                            totdltime[0]=0;//live-time
2682                            totdltime[1]=0;//dead-time
2683                            totdltime[2]=0;                             //event counter
2684                            cout << " *** JUMP RUN *** irun "<<irun<<endl;
2685                        }
2686                        /// add an entry
2687                        if(run_tree_clone)
2688                            if(run_tree_clone->GetBranch("DeadLiveTime")->GetEntries() < run_tree->GetEntries())
2689                                run_tree_clone->GetBranch("DeadLiveTime")->Fill();
2690                        /// reset counters
2691                        if( GetTrigLevel2() ){
2692                            totdltime[0]=GetTrigLevel2()->dltime[0];//live-time
2693                            totdltime[1]=0;                         //dead-time
2694                        }
2695                        totdltime[2]=1;                             //event counter
2696                    }
2697    //          }
2698    
2699                irun++;        
2700                // ------------------------------------
2701                // if the end of run tree is reached...
2702                // ------------------------------------
2703                if( irun == run_tree->GetEntries() ){
2704                    if(!fromfirst){
2705                        // -----------------------------------------------------
2706                        // if it happened already once and the run was not found
2707                        // ---> exit with error
2708                        // -----------------------------------------------------
2709                        cout << "Bool_t PamLevel2::UpdateRunInfo(Long64_t iev) -- ERROR -- event entry #"<<iev<<" does not belong to any run (should not happen)" <<endl;
2710                        return false;
2711                    }
2712                    // -----------------------------------------
2713                    // ...otherwise repeat search from beginning
2714                    // -----------------------------------------
2715                    cout << "Bool_t PamLevel2::UpdateRunInfo(Long64_t iev) -- WARNING -- reached end of run tree. searchin again from beginning " <<endl;
2716                    fromfirst = false;
2717                    irun = 0LL;
2718                    runfirstentry = 0LL;
2719                }
2720                // -------------------------------------------------------------------
2721                // save the index of the first entry of the run, relative to pam_tree,
2722                // and read a new run
2723                // -------------------------------------------------------------------
2724                if(irun>0)runfirstentry += (GetRunInfo()->NEVENTS)-prevshift;
2725                irunentry = 0;
2726                prevshift = 0;          
2727                run_tree->GetEntry(irun);
2728                irunt = irun - irunoffset[run_tree->GetTreeNumber()];
2729                if(GetRunInfo()->RUNHEADER_OBT>GetRunInfo()->RUNTRAILER_OBT ){
2730                    cout << "Bool_t PamLevel2::UpdateRunInfo(Long64_t iev) -- WARNING -- irun "<<irun<<"  has RUNHEADER_OBT>=RUNTRAILER_OBT " <<endl;
2731                    cout << "                                                            (NB!! in this case some events are assigned to a wrong run)"<<endl;
2732                }
2733    //          if(hasfrag &&  fragid != GetRunInfo()->ID){
2734    //              cout << "... where is the next fragment ??"<<endl;
2735    //          }
2736            };
2737    
2738    
2739            // --------------------------------------
2740            // if there was no need to update the run
2741            // ---> exit with FALSE
2742            // --------------------------------------
2743            if ( irun == oldrun ) return(false);
2744    
2745            // --------------------------------------
2746            // ... otherwise
2747            // --------------------------------------
2748    
2749    
2750    
2751    
2752            // --------------------------------------
2753            // ---> exit with TRUE
2754            // --------------------------------------
2755            cout << endl << " ))))) UPDATE RUN INFO (((((  @iev "<<iev<<" run "<<GetRunInfo()->ID<<" irun "<<irun<<endl;
2756            // ----------------------------------------------------
2757            // then check if the run has a fragment
2758            // in this case we have to switch to the next fragment
2759            // when the end of the first fragment is reached
2760            // ----------------------------------------------------
2761            if(
2762                GetRunInfo()->ID_RUN_FRAG != 0 &&
2763    //          GetRunInfo()->ID_RUN_FRAG != GetRunInfo()->ID &&
2764                true ){
2765                cout << "* fragment *"<<endl;              
2766            }
2767    
2768            return(true);    
2769        };
2770        // +-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-
2771        // if it is a preselected file (there is SelectionList)
2772        // +-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-
2773        // irun  = run entry relative to the chain
2774        // irunt = run entry relative to the tree
2775        if(SELLI==1){      
2776            sel_tree->GetEntry(iev);// read irunt from SelectionList
2777            irun = irunt + irunoffset[sel_tree->GetTreeNumber()];//NEWNEW
2778            if(irun != oldrun ){
2779                if( irun < run_tree->GetEntries() )run_tree->GetEntry(irun);
2780                // check if the time is ok (with merged files it is not...)
2781                // if not loop over run and look for the proper entry
2782                bool SECONDO_GIRO=false;
2783                Long64_t irun_start   = irun;
2784                int      offset_start = irunoffset[sel_tree->GetTreeNumber()];
2785                while (
2786                    (
2787                        (
2788                            !(abstime >= GetRunInfo()->RUNHEADER_TIME &&    // check on absolute time (s)
2789                              abstime <= GetRunInfo()->RUNTRAILER_TIME)
2790    //                      ||
2791    //                      !(obt >= GetRunInfo()->RUNHEADER_OBT &&         // additional check on OBT (ms)
2792    //                        obt <= GetRunInfo()->RUNTRAILER_OBT)
2793                            )
2794                        || GetRunInfo()->NEVENTS==0
2795                        )
2796    //              && irun < run_tree->GetEntries()
2797                    ){
2798    
2799                    if(DBG){
2800                        cout << " (test) ";
2801                        cout << " tree "<<sel_tree->GetTreeNumber();
2802                        cout << " irunt "<<irunt;
2803                        cout << " offset "<<irunoffset[sel_tree->GetTreeNumber()];
2804                        cout << " abs "<<abstime;
2805                        cout <<" >> "<<GetRunInfo()->RUNHEADER_TIME<<" "<<GetRunInfo()->RUNTRAILER_TIME;
2806                        cout << " obt "<<obt;
2807                        cout <<" >> "<<GetRunInfo()->RUNHEADER_OBT<<" "<<GetRunInfo()->RUNTRAILER_OBT;
2808                        cout << " *** JUMP RUN *** irun "<<irun;
2809    //              if(!SECONDO_GIRO)cout << " (don't worry)";
2810    //              else             cout << " (start worring...)";
2811                        cout << endl;
2812                    }
2813    //              irun++;
2814                    irunoffset[sel_tree->GetTreeNumber()]++;
2815                    irun = irunt + irunoffset[sel_tree->GetTreeNumber()];//NEWNEW          
2816                    if(irun == run_tree->GetEntries() && SECONDO_GIRO){
2817    //              if(irun == irun_start ){
2818                        cout << " ...grrrvzzkhhhajsdkj!!!! "<<endl;
2819                        irunoffset[sel_tree->GetTreeNumber()] = offset_start;
2820                        return false;
2821                    }
2822                    if( irun >= run_tree->GetEntries() || irun < 0){
2823                        cout << "irun = "<<irun<<" >>  search from the beginning... <<"<<endl;
2824                        SECONDO_GIRO=true;
2825                        irun=0;
2826                        irunoffset[sel_tree->GetTreeNumber()]=-irunt;
2827                    }
2828                    run_tree->GetEntry(irun);
2829                }
2830    
2831    
2832                if(DBG){
2833                    cout << " (test) ";
2834                    cout << " tree "<<sel_tree->GetTreeNumber();
2835                    cout << " irunt "<<irunt;
2836                    cout << " offset "<<irunoffset[sel_tree->GetTreeNumber()];
2837                    cout << " abs "<<abstime;
2838                    cout <<" >> "<<GetRunInfo()->RUNHEADER_TIME<<" "<<GetRunInfo()->RUNTRAILER_TIME;
2839                    cout << " obt "<<obt;
2840                    cout <<" >> "<<GetRunInfo()->RUNHEADER_OBT<<" "<<GetRunInfo()->RUNTRAILER_OBT;
2841                }
2842                cout << endl;
2843                cout << endl << " ))))) UPDATE RUN INFO (((((  @iev "<<iev<<" run "<<GetRunInfo()->ID<<" (run-entry "<<irun<<")"<<endl;
2844    //          cout << endl;
2845                prevshift = 0;
2846                return true;
2847            }
2848            return false;
2849        }
2850    
2851        return false;
2852        //
2853  };  };
2854  /**  /**
2855   * Update the runinfo informations (to be used to have Run infos event by event basis)   * Update the runinfo informations (to be used to have Run infos event by event basis)
2856   * @param run Pointer to the chain/tree which contains run infos   * @param run Pointer to the chain/tree which contains run infos
2857   * @return true if a new run has been read, false if it is still the same run   * @return true if a new run has been read, false if it is still the same run
2858   */   */
2859  Bool_t PamLevel2::UpdateRunInfo(TTree *run, ULong64_t iev){  Bool_t PamLevel2::UpdateRunInfo(TTree *run, Long64_t iev){
2860    return(UpdateRunInfo((TChain*)run,iev));      return(UpdateRunInfo((TChain*)run,iev));
2861  };  };
2862    
2863  //--------------------------------------  //--------------------------------------
# Line 1473  Bool_t PamLevel2::UpdateRunInfo(TTree *r Line 2867  Bool_t PamLevel2::UpdateRunInfo(TTree *r
2867  /**  /**
2868   * Set which trees shoul be analysed   * Set which trees shoul be analysed
2869   * @param detlist TString containing the sequence of trees required   * @param detlist TString containing the sequence of trees required
2870  */   */
2871  void PamLevel2::SetWhichTrees(TString detlist){  void PamLevel2::SetWhichTrees(TString detlist){
2872                
2873      if(detlist.IsNull() || detlist.Contains("+ALL", TString::kIgnoreCase)){  //    if(detlist.IsNull() || detlist.Contains("+ALL", TString::kIgnoreCase)){
2874        if( detlist.Contains("+ALL", TString::kIgnoreCase)){
2875    
2876            cout << " ======================================================== "<<endl;
2877            cout << "                       (( WARNING ))                      "<<endl;
2878            cout << " The meaning of the option +ALL has changed!!             "<<endl;
2879            cout << " Now it includes really all (level0+level1+level2+gpamela)"<<endl;
2880            cout << " and the file is discarded if it does not contain         "<<endl;
2881            cout << " all trees or  if level0 files are not available!!        "<<endl;
2882            cout << " ======================================================== "<<endl;
2883                
2884            CAL0 = true;
2885          CAL1 = true;          CAL1 = true;
2886          CAL2 = true;          CAL2 = true;
2887          TRK2 = true;          TRK2 = true;
2888          TRK1 = false;          TRK1 = true;
2889          TRKh = false;          TRKh = true;
2890            TRK0 = true;
2891          TRG = true;          TRG = true;
2892          TOF = true;          TOF = true;
2893            TOF0 = true;
2894          S4  = true;          S4  = true;
2895          ND  = true;          ND  = true;
2896          AC  = true;          AC  = true;
2897          ORB = true;          ORB = true;
2898            GP  = true;
2899      }else if( detlist.Contains("-ALL", TString::kIgnoreCase) ){      }else if( detlist.Contains("-ALL", TString::kIgnoreCase) ){
2900            CAL0 = false;
2901          CAL1 = false;          CAL1 = false;
2902          CAL2 = false;          CAL2 = false;
2903          TRK2 = false;          TRK2 = false;
2904          TRK1 = false;          TRK1 = false;
2905          TRKh = false;          TRKh = false;
2906            TRK0 = false;
2907          TRG = false;          TRG = false;
2908          TOF = false;          TOF = false;
2909            TOF0 = false;
2910          S4  = false;          S4  = false;
2911          ND  = false;          ND  = false;
2912          AC  = false;          AC  = false;
2913          ORB = false;          ORB = false;
2914            GP  = false;
2915      };      };
2916            
2917  //  -------------------------------------------------------------------------  //  -------------------------------------------------------------------------
# Line 1507  void PamLevel2::SetWhichTrees(TString de Line 2919  void PamLevel2::SetWhichTrees(TString de
2919          if ( detlist.Contains("-CAL1", TString::kIgnoreCase) )CAL1=false;          if ( detlist.Contains("-CAL1", TString::kIgnoreCase) )CAL1=false;
2920          if ( detlist.Contains("+CAL1", TString::kIgnoreCase) )CAL1=true;          if ( detlist.Contains("+CAL1", TString::kIgnoreCase) )CAL1=true;
2921      };      };
2922    
2923        if( detlist.Contains("CAL0", TString::kIgnoreCase) ){
2924            if ( detlist.Contains("-CAL0", TString::kIgnoreCase) )CAL0=false;
2925            if ( detlist.Contains("+CAL0", TString::kIgnoreCase) )CAL0=true;
2926        };
2927                    
2928      if( detlist.Contains("CAL2", TString::kIgnoreCase)){      if( detlist.Contains("CAL2", TString::kIgnoreCase)){
2929          if ( detlist.Contains("-CAL2", TString::kIgnoreCase) )CAL2=false;          if ( detlist.Contains("-CAL2", TString::kIgnoreCase) )CAL2=false;
# Line 1519  void PamLevel2::SetWhichTrees(TString de Line 2936  void PamLevel2::SetWhichTrees(TString de
2936          CAL1=false;          CAL1=false;
2937      }      }
2938  //  -------------------------------------------------------------------------  //  -------------------------------------------------------------------------
2939        if( detlist.Contains("TRK0", TString::kIgnoreCase) ){
2940            if ( detlist.Contains("-TRK0", TString::kIgnoreCase) )TRK0=false;
2941            if ( detlist.Contains("+TRK0", TString::kIgnoreCase) )TRK0=true;
2942        };
2943    
2944      if( detlist.Contains("TRK1", TString::kIgnoreCase) ){      if( detlist.Contains("TRK1", TString::kIgnoreCase) ){
2945          if ( detlist.Contains("-TRK1", TString::kIgnoreCase) )TRK1=false;          if ( detlist.Contains("-TRK1", TString::kIgnoreCase) )TRK1=false;
2946          if ( detlist.Contains("+TRK1", TString::kIgnoreCase) )TRK1=true;          if ( detlist.Contains("+TRK1", TString::kIgnoreCase) )TRK1=true;
# Line 1547  void PamLevel2::SetWhichTrees(TString de Line 2969  void PamLevel2::SetWhichTrees(TString de
2969            
2970      if( detlist.Contains("-TOF", TString::kIgnoreCase) )TOF = false;      if( detlist.Contains("-TOF", TString::kIgnoreCase) )TOF = false;
2971      else if( detlist.Contains("+TOF", TString::kIgnoreCase) )TOF = true;      else if( detlist.Contains("+TOF", TString::kIgnoreCase) )TOF = true;
2972    
2973        if( detlist.Contains("-TOF0", TString::kIgnoreCase) )TOF0 = false;
2974        else if( detlist.Contains("+TOF0", TString::kIgnoreCase) )TOF0 = true;
2975            
2976      if( detlist.Contains("-S4",  TString::kIgnoreCase) )S4  = false;      if( detlist.Contains("-S4",  TString::kIgnoreCase) )S4  = false;
2977      else if( detlist.Contains("+S4",  TString::kIgnoreCase) )S4  = true;      else if( detlist.Contains("+S4",  TString::kIgnoreCase) )S4  = true;
# Line 1560  void PamLevel2::SetWhichTrees(TString de Line 2985  void PamLevel2::SetWhichTrees(TString de
2985      if( detlist.Contains("-ORB", TString::kIgnoreCase) )ORB = false;      if( detlist.Contains("-ORB", TString::kIgnoreCase) )ORB = false;
2986      else if( detlist.Contains("+ORB", TString::kIgnoreCase) )ORB = true;      else if( detlist.Contains("+ORB", TString::kIgnoreCase) )ORB = true;
2987    
2988        if( detlist.Contains("-GP", TString::kIgnoreCase) )GP = false;
2989        else if( detlist.Contains("+GP", TString::kIgnoreCase) )GP = true;
2990    
2991        cout<< "tree/branch list from input --> ";
2992        if(TRK0)cout<<"TRK0 ";
2993        if(TRK1)cout<<"TRK1 ";
2994        if(TRK2)cout<<"TRK2 ";
2995        if(TRKh)cout<<"TRKH ";
2996        if(CAL0)cout<<"CAL0 ";
2997        if(CAL1)cout<<"CAL1 ";
2998        if(CAL2)cout<<"CAL2 ";
2999        if(TOF)cout<<"TOF ";
3000        if(TRG)cout<<"TRG ";
3001        if(AC)cout<<"AC ";
3002        if(ND)cout<<"ND ";
3003        if(S4)cout<<"S4 ";
3004        if(ORB)cout<<"ORB ";
3005        if(GP)cout<<"GP ";
3006        cout << endl;
3007  //     cout<< "Set detector list --> ";  //     cout<< "Set detector list --> ";
3008  //     if(TRK1)cout<<"TRK1 ";  //     if(TRK1)cout<<"TRK1 ";
3009  //     if(TRK2)cout<<"TRK2 ";  //     if(TRK2)cout<<"TRK2 ";
3010  //     if(TRKh)cout<<"TRKH ";  //     if(TRKh)cout<<"TRKH ";
3011  //     if(CAL1)cout<<"CAL1 ";  //     if(CAL1)cout<<"CAL1 ";
3012  //     if(CAL2)cout<<"CAL2 ";  //     if(CAL2)cout<<"CAL2 ";
3013    //     if(TOF0)cout<<"TOF0 ";
3014  //     if(TOF)cout<<"TOF ";  //     if(TOF)cout<<"TOF ";
3015  //     if(TRG)cout<<"TRG ";  //     if(TRG)cout<<"TRG ";
3016  //     if(AC)cout<<"AC ";  //     if(AC)cout<<"AC ";
# Line 1581  void PamLevel2::SetWhichTrees(TString de Line 3026  void PamLevel2::SetWhichTrees(TString de
3026   * Set tree/branch detector flags from the content of a tree   * Set tree/branch detector flags from the content of a tree
3027   */   */
3028  void  PamLevel2::GetWhichTrees(TFile* f){  void  PamLevel2::GetWhichTrees(TFile* f){
3029                
3030    
3031    
3032    //    cout << "void  PamLevel2::GetWhichTrees(TFile* f) --- WARNING!! --- ...potrebbe non funzionare "<<endl;
3033      // -----------      // -----------
3034      // reset flags      // reset flags
3035      // -----------      // -----------
# Line 1596  void  PamLevel2::GetWhichTrees(TFile* f) Line 3044  void  PamLevel2::GetWhichTrees(TFile* f)
3044      ND     = false;          ND     = false;    
3045      AC     = false;          AC     = false;    
3046      ORB    = false;          ORB    = false;    
3047        GP     = false;    
3048            
3049      RUN    = false;      RUN    = false;
3050                    
3051      cout << "Checking file: "<<f->GetName()<<endl;  //    cout << "Checking file: "<<f->GetName()<<endl;
3052      if( !f || f->IsZombie() ){      if( !f || f->IsZombie() ){
3053          cout << "File: "<< f->GetName() <<" Non valid root file"<< endl;          cout << "File: "<< f->GetName() <<" Non valid root file"<< endl;
3054          return;          return;
# Line 1686  void  PamLevel2::GetWhichTrees(TFile* f) Line 3135  void  PamLevel2::GetWhichTrees(TFile* f)
3135                  TRK2 = false;                  TRK2 = false;
3136                  TRKh = false;                  TRKh = false;
3137              }else nev=nevt;              }else nev=nevt;
3138              T->Delete();  //          T->Delete();
3139          };          };
3140          //=========================================================            //=========================================================  
3141          if( !strcmp(key->GetName(),"Calorimeter"    ) ){          if( !strcmp(key->GetName(),"Calorimeter"    ) ){
# Line 1702  void  PamLevel2::GetWhichTrees(TFile* f) Line 3151  void  PamLevel2::GetWhichTrees(TFile* f)
3151                  CAL1 = false;                  CAL1 = false;
3152                  CAL2 = false;                  CAL2 = false;
3153              }else nev=nevt;              }else nev=nevt;
3154              T->Delete();  //          T->Delete();
3155          };                };      
3156            //=========================================================  
3157            if( !strcmp(key->GetName(),"h20") ){
3158                GP = true;
3159                Int_t nevt = ((TTree*)f->Get("h20"))->GetEntries();
3160                if( nev && nevt!=nev){
3161                    cout << "File: "<< f->GetName() <<" h20 tree has "<<nevt<<" events instead of "<<nev<< endl;
3162                    GP = false;
3163                }else nev=nevt;
3164            }
3165    
3166      };      };
3167            
3168      delete lk;  //    delete lk;
3169    
3170  //     cout<< "Get detector list from input file --> ";      cout<< "tree/branch list from file  --> ";
3171  //     if(TRK1)cout<<"TRK1 ";      if(TRK1)cout<<"TRK1 ";
3172  //     if(TRK2)cout<<"TRK2 ";      if(TRK2)cout<<"TRK2 ";
3173  //     if(TRKh)cout<<"TRKH ";      if(TRKh)cout<<"TRKH ";
3174  //     if(CAL1)cout<<"CAL1 ";      if(CAL1)cout<<"CAL1 ";
3175  //     if(CAL2)cout<<"CAL2 ";      if(CAL2)cout<<"CAL2 ";
3176  //     if(TOF)cout<<"TOF ";      if(TOF)cout<<"TOF ";
3177  //     if(TRG)cout<<"TRG ";      if(TRG)cout<<"TRG ";
3178  //     if(AC)cout<<"AC ";      if(AC)cout<<"AC ";
3179  //     if(ND)cout<<"ND ";      if(ND)cout<<"ND ";
3180  //     if(S4)cout<<"S4 ";      if(S4)cout<<"S4 ";
3181  //     if(ORB)cout<<"ORB ";      if(ORB)cout<<"ORB ";
3182  //     cout << endl;      if(GP)cout<<"GP ";
3183        cout << endl;
3184                
3185      return ;      return ;
3186                    
# Line 1750  Bool_t  PamLevel2::CheckLevel2File(TStri Line 3209  Bool_t  PamLevel2::CheckLevel2File(TStri
3209      Bool_t ND__ok     = false;          Bool_t ND__ok     = false;    
3210      Bool_t AC__ok     = false;          Bool_t AC__ok     = false;    
3211      Bool_t ORB__ok    = false;          Bool_t ORB__ok    = false;    
3212        Bool_t GP__ok     = false;    
3213            
3214      Bool_t RUN__ok    = false;      Bool_t RUN__ok    = false;
3215            
3216            Bool_t SELLI__ok  = false;
3217    
3218      cout << "Checking file: "<<name<<endl;  //    cout << "Checking file: "<<name<<endl;
3219      TFile *f = new TFile(name.Data());      TFile *f = new TFile(name.Data());
3220      if( !f || f->IsZombie() ){      if( !f || f->IsZombie() ){
3221          cout << "File: "<< f->GetName() <<" discarded ---- Non valid root file"<< endl; return false;          cout << "File: "<< f->GetName() <<" discarded ---- Non valid root file"<< endl; return false;
# Line 1770  Bool_t  PamLevel2::CheckLevel2File(TStri Line 3230  Bool_t  PamLevel2::CheckLevel2File(TStri
3230    
3231      while( (key = (TKey*)next()) ){      while( (key = (TKey*)next()) ){
3232                    
3233    //      cout << key->GetName() << endl;
3234  //      cout << key->GetName() << ""<<key->GetClassName()<<endl;  //      cout << key->GetName() << ""<<key->GetClassName()<<endl;
3235  //              cout << " Get tree: " << f->Get(key->GetName())<<endl;  //              cout << " Get tree: " << f->Get(key->GetName())<<endl;
3236  //      nev_previous = nev;  //      nev_previous = nev;
# Line 1780  Bool_t  PamLevel2::CheckLevel2File(TStri Line 3241  Bool_t  PamLevel2::CheckLevel2File(TStri
3241  //          return false;  //          return false;
3242  //      };  //      };
3243    
3244            //=========================================================    
3245            // check if the file
3246            
3247    
3248          if( !strcmp(key->GetName(),"Run"        ) )RUN__ok = true;                if( !strcmp(key->GetName(),"Run"        ) )RUN__ok = true;      
3249    
3250          //=========================================================              //=========================================================    
3251            if( !strcmp(key->GetName(),"SelectionList"    ) ){
3252                SELLI__ok = true;
3253                if(SELLI==1){
3254                    Int_t nevt = ((TTree*)f->Get("SelectionList"))->GetEntries();
3255                    if( nev && nevt!=nev){
3256                        cout << "File: "<< f->GetName() <<" discarded ---- SelectionList tree has "<<nevt<<" events instead of "<<nev<< endl;
3257                        return false;
3258                    }
3259                    nev=nevt;
3260                }
3261            }
3262    
3263            //=========================================================    
3264          if( !strcmp(key->GetName(),"Trigger"    ) ){          if( !strcmp(key->GetName(),"Trigger"    ) ){
3265              TRG__ok = true;              TRG__ok = true;
3266              if(TRG){              if(TRG){
# Line 1892  Bool_t  PamLevel2::CheckLevel2File(TStri Line 3370  Bool_t  PamLevel2::CheckLevel2File(TStri
3370              };                  };    
3371              T->Delete();              T->Delete();
3372          };                };      
3373            //=========================================================    
3374            if( !strcmp(key->GetName(),"h20") ){
3375                ISGP = true;    
3376                GP__ok = true;
3377                if(GP){
3378                    Int_t nevt = ((TTree*)f->Get("h20"))->GetEntries();
3379                    if( nev && nevt!=nev){
3380                        cout << "File: "<< f->GetName() <<" discarded ---- OrbitalInfo tree has "<<nevt<<" events instead of "<<nev<< endl;
3381                        return false;
3382                    }
3383                    nev=nevt;
3384                }
3385            }
3386    
3387      };      };
3388    
3389        if( SELLI==-1 )SELLI = (Int_t)SELLI__ok;
3390        if( SELLI==0 && SELLI__ok ){
3391            cout << "File: "<< f->GetName() <<" discarded ---- found SelectionList (it is not a full-event file)" << endl;
3392            return false;  
3393        }
3394        if( SELLI==1 && !SELLI__ok ){
3395            cout << "File: "<< f->GetName() <<" discarded ---- SelectionList missing" << endl;
3396            return false;
3397        }
3398            
3399    //    cout << "SELLI "<<SELLI<<endl;
3400    
3401  //     cout<< "CheckLevel2File(TString): detector list --> ";  //     cout<< "CheckLevel2File(TString): detector list --> ";
3402  //     if(TRK1__ok)cout<<"TRK1 ";  //     if(TRK1__ok)cout<<"TRK1 ";
3403  //     if(TRK2__ok)cout<<"TRK2 ";  //     if(TRK2__ok)cout<<"TRK2 ";
# Line 1920  Bool_t  PamLevel2::CheckLevel2File(TStri Line 3423  Bool_t  PamLevel2::CheckLevel2File(TStri
3423    
3424    
3425      if(!RUN__ok) {      if(!RUN__ok) {
3426          cout << "File: "<< f->GetName() <<" *WARNING* ---- Missing RunInfo tree"<< endl;          cout << "File: "<< f->GetName() <<" *WARNING* ---- Missing RunInfo tree (NB: RUN infos will not be updated)"<< endl;
3427  //      return false;          RUN = false;
3428      };      };
3429    
3430      if(CAL1 && !CAL1__ok){      if(CAL1 && !CAL1__ok){
# Line 1969  Bool_t  PamLevel2::CheckLevel2File(TStri Line 3472  Bool_t  PamLevel2::CheckLevel2File(TStri
3472          cout << "File: "<< f->GetName() <<" discarded ---- Missing Trigger tree"<< endl;          cout << "File: "<< f->GetName() <<" discarded ---- Missing Trigger tree"<< endl;
3473          return false;          return false;
3474      };      };
3475        if(GP && !GP__ok){
3476            cout << "File: "<< f->GetName() <<" discarded ---- Missing h20 tree"<< endl;
3477            return false;
3478        };
3479            
3480    
3481  //    lk->Delete();  //    lk->Delete();
# Line 1987  Bool_t  PamLevel2::CheckLevel2File(TStri Line 3494  Bool_t  PamLevel2::CheckLevel2File(TStri
3494  //     if(ND)cout<<"ND ";  //     if(ND)cout<<"ND ";
3495  //     if(S4)cout<<"S4 ";  //     if(S4)cout<<"S4 ";
3496  //     if(ORB)cout<<"ORB ";  //     if(ORB)cout<<"ORB ";
3497    //     if(GP)cout<<"GP ";
3498  //     cout << endl;  //     cout << endl;
3499                
3500      return true;      return true;
# Line 2003  void PamLevel2::CreateCloneTrees0( TChai Line 3511  void PamLevel2::CreateCloneTrees0( TChai
3511      cout << "Create clones of PAMELA trees "<<endl;      cout << "Create clones of PAMELA trees "<<endl;
3512            
3513      Int_t i=0;      Int_t i=0;
3514      tree_clone[i] = fChain->GetTree()->CloneTree(0);      pam_tree_clone[i] = fChain->GetTree()->CloneTree(0);
3515      TString name =  tree_clone[i]->GetName();      TString name =  pam_tree_clone[i]->GetName();
3516      name.Append("_clone");      name.Append("_clone");
3517  //    tree_clone[i]->SetName(name.Data());  //    pam_tree_clone[i]->SetName(name.Data());
3518      cout << tree_clone[i]->GetName() <<endl;      cout << pam_tree_clone[i]->GetName() <<endl;
3519      i++;      i++;
3520    
3521      TList *li = fChain->GetListOfFriends();      TList *li = fChain->GetListOfFriends();
# Line 2017  void PamLevel2::CreateCloneTrees0( TChai Line 3525  void PamLevel2::CreateCloneTrees0( TChai
3525      while( (T_friend = (TFriendElement*)next()) ){      while( (T_friend = (TFriendElement*)next()) ){
3526  //      cout<<T_friend->IsA()->GetName()<<" "<<T_friend->GetName()<<hex << T_friend->GetTree() << dec<<endl;  //      cout<<T_friend->IsA()->GetName()<<" "<<T_friend->GetName()<<hex << T_friend->GetTree() << dec<<endl;
3527  //      cout<<T_friend->GetTree()->GetName()<< endl;  //      cout<<T_friend->GetTree()->GetName()<< endl;
3528          tree_clone[i] = T_friend->GetTree()->CloneTree(0);          pam_tree_clone[i] = T_friend->GetTree()->CloneTree(0);
3529          tree_clone[i]->SetAutoSave(1000000);          pam_tree_clone[i]->SetAutoSave(1000000);
3530          name =  tree_clone[i]->GetName();          name =  pam_tree_clone[i]->GetName();
3531          name.Append("_clone");          name.Append("_clone");
3532  //      tree_clone[i]->SetName(name.Data());  //      pam_tree_clone[i]->SetName(name.Data());
3533          cout << tree_clone[i]->GetName() << endl;          cout << pam_tree_clone[i]->GetName() << endl;
3534          i++;          i++;
3535      }      }
3536            
# Line 2037  void PamLevel2::CreateCloneTrees0( TChai Line 3545  void PamLevel2::CreateCloneTrees0( TChai
3545   */   */
3546  void PamLevel2::CreateCloneTrees(TFile *ofile){  void PamLevel2::CreateCloneTrees(TFile *ofile){
3547    
3548    
3549    //  if the pointer is null, create a default file
3550        if(!run_tree)return;
3551    
3552        if(!ofile){
3553            cout << "void PamLevel2::CreateCloneTrees(TFile*) -- WARNING -- Creating file: clone-tree.root "<<endl;
3554            ofile = new TFile("clone-tree.root","recreate");
3555        }
3556    
3557      ofile->cd();      ofile->cd();
3558    
3559      cout << "+--+--+--+--+--+--+--+--+--+--+--+--+--+--+--+--+--+" <<endl;      cout << "+--+--+--+--+--+--+--+--+--+--+--+--+--+--+--+--+--+" <<endl;
3560      cout << "Create new PAMELA trees "<<endl;      cout << "Create new PAMELA trees "<<endl;
3561                    
     Int_t i=0;  
3562    
3563        run_tree_clone = new TTree("Run","PAMELA Level2 data from the GL_RUN table ");
3564        run_tree_clone->Branch("RunInfo","GL_RUN",GetPointerTo("RunInfo"));
3565        cout << "Run          : branch RunInfo"<<endl;
3566        run_tree_clone->Branch("SoftInfo","SoftInfo",GetPointerTo("SoftInfo"));
3567        cout << "Run          : branch SoftInfo"<<endl;
3568        // ------------------
3569        // replicate run tree
3570        // ------------------
3571    //    cout << "----------------------------------------------------"<<endl;
3572    //    cout << "irun\t | RUN\t NEVENTS\t absolute time"<<endl;
3573        for (Int_t i=0; i<run_tree->GetEntries(); i++){
3574            run_tree->GetEntry(i);
3575    //      cout << i<< "\t | "<<GetRunInfo()->ID<<"\t "<<GetRunInfo()->NEVENTS<< "\t "<<GetRunInfo()->RUNHEADER_TIME<<" <---> "<<GetRunInfo()->RUNTRAILER_TIME<<endl;
3576            run_tree_clone->Fill();
3577        }
3578        cout << "----------------------------------------------------"<<endl;
3579    
3580        // ------------------------------------
3581        // add branch with dead and live times
3582        // ------------------------------------
3583        run_tree_clone->Branch("DeadLiveTime",totdltime,"dltime[3]/l");
3584        cout << "Run          : branch DeadLiveTime"<<endl;
3585    
3586    
3587        sel_tree_clone = new TTree("SelectionList","List of selected events ");
3588    //    sel_tree_clone->Branch("RunEntry",&irun,"runentry/L");
3589        sel_tree_clone->Branch("RunEntry",&irunt,"runentry/L");//NEWNEW
3590        sel_tree_clone->Branch("EventEntry",&irunentry,"eventry/L");
3591        
3592    
3593        Int_t i=0;
3594      if(TRK1||TRK2||TRKh){      if(TRK1||TRK2||TRKh){
3595          tree_clone[i] = new TTree("Tracker","PAMELA tracker level2 data ");              pam_tree_clone[i] = new TTree("Tracker","PAMELA tracker level2 data ");
3596          if(TRK1) {          if(TRK1) {
3597              tree_clone[i]->Branch("TrkLevel1","TrkLevel1", GetPointerTo("TrkLevel1"));              pam_tree_clone[i]->Branch("TrkLevel1","TrkLevel1", GetPointerTo("TrkLevel1"));
3598              tree_clone[i]->BranchRef();              pam_tree_clone[i]->BranchRef();
3599              cout << "Tracker      : branch TrkLevel1"<<endl;              cout << "Tracker      : branch TrkLevel1"<<endl;
3600    //          cout << "CreateCloneTrees " << GetTrkLevel1()<<endl;
3601          };          };
3602          if(TRK2) {          if(TRK2) {
3603              tree_clone[i]->Branch("TrkLevel2", "TrkLevel2",GetPointerTo("TrkLevel2"));              pam_tree_clone[i]->Branch("TrkLevel2", "TrkLevel2",GetPointerTo("TrkLevel2"));
3604              cout << "Tracker      : branch TrkLevel2"<<endl;                      cout << "Tracker      : branch TrkLevel2"<<endl;        
3605          };          };
3606          if(TRKh) {          if(TRKh) {
3607              tree_clone[i]->Branch("TrkHough","TrkHough", GetPointerTo("TrkHough"));              pam_tree_clone[i]->Branch("TrkHough","TrkHough", GetPointerTo("TrkHough"));
3608              cout << "Tracker      : branch TrkHough"<<endl;              cout << "Tracker      : branch TrkHough"<<endl;
3609          };          };
3610          i++;          i++;
# Line 2064  void PamLevel2::CreateCloneTrees(TFile * Line 3612  void PamLevel2::CreateCloneTrees(TFile *
3612    
3613      // Calorimeter      // Calorimeter
3614      if(CAL1||CAL2){      if(CAL1||CAL2){
3615          tree_clone[i] = new TTree("Calorimeter","PAMELA calorimeter level2 data ");              pam_tree_clone[i] = new TTree("Calorimeter","PAMELA calorimeter level2 data ");
3616          if(CAL1) {          if(CAL1) {
3617              tree_clone[i]->Branch("CaloLevel1", "CaloLevel1", GetPointerTo("CaloLevel1"));              pam_tree_clone[i]->Branch("CaloLevel1", "CaloLevel1", GetPointerTo("CaloLevel1"));
3618              cout << "Calorimeter  : branch CaloLevel1"<<endl;              cout << "Calorimeter  : branch CaloLevel1"<<endl;
3619          };          };
3620          if(CAL2) {          if(CAL2) {
3621              tree_clone[i]->Branch("CaloLevel2","CaloLevel2", GetPointerTo("CaloLevel2"));              pam_tree_clone[i]->Branch("CaloLevel2","CaloLevel2", GetPointerTo("CaloLevel2"));
3622              cout << "Calorimeter  : branch CaloLevel2"<<endl;              cout << "Calorimeter  : branch CaloLevel2"<<endl;
3623          };          };
3624          i++;          i++;
# Line 2078  void PamLevel2::CreateCloneTrees(TFile * Line 3626  void PamLevel2::CreateCloneTrees(TFile *
3626    
3627      // ToF          // ToF    
3628      if(TOF) {      if(TOF) {
3629          tree_clone[i] = new TTree("ToF","PAMELA ToF level2 data ");              pam_tree_clone[i] = new TTree("ToF","PAMELA ToF level2 data ");
3630          tree_clone[i]->Branch("ToFLevel2","ToFLevel2", GetPointerTo("ToFLevel2"));          pam_tree_clone[i]->Branch("ToFLevel2","ToFLevel2", GetPointerTo("ToFLevel2"));
3631          cout << "ToF          : branch ToFLevel2"<<endl;          cout << "ToF          : branch ToFLevel2"<<endl;
3632          i++;          i++;
3633      };      };
3634      // Trigger      // Trigger
3635      if(TRG) {      if(TRG) {
3636          tree_clone[i] = new TTree("Trigger","PAMELA trigger level2 data ");              pam_tree_clone[i] = new TTree("Trigger","PAMELA trigger level2 data ");
3637          tree_clone[i]->Branch("TrigLevel2","TrigLevel2", GetPointerTo("TrigLevel2"));          pam_tree_clone[i]->Branch("TrigLevel2","TrigLevel2", GetPointerTo("TrigLevel2"));
3638          cout << "Trigger      : branch TrigLevel2"<<endl;          cout << "Trigger      : branch TrigLevel2"<<endl;
3639          i++;          i++;
3640      };      };
3641      // S4      // S4
3642      if(S4) {      if(S4) {
3643          tree_clone[i] = new TTree("S4","PAMELA S4 level2 data ");                pam_tree_clone[i] = new TTree("S4","PAMELA S4 level2 data ");  
3644          tree_clone[i]->Branch("S4Level2","S4Level2", GetPointerTo("S4Level2"));          pam_tree_clone[i]->Branch("S4Level2","S4Level2", GetPointerTo("S4Level2"));
3645          cout << "S4           : branch S4Level2"<<endl;          cout << "S4           : branch S4Level2"<<endl;
3646          i++;          i++;
3647      };      };
3648      // Neutron Detector      // Neutron Detector
3649      if(ND) {      if(ND) {
3650          tree_clone[i] = new TTree("NeutronD","PAMELA neutron detector level2 data ");            pam_tree_clone[i] = new TTree("NeutronD","PAMELA neutron detector level2 data ");      
3651          tree_clone[i]->Branch("NDLevel2","NDLevel2", GetPointerTo("NDLevel2"));          pam_tree_clone[i]->Branch("NDLevel2","NDLevel2", GetPointerTo("NDLevel2"));
3652          cout << "NeutronD     : branch NDLevel2"<<endl;          cout << "NeutronD     : branch NDLevel2"<<endl;
3653          i++;          i++;
3654      };      };
3655      // Anticounters      // Anticounters
3656      if(AC) {      if(AC) {
3657          tree_clone[i] = new TTree("Anticounter","PAMELA anticounter detector level2 data ");              pam_tree_clone[i] = new TTree("Anticounter","PAMELA anticounter detector level2 data ");        
3658          tree_clone[i]->Branch("AcLevel2","AcLevel2", GetPointerTo("AcLevel2"));          pam_tree_clone[i]->Branch("AcLevel2","AcLevel2", GetPointerTo("AcLevel2"));
3659          cout << "Anticounter  : branch AcLevel2"<<endl;          cout << "Anticounter  : branch AcLevel2"<<endl;
3660          i++;          i++;
3661      };      };
3662      // OrbitalInfo      // OrbitalInfo
3663      if(ORB) {      if(ORB) {
3664          tree_clone[i] = new TTree("OrbitalInfo","PAMELA oribital info  ");                pam_tree_clone[i] = new TTree("OrbitalInfo","PAMELA oribital info  ");  
3665          tree_clone[i]->Branch("OrbitalInfo","OrbitalInfo", GetPointerTo("OrbitalInfo"));          pam_tree_clone[i]->Branch("OrbitalInfo","OrbitalInfo", GetPointerTo("OrbitalInfo"));
3666            cout << "OrbitalInfo  : branch OrbitalInfo"<<endl;
3667            i++;
3668        };
3669        // GPamela
3670        if(GP) {
3671            pam_tree_clone[i] = new TTree("h20","PAMELA oribital info  ");  
3672            pam_tree_clone[i]->Branch("GPamela","GPamela", GetPointerTo("GPamela"),32000,1);//split
3673          cout << "OrbitalInfo  : branch OrbitalInfo"<<endl;          cout << "OrbitalInfo  : branch OrbitalInfo"<<endl;
3674          i++;          i++;
3675      };      };
# Line 2129  void PamLevel2::CreateCloneTrees(TFile * Line 3684  void PamLevel2::CreateCloneTrees(TFile *
3684   */   */
3685  //void PamLevel2::FillNewPamTree(TTree *T){  //void PamLevel2::FillNewPamTree(TTree *T){
3686  void PamLevel2::FillCloneTrees(){  void PamLevel2::FillCloneTrees(){
3687                
3688      for(Int_t i=0; i<8; i++){  //    cout << "PamLevel2::FillCloneTrees()" << irunentry << endl;
3689          if(tree_clone[i])tree_clone[i]->Fill();  
3690        for(Int_t i=0; i<NCLONES; i++){
3691            if(pam_tree_clone[i])pam_tree_clone[i]->Fill();
3692      }      }
3693        if(sel_tree_clone)sel_tree_clone->Fill();    
3694    
3695  }  }
3696    
3697    
3698  TTree* PamLevel2::GetCloneTree(TString name){  TTree* PamLevel2::GetCloneTree(TString name){
3699    
3700      for(Int_t i=0; i<8; i++){        for(Int_t i=0; i<NCLONES; i++){    
3701          if(tree_clone[i]){          if(pam_tree_clone[i]){
3702              TString na = tree_clone[i]->GetName();              TString na = pam_tree_clone[i]->GetName();
3703              if(!name.CompareTo(na))return tree_clone[i];              if(!name.CompareTo(na))return pam_tree_clone[i];
3704          };          };
3705      }      }
3706        if(run_tree_clone){
3707            TString na = run_tree_clone->GetName();
3708            if(!name.CompareTo(na))return run_tree_clone;
3709        }
3710        if(sel_tree_clone){
3711            TString na = sel_tree_clone->GetName();
3712            if(!name.CompareTo(na))return sel_tree_clone;
3713        }
3714      return NULL;      return NULL;
3715    
3716  }  }
3717  void PamLevel2::WriteCloneTrees(){  void PamLevel2::WriteCloneTrees(){
3718      cout << "+--+--+--+--+--+--+--+--+--+--+--+--+--+--+--+--+--+" <<endl;      cout << "+--+--+--+--+--+--+--+--+--+--+--+--+--+--+--+--+--+" <<endl;
3719      cout << "Write clones of PAMELA trees "<<endl;      cout << "Write clones of PAMELA trees "<<endl;
3720      for(Int_t i=0; i<8; i++){        cout << run_tree_clone->GetName()<<endl;  
3721          if(tree_clone[i]){      if(run_tree_clone->GetBranch("DeadLiveTime")->GetEntries() < run_tree->GetEntries())
3722              cout << tree_clone[i]->GetName()<<endl;          run_tree_clone->GetBranch("DeadLiveTime")->Fill();
3723              tree_clone[i]->Write();      run_tree_clone->Write();
3724        cout << sel_tree_clone->GetName()<<endl;    
3725        sel_tree_clone->Write();
3726        for(Int_t i=0; i<NCLONES; i++){    
3727            if(pam_tree_clone[i]){
3728                cout << pam_tree_clone[i]->GetName()<<endl;
3729                pam_tree_clone[i]->Write();
3730          };          };
3731      }      }
3732      cout << "+--+--+--+--+--+--+--+--+--+--+--+--+--+--+--+--+--+" <<endl;      cout << "+--+--+--+--+--+--+--+--+--+--+--+--+--+--+--+--+--+" <<endl;
# Line 2161  void PamLevel2::WriteCloneTrees(){ Line 3734  void PamLevel2::WriteCloneTrees(){
3734  }  }
3735    
3736  /**  /**
3737   * Create a new (empty) Pamela trees   * Method to get level2-trees entry, the corresponding run entry and (if required) the level0 entry.
3738   */   */
3739  // TTree* PamLevel2::GetNewPamTree(){  //Int_t PamLevel2::GetEntry(Int_t iee){
3740    Int_t PamLevel2::GetEntry(Long64_t iee){
3741        
3742    //     cout << "-------------------------------------"<<endl;
3743    //     cout << "Int_t PamLevel2::GetEntry("<<iee<<")"<<endl;
3744    
3745        if(!pam_tree){
3746            cout << " Int_t PamLevel2::GetEntry(Int_t) -- ERROR -- level2 trees not loaded"<<endl;
3747            return 0;
3748        }
3749    
3750    
3751  //     if(tree_clone)return tree_clone;      //
3752        // This is a sort of bug: if you don't have the run tree you don't want to exit here you want to have loaded the event anyway...
3753        //
3754        //    if(!run_tree ){
3755        //  cout << " Int_t PamLevel2::GetEntry(Int_t) -- ERROR -- run tree not loeaded"<<endl;
3756        //  return 0;
3757        //    }
3758    
3759        Long64_t ii=0;
3760        //-------------------------------
3761        ii = iee;
3762        if( !pam_tree->GetEntry(ii) ){      
3763            cout << " Int_t PamLevel2::GetEntry(Int_t) -- ERROR -- error reading pam tree"<<endl;
3764            return 0;
3765        }
3766    
3767        //
3768        // ... that's way I put it here. Notice that nothing change in the code (is backward compatible) since in any case you return with 0.
3769        // in theory one would like to return 1 if run is not loaded but now I don't have the will to add that 2 lines of code and it is not
3770        // a problem if you don't check the return code of getentry.
3771        //
3772        if(!RUN || !run_tree ){
3773            if ( TRK0 || CAL0 || TOF0 || RUN ) { //forse cosi` va bene per tornare 1?
3774                cout << " Int_t PamLevel2::GetEntry(Int_t) -- ERROR -- run tree not loaded"<<endl;
3775                return 0;
3776            }  else {
3777                return 1; //cosi` se non c'e` run esce qua...
3778            }
3779        }
3780    
3781        //-------------------------------
3782        ii = iee;
3783    //    Bool_t UPDATED = UpdateRunInfo(run_tree,ii);
3784    //    Bool_t UPDATED = UpdateRunInfo(ii);
3785        UpdateRunInfo(ii);
3786        if(SELLI==0)irunentry = iee-runfirstentry;
3787    //    if(UPDATED && run_tree_clone)run_tree_clone->Fill();
3788      
3789    //    cout << "PamLevel2::GetEntry("<<iee<<") "<<irun<<" "<<runfirstentry<<" "<<irunentry<<endl;
3790    
3791    //     cout << "irunentry     "<<irunentry << endl;
3792    //     cout << "runfirstentry "<<runfirstentry << endl;
3793    //     cout << "nevents       "<<GetRunInfo()->NEVENTS<< endl;
3794    
3795    //     if( TRK0 || CAL0 || TOF0 ){
3796    //      if( !GetYodaEntry( ) ){
3797    //          cout << " Int_t PamLevel2::GetEntry(Int_t) -- ERROR -- error reading level0 tree"<<endl;
3798    //          return 0;
3799    //      }
3800    //     }
3801    
3802    
3803        return 1;
3804    
3805    }
3806    
3807    TrkLevel0    *PamLevel2::GetTrkLevel0(){
3808        if( !TRK0 )return NULL;
3809        if( !GetYodaEntry( ) ){
3810            cout << " Int_t PamLevel2::GetTrkLevel0() -- ERROR -- error reading level0 tree"<<endl;
3811            return 0;
3812        }
3813        return trk0_obj;
3814    };
3815    CaloLevel0    *PamLevel2::GetCaloLevel0(){
3816        if( !CAL0 )return NULL;
3817        if( !GetYodaEntry( ) ){
3818            cout << " Int_t PamLevel2::GetCaloLevel0() -- ERROR -- error reading level0 tree"<<endl;
3819            return 0;
3820        }
3821        return calo0_obj;
3822    };
3823    
3824  //     TTree *Tout = 0;  
3825    /**
3826     * Method to retrieve the level0 tree (YODA tree) that contains the current event.
3827     * Given the run ID (...), if needed it query the DB and load the proper file.
3828     * @return Pointer to the tree
3829     */
3830    
3831    
3832    TTree* PamLevel2::GetYodaTree( ){
3833        
3834    //    cout << "TTree* PamLevel2::GetYodaTree( )"<<endl;
3835        //===================================
3836        // check if iroot has changed
3837        //===================================
3838        if( irun<0 ){
3839            cout << "PamLevel2::GetYodaTree() -- ERROR -- irun = "<<irun<<endl;
3840    //      cout << "In order to use this method you have to first load the RunInfo tree "<<endl;
3841            return NULL;
3842        }    
3843        Int_t irootnew = run_obj->ID_ROOT_L0;
3844    //      cout << "iroot    "<<iroot<<endl;
3845    //      cout << "irootnew "<<irootnew<<endl;
3846    
3847        //===================================
3848        // load the level0 file
3849        // (if not already loaded)
3850        //===================================
3851        if( iroot != irootnew || !l0_tree){
3852            iroot = irootnew;
3853            //===================================
3854            // open the DB connection
3855            // (if not already opened)
3856            //===================================
3857            if(!dbc || (dbc && !dbc->IsConnected()))SetDBConnection();
3858            GL_ROOT glroot = GL_ROOT();
3859            if( glroot.Query_GL_ROOT(iroot,dbc) ){
3860                cout << "TTree* PamLevel2::GetYodaTree( ) -- ERROR -- level0 file iroot = "<<iroot<< " does not exists"<<endl;
3861                return NULL;
3862            };
3863            TString filename = glroot.PATH + glroot.NAME;
3864            if(l0_file){
3865                l0_file->Close();
3866                l0_file->Delete();
3867            }
3868            cout << "Opening LEVEL0 file: "<< filename << endl;
3869            FileStat_t t;
3870            if( gSystem->GetPathInfo(filename.Data(),t) ){
3871                cout << " PamLevel2::GetYodaTree() -- ERROR opening file "<<endl;
3872                return NULL;
3873            }
3874            l0_file = new TFile(filename);
3875            if( !l0_file )return NULL;
3876            l0_tree = (TTree*)l0_file->Get("Physics");
3877            if(!h0_obj)h0_obj = new EventHeader();
3878            l0_tree->SetBranchAddress("Header" ,&h0_obj);
3879            prevshift = 0;
3880            //---------------------------------------------------
3881            // TRACKER:
3882            if(TRK0){
3883                if(!trk0_obj){
3884                    trk0_obj = new TrkLevel0();
3885                    trk0_obj->Set();
3886                };
3887                l0_tree->SetBranchAddress("Tracker" ,trk0_obj->GetPointerToTrackerEvent());
3888            }
3889            //--------------------------------------------------
3890            // CALORIMETER:
3891            if(CAL0){
3892                if(!calo0_obj){
3893                    calo0_obj = new CaloLevel0();
3894                    calo0_obj->Set();
3895                };
3896                l0_tree->SetBranchAddress("Calorimeter" ,calo0_obj->GetPointerToCalorimeterEvent());
3897                //      cout << "PamLevel2::GetYodaTree() --- level0 calorimeter not implemented "<<endl;
3898            }
3899            //---------------------------------------------------
3900            // TOF:
3901            if(TOF0){
3902                cout << "PamLevel2::GetYodaTree() --- level0 TOF not implemented "<<endl;
3903            }
3904    
3905            dbc->Close(); // EMILIANO, do not leave open connections, open only when needed
3906    
3907    
3908        };
3909    
3910    //     if(!dbc || (dbc && !dbc->IsConnected())){
3911    //      cout << " TTree* PamLevel2::GetYodaTree( ) -- no DB connected... hai fatto qualche cazzata "<<endl;
3912    //     }
3913    
3914        if ( TRK0 ){
3915            TrkParams::Load(6);
3916            if( !TrkParams::IsLoaded(6) ){
3917                cout << " TTree* PamLevel2::GetYodaTree( ) -- WARNING -- VK-mask not loaded"<<endl;
3918            };
3919            if(!dbc || (dbc && !dbc->IsConnected()))SetDBConnection();
3920            TrkParams::SetCalib(run_obj,dbc);
3921            TrkParams::LoadCalib( );
3922            if( !TrkParams::CalibIsLoaded() ){
3923                cout << " TTree* PamLevel2::GetYodaTree( ) -- WARNING -- Calibration not loaded"<<endl;
3924            };
3925            dbc->Close(); // EMILIANO, do not leave open connections, open only when needed
3926        }
3927    
3928    
3929    //    cout << l0_tree << endl;
3930        return l0_tree;
3931    
3932    }
3933    
3934    /**
3935     * Method to retrieve the level0 tree (YODA tree) that contains the current event.
3936     */
3937    Int_t PamLevel2::GetYodaEntry(){
3938    
3939    //    cout << "Int_t PamLevel2::GetYodaEntry()"<<endl;
3940        if(!GetYodaTree())return 0;
3941            
3942  //     cout << "+--+--+--+--+--+--+--+--+--+--+--+--+--+--+--+--+--+" <<endl;      // patch
3943  //     cout << "Create new PAMELA trees "<<endl;      if( irunentry < 0){
3944    //      cout << "Int_t PamLevel2::GetYodaEntry() -- ATTENZIONE -- irunentry negativo?!?! "<<(Int_t)irunentry<<endl;
3945            irunentry=0LL;
3946        }
3947        //  ---------------------------------
3948        //  if file is NOT a preselected file
3949        //  ---------------------------------
3950        Long64_t quellagiusta = irunentry + (Long64_t)(run_obj->EV_FROM);
3951    //     cout << " irunentry "<<irunentry<<endl;
3952    //     cout << " EV_FROM "<<run_obj->EV_FROM<<endl;
3953    //     cout << " quellagiusta = irunentry + EV_FROM "<< quellagiusta << endl;
3954    
3955    //     cout << " irun "<< irun << " irunentry "<< irunentry<<" run_obj->EV_FROM "<<run_obj->EV_FROM <<" quella giusta "<<quellagiusta << endl;
3956    //     cout << " iroot "<<iroot<<" run_obj->ID_ROOT_L0 "<<run_obj->ID_ROOT_L0<<endl;
3957    //     cout << " time "<< abstime << endl;
3958    //     cout << " trk_calib_used "<<run_obj->TRK_CALIB_USED<< endl;
3959        
3960        ULong64_t obt     = 0;
3961        ULong64_t pktn    = 0;
3962        if( GetOrbitalInfo() ){
3963            obt     = GetOrbitalInfo()->OBT;
3964            pktn    = GetOrbitalInfo()->pkt_num;
3965        }
3966    
3967        if( !GetOrbitalInfo() && !ISGP){
3968            cout << "Int_t PamLevel2::GetYodaEntry() -- ERROR -- missing OrbitalInfo "<<endl;
3969            return 0;
3970        }
3971        if( obt==0 && pktn==0 && !ISGP ){
3972            cout << "Int_t PamLevel2::GetYodaEntry() -- ERROR -- level2 event corrupted ?? "<<endl;
3973            return 0;
3974        }
3975    
3976        // ---------------------------------------------------------------------
3977        // ATTENTION!!!
3978        // If data are not pre-processed with cleaner, the level0 tree may contain
3979        // spurious nested physics packets.
3980        // The GL_RUN variables EV_FROM, EV_TO and NEVENTS counts also these entries
3981        // while level2 tree DOES NOT!!
3982        // This means that "quellagiusta" in these cases is not correct.
3983        // In order to retrieve the correct level0 event, I implemented a check
3984        // of the OBT and pkt-number. In case of mismatch, the level0 entry number
3985        // is shift forward until when the packets match.
3986        // ---------------------------------------------------------------------
3987        Int_t answer = 0;
3988        Int_t shift =0;
3989        //    printf(" siamo qui %i %i \n",shift,prevshift);
3990        //    Int_t maxshift = 50; // EMILIANO
3991        do{
3992            if(shift>0){    
3993                cout << " PKTNUM  L2 --- "<< pktn << " --- L0 --- "<< GetEventHeader()->GetPscuHeader()->GetCounter()<<endl;
3994                cout << "         RUN: ID "<< GetRunInfo()->ID << " ID_ROOT_L0 "<<run_obj->ID_ROOT_L0<<" ID_RUN_FRAG "<<GetRunInfo()->ID_RUN_FRAG << " EV_FROM "<<GetRunInfo()->EV_FROM  <<endl;
3995                cout << "         L2 <--> L0 mismatch ( irun "<<irun<<" irunentry "<<irunentry<<" shift "<<shift<<" prevshift "<<prevshift<<" )"<<endl;
3996            }
3997            answer = l0_tree->GetEntry(quellagiusta+(Long64_t)shift+(Long64_t)prevshift);
3998            shift++;
3999            if( !GetEventHeader() ){
4000                cout << "Int_t PamLevel2::GetYodaEntry() -- ERROR -- missing EventHeader "<<endl;
4001                return 0;
4002            }
4003    
4004            if(ISGP){
4005                obt = (UInt_t)(GetEventHeader()->GetPscuHeader()->GetOrbitalTime()); //BARBATRUCCO
4006                pktn = (UInt_t)(GetEventHeader()->GetPscuHeader()->GetCounter()); //BARBATRUCCO
4007            }
4008    
4009    //      cout << "PKTNUM "<<shift<<" ==  L2 --- "<< pktn << " --- L0 --- "<< GetEventHeader()->GetPscuHeader()->GetCounter()<<endl;
4010    //      cout << " L2 --- "<< obt << " --- L0 --- "<< GetEventHeader()->GetPscuHeader()->GetOrbitalTime()<<endl;
4011    //      if( (quellagiusta+shift) == l0_tree->GetEntries()+1 )cout << ">>> end of level0 tree <<<"<<endl;
4012    //      cout << " obt "<< obt << endl;
4013    //      cout << " GetEventHeader()->GetPscuHeader()->GetOrbitalTime() "<< GetEventHeader()->GetPscuHeader()->GetOrbitalTime() << endl;
4014    //      cout << " pktn "<< pktn << endl;
4015    //      cout << " GetEventHeader()->GetPscuHeader()->GetCounter() "<< GetEventHeader()->GetPscuHeader()->GetCounter() << endl;
4016    //      printf(" IDRUN %u \n",GetRunInfo()->ID);
4017    //
4018            if ( prevshift != 0 && (quellagiusta+(Long64_t)shift) == GetYodaTree()->GetEntries() ){
4019                prevshift = 0;
4020                shift = -1;
4021            };
4022    
4023        }while( ( obt != (UInt_t)(GetEventHeader()->GetPscuHeader()->GetOrbitalTime()) ||
4024                  pktn != (UInt_t)(GetEventHeader()->GetPscuHeader()->GetCounter())       )
4025                && (quellagiusta+(Long64_t)shift) < GetYodaTree()->GetEntries() && shift < maxshift);
4026    
4027        if ( (quellagiusta+(Long64_t)shift+(Long64_t)prevshift) > GetYodaTree()->GetEntries() || shift == maxshift ) {
4028            cout << " Big trouble here, no such event in Level0 data! " <<endl;
4029            return 0;
4030        }
4031    //    cout << "LA ENTRY GIUSTA E`: "<<quellagiusta<<" (spero...)"<<endl;
4032    //    return GetYodaTree()->GetEntry(quellagiusta);
4033        if ( shift > 1 ) prevshift += (shift-1);
4034            
4035        return answer;
4036            
4037  //     if(TRK1||TRK2||TRKh){  }
4038  //      TTree *T = new TTree("Tracker_clone","PAMELA tracker level2 data ");      /**
4039  //      if(TRK1) {   * \Brief Set DB connection
4040  //          trk1_clone = new TrkLevel1();   */
4041  //          T->Branch("TrkLevel1","TrkLevel1", &trk1_clone);  Bool_t PamLevel2::SetDBConnection(){
 //          T->BranchRef();  
 //          cout << "Tracker      : branch TrkLevel1"<<endl;  
 //      };  
 //      if(TRK2) {  
 //          trk2_clone = new TrkLevel2();  
 //          T->Branch("TrkLevel2", "TrkLevel2",&trk2_clone);  
 //          cout << "Tracker      : branch TrkLevel2"<<endl;          
 //      };  
 //      if(TRKh) {  
 //          trkh_clone = new TrkHough();  
 //          T->Branch("TrkHough","TrkHough", &trkh_clone);  
 //          cout << "Tracker      : branch TrkHough"<<endl;  
 //      };  
 //      if(!Tout)Tout=T;  
 //      else Tout->AddFriend("Tracker_clone");  
 //     }  
4042    
4043  //     // Calorimeter      cout<<"~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~"<<endl;
4044  //     if(CAL1||CAL2){      cout<<"Connecting to DB"<<endl;
4045  //      TTree *C = new TTree("Calorimeter_clone","PAMELA calorimeter level2 data ");          cout<<"HOST "<<host<<endl;
4046  //      if(CAL1) {      cout<<"USER "<<user<<endl;
4047  //          calo1_clone = new CaloLevel1();      cout<<"PSW  "<<psw<<endl;
4048  //          C->Branch("CaloLevel1", "CaloLevel1", &calo1_clone);      dbc = TSQLServer::Connect(host.Data(),user.Data(),psw.Data());
4049  //          cout << "Calorimeter  : branch CaloLevel1"<<endl;      if( !dbc )return false;
4050  //      };      if( !dbc->IsConnected() )return false;    
4051  //      if(CAL2) {      stringstream myquery;  // EMILIANO
4052  //          calo2_clone = new CaloLevel2();      myquery.str("");  // EMILIANO
4053  //          C->Branch("CaloLevel2","CaloLevel2", &calo2_clone);      myquery << "SET time_zone='+0:00'";  // EMILIANO
4054  //          cout << "Calorimeter  : branch CaloLevel2"<<endl;      dbc->Query(myquery.str().c_str());  // EMILIANO
4055  //      };      cout<<"~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~"<<endl;
4056  //      if(!Tout)Tout=C;      return true;
 //      else Tout->AddFriend("Calorimeter_clone");  
 //     }      
   
 //     // ToF      
 //     if(TOF) {  
 //      TTree *O = new TTree("ToF_clone","PAMELA ToF level2 data ");      
 //      tof_clone = new ToFLevel2();  
 //      O->Branch("ToFLevel2","ToFLevel2", &tof_clone);  
 //      cout << "ToF          : branch ToFLevel2"<<endl;  
 //      if(!Tout)Tout=O;  
 //      else Tout->AddFriend("ToF_clone");  
 //     };  
 //     // Trigger  
 //     if(TRG) {  
 //      TTree *R = new TTree("Trigger_clone","PAMELA trigger level2 data ");      
 //      trig_clone = new TrigLevel2();  
 //      R->Branch("TrigLevel2","TrigLevel2", &trig_clone);  
 //      cout << "Trigger      : branch TrigLevel2"<<endl;  
 //      if(!Tout)Tout=R;  
 //      else Tout->AddFriend("Trigger_clone");  
 //     };  
 //     // S4  
 //     if(S4) {  
 //      TTree *S = new TTree("S4_clone","PAMELA S4 level2 data ");        
 //      s4_clone = new S4Level2();  
 //      S->Branch("S4Level2","S4Level2", &s4_clone);  
 //      cout << "S4           : branch S4Level2"<<endl;  
 //      if(!Tout)Tout=S;  
 //      else Tout->AddFriend("S4_clone");  
 //     };  
 //     // Neutron Detector  
 //     if(ND) {  
 //      TTree *N = new TTree("NeutronD_clone","PAMELA neutron detector level2 data ");    
 //      nd_clone = new NDLevel2();  
 //      N->Branch("NDLevel2","NDLevel2", &nd_clone);  
 //      cout << "NeutronD     : branch NDLevel2"<<endl;  
 //      if(!Tout)Tout=N;  
 //      else Tout->AddFriend("NeutronD_clone");  
 //     };  
 //     // Anticounters  
 //     if(AC) {  
 //      TTree *A = new TTree("Anticounter_clone","PAMELA anticounter detector level2 data ");    
 //      ac_clone = new AcLevel2();  
 //      A->Branch("AcLevel2","AcLevel2", &ac_clone);  
 //      cout << "Anticounter  : branch AcLevel2"<<endl;  
 //      if(!Tout)Tout=A;  
 //      else Tout->AddFriend("Anticounter_clone");  
 //     };  
 //     // OrbitalInfo  
 //     if(ORB) {  
 //      TTree *B = new TTree("OrbitalInfo_clone","PAMELA oribital info  ");      
 //      orb_clone = new OrbitalInfo();  
 //      B->Branch("OrbitalInfo","OrbitalInfo", &orb_clone);  
 //      cout << "OrbitalInfo  : branch OrbitalInfo"<<endl;  
 //      if(!Tout)Tout=B;  
 //      else Tout->AddFriend("OrbitalInfo_clone");  
 //     };  
 //     cout << "+--+--+--+--+--+--+--+--+--+--+--+--+--+--+--+--+--+" <<endl;  
4057    
4058  //     tree_clone = Tout;  }
 //     tree_clone->SetDirectory(0);  
4059    
4060  //     return Tout;  /**
4061  // }   * \Brief Add a friend to the pamela chain.
4062  // /**   * @param cname name of the chain to be added
4063  //  * Fill a tree (created with GetNewPamTree)   */
4064  //  *  
4065  //  */  TChain* PamLevel2::AddFriend(TString cname){
4066  // //void PamLevel2::FillNewPamTree(TTree *T){  
4067  // void PamLevel2::FillNewPamTree(){      if(!GetPamTree()){
4068                    cout << " TChain* PamLevel2::AddFriend(TString cname) --- a pamela tree must be created first"<<endl;
4069            return NULL;
4070        }
4071    
4072    
4073        TChain *c = new TChain( cname.Data() );
4074    
4075        TIter next( GetPamTree()->GetListOfFiles() );
4076        Int_t nf = 0;
4077        TChainElement* element = 0;    
4078        while ((element = (TChainElement*) next())) {      
4079            c->Add(element->GetTitle());
4080            nf++;
4081        }
4082    
4083        GetPamTree()->AddFriend(cname.Data());
4084    
4085        cout << "external chain created and added to pamela friends :"<<cname<<endl;
4086        cout << "n.files "<<nf<<endl;
4087        
4088    
4089        return c;    
4090    
4091    }
4092    
 //     if(trk1_clone)  *trk1_clone = *trk1_obj;  
 //     if(trk2_clone){  
 //      trk2_clone->Clear();  
 //      trk2_obj->Copy(*trk2_clone);  
 // //   *trk2_clone = *trk2_obj;  
 //     }  
 //     if(trkh_clone)  *trkh_clone = *trkh_obj;  
 //     if(calo1_clone){  
 // //   *calo1_clone = *calo1_obj;  
 //      calo1_clone->Clear();  
 //      calo1_obj->Copy(*calo1_clone);  
 //     }  
 //     if(calo2_clone){  
 // //   *calo2_clone = *calo2_obj;  
 //      calo2_clone->Clear();  
 //      calo2_obj->Copy(*calo2_clone);  
 //     }  
 //     if(tof_clone)   *tof_clone  = *tof_obj;  
 //     if(trig_clone)  *trig_clone = *trig_obj;  
 //     if(s4_clone)    *s4_clone   = *s4_obj;  
 //     if(nd_clone)    *nd_clone   = *nd_obj;  
 //     if(ac_clone)    *ac_clone   = *ac_obj;  
 //     if(orb_clone)   *orb_clone  = *orb_obj;  
   
 //     TTree *T = tree_clone;  
   
 //     T->Fill(); //fill main tree  
 // //    cout<<T->IsA()->GetName()<<" "<<T->GetName()<<endl;  
 //     TList *li = T->GetListOfFriends();  
 //     TIter next(li);  
 //     TFriendElement* T_friend=0;  
 //     while( (T_friend = (TFriendElement*)next()) ){  
 // //   cout<<T_friend->IsA()->GetName()<<" "<<T_friend->GetName()<<hex << T_friend->GetTree() << dec<<endl;  
 //      T_friend->GetTree()->Fill();//fill friends  
 //     }  
4093    
 // }  
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