/[PAMELA software]/PamelaLevel2/src/PamLevel2.cpp
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revision 1.31 by mocchiut, Mon Mar 19 05:39:36 2007 UTC revision 1.109 by mocchiut, Tue Oct 21 10:08:36 2014 UTC
# Line 1  Line 1 
1  #include <PamLevel2.h>  #include <PamLevel2.h>
2    
3    /////////////////////////////////////////////////////////////////////////////
4    /////////////////////////////////////////////////////////////////////////////
5    /////////////////////////////////////////////////////////////////////////////
6    /////////////////////////////////////////////////////////////////////////////
7    
8    void GPamela::Clear() {
9      Irun = 0;
10      Ievnt = 0;
11      Ipa = 0;
12      X0 = 0.;
13      Y0 = 0.;
14      Z0 = 0.;
15      Theta = 0.;
16      Phi = 0.;
17      P0 = 0.;
18      Nthtof = 0;
19      Nthcat = 0;
20      Nthcas = 0;
21      Nthspe = 0;
22      Nstrpx = 0;
23      Nstrpy = 0;
24      Nthcali = 0;
25      Nthcal = 0;
26      Nthnd = 0;
27      Nthcard = 0;
28    }
29    
30    void GPamela::Delete() {
31    
32      Clear();
33      /* EM all these are in the stack not in the heap, so no need to delete by hand...
34      delete[] Ipltof;
35      delete[] Ipaddle;
36      delete[] Ipartof;
37      delete[] Xintof;
38      delete[] Yintof;
39      delete[] Zintof;
40      delete[] Xouttof;
41      delete[] Youttof;
42      delete[] Zouttof;
43      delete[] Ereltof;
44      delete[] Timetof;
45      delete[] Pathtof;
46      delete[] P0tof;
47      delete[] Iparcat;
48      delete[] Icat;
49      delete[] Xincat;
50      delete[] Yincat;
51      delete[] Zincat;
52      delete[] Xoutcat;
53      delete[] Youtcat;
54      delete[] Zoutcat;
55      delete[] Erelcat;
56      delete[] Timecat;
57      delete[] Pathcat;
58      delete[] P0cat;
59      delete[] Iparcas;
60      delete[] Icas;
61      delete[] Xincas;
62      delete[] Yincas;
63      delete[] Zincas;
64      delete[] Xoutcas;
65      delete[] Youtcas;
66      delete[] Zoutcas;
67      delete[] Erelcas;
68      delete[] Timecas;
69      delete[] Pathcas;
70      delete[] P0cas;
71      delete[] Iparspe;
72      delete[] Itrpb;
73      delete[] Itrsl;
74      delete[] Itspa;
75      delete[] Xinspe;
76      delete[] Yinspe;
77      delete[] Zinspe;
78      delete[] Xoutspe;
79      delete[] Youtspe;
80      delete[] Zoutspe;
81      delete[] Xavspe;
82      delete[] Yavspe;
83      delete[] Zavspe;
84      delete[] Erelspe;
85      delete[] Pathspe;
86      delete[] P0spe;
87      delete[] Nxmult;
88      delete[] Nymult;
89      delete[] Npstripx;
90      delete[] Ntstripx;
91      delete[] Istripx;
92      delete[] Qstripx;
93      delete[] Xstripx;
94      delete[] Npstripy;
95      delete[] Ntstripy;
96      delete[] Istripy;
97      delete[] Qstripy;
98      delete[] Ystripy;
99      delete[] Icaplane;
100      delete[] Icastrip;
101      delete[] Icamod;
102      delete[] Enestrip;
103      delete[] Icapl;
104      delete[] Icasi;
105      delete[] Icast;
106      delete[] Xincal;
107      delete[] Yincal;
108      delete[] Zincal;
109      delete[] Erelcal;
110      delete[] Itubend;
111      delete[] Iparnd;
112      delete[] Xinnd;
113      delete[] Yinnd;
114      delete[] Zinnd;
115      delete[] Xoutnd;
116      delete[] Youtnd;
117      delete[] Zoutnd;
118      delete[] Erelnd;
119      delete[] Timend;
120      delete[] Pathnd;
121      delete[] P0nd;
122      delete[] Iparcard;
123      delete[] Icard;
124      delete[] Xincard;
125      delete[] Yincard;
126      delete[] Zincard;
127      delete[] Xoutcard;
128      delete[] Youtcard;
129      delete[] Zoutcard;
130      delete[] Erelcard;
131      delete[] Timecard;
132      delete[] Pathcard;
133      delete[] P0card;
134      */
135    }
136    
137    
138    void GPamela::SetBranchAddress(TChain* fhBookTree) {
139    
140      //    cout << "fhBookTree "<<fhBookTree << endl;
141      // prepare tree
142      fhBookTree->SetBranchAddress("Irun", &Irun);
143      fhBookTree->SetBranchAddress("Ievnt", &Ievnt);
144      fhBookTree->SetBranchAddress("Ipa", &Ipa);
145      fhBookTree->SetBranchAddress("X0", &X0);
146      fhBookTree->SetBranchAddress("Y0", &Y0);
147      fhBookTree->SetBranchAddress("Z0", &Z0);
148      fhBookTree->SetBranchAddress("Theta", &Theta);
149      fhBookTree->SetBranchAddress("Phi", &Phi);
150      fhBookTree->SetBranchAddress("P0", &P0);
151      fhBookTree->SetBranchAddress("Nthtof", &Nthtof);
152      fhBookTree->SetBranchAddress("Ipltof", Ipltof);
153      fhBookTree->SetBranchAddress("Ipaddle", Ipaddle);
154      fhBookTree->SetBranchAddress("Ipartof", Ipartof);
155      fhBookTree->SetBranchAddress("Xintof", Xintof);
156      fhBookTree->SetBranchAddress("Yintof", Yintof);
157      fhBookTree->SetBranchAddress("Zintof", Zintof);
158      fhBookTree->SetBranchAddress("Xouttof", Xouttof);
159      fhBookTree->SetBranchAddress("Youttof", Youttof);
160      fhBookTree->SetBranchAddress("Zouttof", Zouttof);
161      fhBookTree->SetBranchAddress("Ereltof", Ereltof);
162      fhBookTree->SetBranchAddress("Timetof", Timetof);
163      fhBookTree->SetBranchAddress("Pathtof", Pathtof);
164      fhBookTree->SetBranchAddress("P0tof", P0tof);
165      fhBookTree->SetBranchAddress("Nthcat", &Nthcat);
166      fhBookTree->SetBranchAddress("Iparcat", Iparcat);
167      fhBookTree->SetBranchAddress("Icat", Icat);
168      fhBookTree->SetBranchAddress("Xincat", Xincat);
169      fhBookTree->SetBranchAddress("Yincat", Yincat);
170      fhBookTree->SetBranchAddress("Zincat", Zincat);
171      fhBookTree->SetBranchAddress("Xoutcat", Xoutcat);
172      fhBookTree->SetBranchAddress("Youtcat", Youtcat);
173      fhBookTree->SetBranchAddress("Zoutcat", Zoutcat);
174      fhBookTree->SetBranchAddress("Erelcat", Erelcat);
175      fhBookTree->SetBranchAddress("Timecat", Timecat);
176      fhBookTree->SetBranchAddress("Pathcat", Pathcat);
177      fhBookTree->SetBranchAddress("P0cat", P0cat);
178      fhBookTree->SetBranchAddress("Nthcas", &Nthcas);
179      fhBookTree->SetBranchAddress("Iparcas", Iparcas);
180      fhBookTree->SetBranchAddress("Icas", Icas);
181      fhBookTree->SetBranchAddress("Xincas", Xincas);
182      fhBookTree->SetBranchAddress("Yincas", Yincas);
183      fhBookTree->SetBranchAddress("Zincas", Zincas);
184      fhBookTree->SetBranchAddress("Xoutcas", Xoutcas);
185      fhBookTree->SetBranchAddress("Youtcas", Youtcas);
186      fhBookTree->SetBranchAddress("Zoutcas", Zoutcas);
187      fhBookTree->SetBranchAddress("Erelcas", Erelcas);
188      fhBookTree->SetBranchAddress("Timecas", Timecas);
189      fhBookTree->SetBranchAddress("Pathcas", Pathcas);
190      fhBookTree->SetBranchAddress("P0cas", P0cas);
191      fhBookTree->SetBranchAddress("Nthspe", &Nthspe);
192      fhBookTree->SetBranchAddress("Iparspe", Iparspe);
193      fhBookTree->SetBranchAddress("Itrpb", Itrpb);
194      fhBookTree->SetBranchAddress("Itrsl", Itrsl);
195      fhBookTree->SetBranchAddress("Itspa", Itspa);
196      fhBookTree->SetBranchAddress("Xinspe", Xinspe);
197      fhBookTree->SetBranchAddress("Yinspe", Yinspe);
198      fhBookTree->SetBranchAddress("Zinspe", Zinspe);
199      fhBookTree->SetBranchAddress("Xoutspe", Xoutspe);
200      fhBookTree->SetBranchAddress("Youtspe", Youtspe);
201      fhBookTree->SetBranchAddress("Zoutspe", Zoutspe);
202      fhBookTree->SetBranchAddress("Xavspe", Xavspe);
203      fhBookTree->SetBranchAddress("Yavspe", Yavspe);
204      fhBookTree->SetBranchAddress("Zavspe", Zavspe);
205      fhBookTree->SetBranchAddress("Erelspe", Erelspe);
206      fhBookTree->SetBranchAddress("Pathspe", Pathspe);
207      fhBookTree->SetBranchAddress("P0spe", P0spe);
208      fhBookTree->SetBranchAddress("Nxmult", Nxmult);
209      fhBookTree->SetBranchAddress("Nymult", Nymult);
210      fhBookTree->SetBranchAddress("Nstrpx", &Nstrpx);
211      fhBookTree->SetBranchAddress("Npstripx", Npstripx);
212      fhBookTree->SetBranchAddress("Ntstripx", Ntstripx);
213      fhBookTree->SetBranchAddress("Istripx", Istripx);
214      fhBookTree->SetBranchAddress("Qstripx", Qstripx);
215      fhBookTree->SetBranchAddress("Xstripx", Xstripx);
216      fhBookTree->SetBranchAddress("Nstrpy", &Nstrpy);
217      fhBookTree->SetBranchAddress("Npstripy", Npstripy);
218      fhBookTree->SetBranchAddress("Ntstripy", Ntstripy);
219      fhBookTree->SetBranchAddress("Istripy", Istripy);
220      fhBookTree->SetBranchAddress("Qstripy", Qstripy);
221      fhBookTree->SetBranchAddress("Ystripy", Ystripy);
222      fhBookTree->SetBranchAddress("Nthcali", &Nthcali);
223      fhBookTree->SetBranchAddress("Icaplane", Icaplane);
224      fhBookTree->SetBranchAddress("Icastrip", Icastrip);
225      fhBookTree->SetBranchAddress("Icamod", Icamod);
226      fhBookTree->SetBranchAddress("Enestrip", Enestrip);
227      fhBookTree->SetBranchAddress("Nthcal", &Nthcal);
228      fhBookTree->SetBranchAddress("Icapl", Icapl);
229      fhBookTree->SetBranchAddress("Icasi", Icasi);
230      fhBookTree->SetBranchAddress("Icast", Icast);
231      fhBookTree->SetBranchAddress("Xincal", Xincal);
232      fhBookTree->SetBranchAddress("Yincal", Yincal);
233      fhBookTree->SetBranchAddress("Zincal", Zincal);
234      fhBookTree->SetBranchAddress("Erelcal", Erelcal);
235      fhBookTree->SetBranchAddress("Nthnd", &Nthnd);
236      fhBookTree->SetBranchAddress("Itubend", Itubend);
237      fhBookTree->SetBranchAddress("Iparnd", Iparnd);
238      fhBookTree->SetBranchAddress("Xinnd", Xinnd);
239      fhBookTree->SetBranchAddress("Yinnd", Yinnd);
240      fhBookTree->SetBranchAddress("Zinnd", Zinnd);
241      fhBookTree->SetBranchAddress("Xoutnd", Xoutnd);
242      fhBookTree->SetBranchAddress("Youtnd", Youtnd);
243      fhBookTree->SetBranchAddress("Zoutnd", Zoutnd);
244      fhBookTree->SetBranchAddress("Erelnd", Erelnd);
245      fhBookTree->SetBranchAddress("Timend", Timend);
246      fhBookTree->SetBranchAddress("Pathnd", Pathnd);
247      fhBookTree->SetBranchAddress("P0nd", P0nd);
248      fhBookTree->SetBranchAddress("Nthcard", &Nthcard);
249      fhBookTree->SetBranchAddress("Iparcard", Iparcard);
250      fhBookTree->SetBranchAddress("Icard", Icard);
251      fhBookTree->SetBranchAddress("Xincard", Xincard);
252      fhBookTree->SetBranchAddress("Yincard", Yincard);
253      fhBookTree->SetBranchAddress("Zincard", Zincard);
254      fhBookTree->SetBranchAddress("Xoutcard", Xoutcard);
255      fhBookTree->SetBranchAddress("Youtcard", Youtcard);
256      fhBookTree->SetBranchAddress("Zoutcard", Zoutcard);
257      fhBookTree->SetBranchAddress("Erelcard", Erelcard);
258      fhBookTree->SetBranchAddress("Timecard", Timecard);
259      fhBookTree->SetBranchAddress("Pathcard", Pathcard);
260      fhBookTree->SetBranchAddress("P0card", P0card);
261    
262      //    fhBookTree->SetBranchStatus("*",0);
263    
264    }
265    
266    ClassImp( GPamela);
267    
268    /////////////////////////////////////////////////////////////////////////////
269    /////////////////////////////////////////////////////////////////////////////
270    /////////////////////////////////////////////////////////////////////////////
271    /////////////////////////////////////////////////////////////////////////////
272  //--------------------------------------  //--------------------------------------
273  //  //
274  //  //
275  //--------------------------------------  //--------------------------------------
276  /**  /**
277   * Default constructor   * Default constructor
278   */   */
279  PamTrack::PamTrack(){  PamTrack::PamTrack() {
280      trk_track  = 0;    trk_track = 0;
281      calo_track = 0;    trk_ext_track = 0;
282      tof_track  = 0;    calo_track = 0;
283      candeleteobj = 0;    tof_track = 0;
284  };    orb_track = 0;
285      candeleteobj = 0;
286      pscore = 0;
287      iscore = 0;
288    }
289    ;
290  //--------------------------------------  //--------------------------------------
291  //  //
292  //  //
293  //--------------------------------------  //--------------------------------------
294  /**  /**
295   * Constructor   * Constructor
296   */   */
297  PamTrack::PamTrack(TrkTrack* t, CaloTrkVar* c, ToFTrkVar* o){  PamTrack::PamTrack(TrkTrack* t, CaloTrkVar* c, ToFTrkVar* o, OrbitalInfoTrkVar *r) {
298    
299      trk_track  = 0;    trk_ext_track = 0;
300      calo_track = 0;    trk_track = 0;
301      tof_track  = 0;    calo_track = 0;
302  //     if(t)trk_track  = new TrkTrack(*t);    tof_track = 0;
303  //     if(c)calo_track = new CaloTrkVar(*c);    orb_track = 0;
304  //     if(o)tof_track  = new ToFTrkVar(*o);    //     if(t)trk_track  = new TrkTrack(*t);
305      if(t)trk_track  = t;    //     if(c)calo_track = new CaloTrkVar(*c);
306      if(c)calo_track = c;    //     if(o)tof_track  = new ToFTrkVar(*o);
307      if(o)tof_track  = o;  //   if (t)
308      candeleteobj = 0;  //     trk_track = t;
309    //   if (c)
310    //     calo_track = c;
311    //   if (o)
312    //     tof_track = o;
313    //   if (r)
314    //     orb_track = r;
315    
316    //   candeleteobj = 0;
317    
318    
319      if (t){
320          trk_track = new TrkTrack(*t);
321          trk_ext_track = new ExtTrack(*t);//NB!! ha dimensione 6 invece che 8
322      }
323      if (c)
324        calo_track = new CaloTrkVar(*c);
325      if (o)
326        tof_track = new ToFTrkVar(*o);
327      if (r)
328        orb_track = new OrbitalInfoTrkVar(*r);
329      candeleteobj = 1;
330    
331  };  }
332  PamTrack::PamTrack(const PamTrack& track){  ;
333    /**
334     * Constructor
335     */
336    PamTrack::PamTrack(ExtTrack* t, CaloTrkVar* c, ToFTrkVar* o, OrbitalInfoTrkVar *r) {
337    
338      TrkTrack   *t = track.trk_track;    trk_ext_track = 0;
339      CaloTrkVar *c = track.calo_track;    trk_track = 0;
340      ToFTrkVar  *o = track.tof_track;    calo_track = 0;
341      tof_track = 0;
342      orb_track = 0;
343      //     if(t)trk_track  = new TrkTrack(*t);
344      //     if(c)calo_track = new CaloTrkVar(*c);
345      //     if(o)tof_track  = new ToFTrkVar(*o);
346    //   if (t)
347    //     trk_track = t;
348    //   if (c)
349    //     calo_track = c;
350    //   if (o)
351    //     tof_track = o;
352    //   if (r)
353    //     orb_track = r;
354    
355    //   candeleteobj = 0;
356    
357    
358      if (t){
359    ////      trk_track = new TrkTrack(*t);//in this case TrkTrack object remains null
360          trk_ext_track = new ExtTrack(*t);
361      }
362      if (c)
363        calo_track = new CaloTrkVar(*c);
364      if (o)
365        tof_track = new ToFTrkVar(*o);
366      if (r)
367        orb_track = new OrbitalInfoTrkVar(*r);
368      candeleteobj = 1;
369      pscore = 0;
370      iscore = 0;
371    
     trk_track  = 0;  
     calo_track = 0;  
     tof_track  = 0;  
     if(t)trk_track  = new TrkTrack(*t);  
     if(c)calo_track = new CaloTrkVar(*c);  
     if(o)tof_track  = new ToFTrkVar(*o);  
     candeleteobj = 1;  
       
372  }  }
373  void PamTrack::Clear(){  ;
374    PamTrack::PamTrack(const PamTrack& track) {
375    
376  //    cout << "PamTrack::Clear() "<<candeleteobj<<endl;    TrkTrack *t = track.trk_track;
377      if(candeleteobj){    ExtTrack *e = track.trk_ext_track;
378          if(trk_track)  trk_track->TrkTrack::Clear();    CaloTrkVar *c = track.calo_track;
379          if(calo_track) calo_track->CaloTrkVar::Clear();//???    ToFTrkVar *o = track.tof_track;
380          if(tof_track)  tof_track->ToFTrkVar::Clear();//???    OrbitalInfoTrkVar *r = track.orb_track;
381      }else{  
382          trk_track  = 0;    trk_ext_track = 0;
383          calo_track = 0;    trk_track     = 0;
384          tof_track  = 0;    calo_track    = 0;
385      }    tof_track     = 0;
386  }    orb_track     = 0;
387  void PamTrack::Delete(){    if(e)
388  //    cout << "PamTrack::Delete() "<<candeleteobj<<endl;        trk_ext_track = new ExtTrack(*e);
389      if(candeleteobj){    if (t)
390          if(trk_track)  {      trk_track = new TrkTrack(*t);
391              trk_track->TrkTrack::Clear();    if (c)
392              delete trk_track;      calo_track = new CaloTrkVar(*c);
393          }    if (o)
394          if(calo_track){      tof_track = new ToFTrkVar(*o);
395              calo_track->CaloTrkVar::Clear();//???    if (r)
396              delete calo_track;      orb_track = new OrbitalInfoTrkVar(*r);
397          }  
398          if(tof_track){    candeleteobj = 1;
399              tof_track->ToFTrkVar::Clear();//???    pscore = 0;
400              delete tof_track;    iscore = 0;
401          }  
402      }else{  }
403          Clear();  void PamTrack::Clear(Option_t *option) {
404    
405    //    cout << "PamTrack::Clear( "<<option<<" ) "<<candeleteobj<<endl;
406      if (candeleteobj) {
407          
408        if (trk_ext_track)
409          trk_ext_track->ExtTrack::Clear(option);
410        if (trk_track)
411          trk_track->TrkTrack::Clear();
412        if (calo_track)
413          calo_track->CaloTrkVar::Clear();//???
414        if (tof_track)
415          tof_track->ToFTrkVar::Clear();//???
416        if (orb_track)
417          orb_track->OrbitalInfoTrkVar::Clear();//???
418      }
419      else {
420        trk_ext_track = 0;
421        trk_track = 0;
422        calo_track = 0;
423        tof_track = 0;
424        orb_track = 0;
425      }
426      pscore = 0;
427      iscore = 0;
428    
429    }
430    void PamTrack::Delete() {
431      //    cout << "PamTrack::Delete() "<<candeleteobj<<endl;
432      if (candeleteobj) {
433        if (trk_ext_track) {
434          trk_ext_track->ExtTrack::Clear("C");
435          delete trk_ext_track;
436      }      }
437        if (trk_track) {
438          trk_track->TrkTrack::Clear();
439          delete trk_track;
440        }
441        if (calo_track) {
442          calo_track->CaloTrkVar::Clear();//???
443          delete calo_track;
444        }
445        if (tof_track) {
446          tof_track->ToFTrkVar::Clear();//???
447          delete tof_track;
448        }
449        if (orb_track) {
450          orb_track->OrbitalInfoTrkVar::Clear();//???
451          delete orb_track;
452        }
453      }
454      else {
455        Clear();
456      }
457  }  }
458    
459    
460    
461    
462  //--------------------------------------  //--------------------------------------
463  //  //
464  //  //
465  //--------------------------------------  //--------------------------------------
466  /**  /**
467   * Constructor   * Default Constructor
468   */   */
469  PamLevel2::PamLevel2(){  PamLevel2::PamLevel2() {
470              Initialize();
471  //     trk2_obj  = TrkLevel2::GetTrkLevel2();  }
 //     trk1_obj  = TrkLevel1::GetTrkLevel1();  
 //     trkh_obj  = TrkHough::GetTrkHough();  
 //     calo1_obj = CaloLevel1::GetCaloLevel1();  
 //     calo2_obj = CaloLevel2::GetCaloLevel2();  
 //     tof_obj   = ToFLevel2::GetToFLevel2();  
 //     trig_obj  = TrigLevel2::GetTrigLevel2();  
 //     s4_obj    = S4Level2::GetS4Level2();  
 //     nd_obj    = NDLevel2::GetNDLevel2();  
 //     ac_obj    = AcLevel2::GetAcLevel2();  
 //     orb_obj   = OrbitalInfo::GetOrbitalInfo();  
       
     h0_obj    = 0;  
     trk0_obj  = 0;  
     calo0_obj  = 0;  
   
     trk2_obj  = 0;  
     trk1_obj  = 0;  
     trkh_obj  = 0;  
     calo1_obj = 0;  
     calo2_obj = 0;  
     tof_obj   = 0;  
     trig_obj  = 0;  
     s4_obj    = 0;  
     nd_obj    = 0;  
     ac_obj    = 0;  
     orb_obj   = 0;  
   
     run_obj   = 0;//new GL_RUN();  
     soft_obj   = 0;// Emiliano  
     irun = -1;  
     runfirstentry = 0ULL;  
     runlastentry = 0ULL;  
   
     l0_file = NULL;  
     l0_tree = NULL;  
     iroot   = -1;  
     dbc     = 0;  
472    
     prevshift = 0;  
       
     irun = -1;  
     run_tree = NULL;  
     run_tree_clone = NULL;  
     sel_tree = NULL;  
     sel_tree_clone = NULL;  
       
     irunentry = -1;  
     pam_tree = NULL;  
     for(Int_t i=0; i<NCLONES; i++ )pam_tree_clone[i]=NULL;  
   
     host = "mysql://localhost/pamelaprod";  
     user = "anonymous";  
     psw = "";  
     const char *pamdbhost=gSystem->Getenv("PAM_DBHOST");  
     const char *pamdbuser=gSystem->Getenv("PAM_DBUSER");  
     const char *pamdbpsw=gSystem->Getenv("PAM_DBPSW");  
     if ( !pamdbhost ) pamdbhost = "";  
     if ( !pamdbuser ) pamdbuser = "";  
     if ( !pamdbpsw ) pamdbpsw = "";  
     if ( strcmp(pamdbhost,"") ) host = pamdbhost;  
     if ( strcmp(pamdbuser,"") ) user = pamdbuser;  
     if ( strcmp(pamdbpsw,"") ) psw = pamdbpsw;  
473    
474        /**
475     * Constructor
476     * @param ddir Name of directory where level2 files are stored.
477     * @param list Name of an ascii file containing the list of file names
478     * @param detlist Options to chose what to load.
479     * Possible options are:
480     *       +AUTO --> load all trees/branches in the input files
481     *       +(-)ALL --> inlcude(exclude) all trees/branches
482     *       +(-)TRK1+(-)TRK2+(-)CAL1+(-)CAL2+(-)TOF+(-)TRG+(-)ND+(-)S4+(-)ORB+(-)AC --> inlcude(exclude) trees and branches
483     *       +(-)TRK0 --> include(exclude) tracker level0 tree
484     *       +(-)GP --> include exclude GPAMELA output tree
485     * If no options are specified, the default is assumed. Default is:
486     * +TRK2+CAL2+CAL1+TOF+TRG+ND+AC+S4+ORB
487     */
488    PamLevel2::PamLevel2(TString ddir, TString llist, TString detlist) {
489      Initialize();
490      TList* listf = GetListOfLevel2Files(ddir, llist);
491      if (listf)
492        GetPamTree(listf, detlist);
493      if (listf)
494        GetRunTree(listf);
495      SetMaxShift(-1);
496    }
497    
 //    sorted_tracks = 0;//new TRefArray();  
       
     CAL0 = false;  
     CAL1 = true;  
     CAL2 = true;  
     TRK2 = true;  
     TRK1 = false;  
     TRKh = false;  
     TRKh = false;  
     TRG  = true;  
     TOF  = true;  
     TOF0 = false;  
     S4   = true;  
     ND   = true;  
     AC   = true;  
     ORB  = true;  
       
     RUN  = true;  
498    
499      SELLI = -1;  PamLevel2::PamLevel2(TString ddir, TList *llist, TString detlist) {
500      Initialize();
501      GetPamTree(llist, detlist);
502      GetRunTree(llist);
503      SetMaxShift(-1);
504    }
505    
506    /**
507     * Constructor
508     * @param ddir Name of directory where level2 files are stored.
509     * @param list Name of an ascii file containing the list of file names
510     * Default trees/branches are loaded. Default is:
511     * +TRK2+CAL2+CAL1+TOF+TRG+ND+AC+S4+ORB
512     */
513    PamLevel2::PamLevel2(TString ddir, TString llist) {
514      Initialize();
515      TList* listf = GetListOfLevel2Files(ddir, llist);
516      cout << "GetPamTree: "<<endl;
517      GetPamTree(listf, "");
518      cout << "GetRunTree: "<<endl;
519      GetRunTree(listf);
520      SetMaxShift(-1);
521    }
522    
     tsorted=0;  
     timage=0;  
523    
524  };  void PamLevel2::Initialize() {
525    
526      h0_obj = 0;
527      trk0_obj = 0;
528      calo0_obj = 0;
529    
530      trk2_obj = 0;
531      trk1_obj = 0;
532      trkh_obj = 0;
533      calo1_obj = 0;
534      calo2_obj = 0;
535      tof2_obj = 0;
536      trig_obj = 0;
537      s4_obj = 0;
538      nd_obj = 0;
539      ac_obj = 0;
540      orb2_obj = 0;
541      gp_obj = 0;
542    
543      extAlgFlag=0;
544    
545      trk_ext_obj     = 0;
546      trk_ext_nuc_obj = 0;
547      trk_nuc_obj     = 0;
548      
549      calo_ext_obj     = 0;
550      calo_ext_nuc_obj = 0;
551      calo_nuc_obj     = 0;
552      
553      tof_ext_obj     = 0;
554      tof_ext_nuc_obj = 0;
555      tof_nuc_obj     = 0;
556      
557      orb_ext_obj     = 0;
558      orb_ext_nuc_obj = 0;
559      orb_nuc_obj     = 0;
560    
561      trk2_nuc_obj  = 0;
562      calo2_nuc_obj = 0;
563      tof2_nuc_obj  = 0;
564      orb2_nuc_obj  = 0;
565    
566    
567      run_obj = 0;//new GL_RUN();
568      soft_obj = 0;// Emiliano
569      proc_obj = 0;// Emiliano
570      irun = -1LL;
571      irunt = -1LL;
572      totrunentry = 0LL;
573      totrunentrymax = 0LL;
574      totrunentrymin = 0LL;
575      runfirstentry = 0LL;
576      runlastentry = 0LL;
577      gltsync = 0; // Emiliano
578      fUpdateRunInfo = true; // Emiliano
579      fUseDBinRunInfo = true; // Emiliano
580      fDiscarded = false; //EM
581      isSync = false; // by default assume that the level2 file(s) is(are) not sinchronized between L0/DB and L2, that is we miss some packets in L2 due to nested/DV-skipped events
582      il0entry = 0LL;
583      //  hasL0EE = true;
584    
585      l0_file = NULL;
586      l0_tree = NULL;
587      iroot = -1;
588      dbc = 0;
589    
590      prevshift = 0;
591      yprevshift = 0;
592      maxshift = 10; //EMILIANO now overridden by SetMaxShift(-1) called by constructors
593    
594      run_tree = NULL;
595      run_tree_clone = NULL;
596    
597      proc_tree = NULL;
598      proc_tree_clone = NULL;
599    
600      sel_tree = NULL;
601      sel_tree_clone = NULL;
602    
603      irunentry = -1LL;
604      pam_tree = NULL;
605      for (Int_t i = 0; i < NCLONES; i++)
606        pam_tree_clone[i] = NULL;
607    
608      totdltime[0] = 0LL;
609      totdltime[1] = 0LL;
610      totdltime[2] = 0LL;
611    
612      host = "mysql://localhost/pamelaprod";
613      user = "anonymous";
614      psw = "";
615      const char *pamdbhost = gSystem->Getenv("PAM_DBHOST");
616      const char *pamdbuser = gSystem->Getenv("PAM_DBUSER");
617      const char *pamdbpsw = gSystem->Getenv("PAM_DBPSW");
618      if (!pamdbhost)
619        pamdbhost = "";
620      if (!pamdbuser)
621        pamdbuser = "";
622      if (!pamdbpsw)
623        pamdbpsw = "";
624      if (strcmp(pamdbhost, ""))
625        host = pamdbhost;
626      if (strcmp(pamdbuser, ""))
627        user = pamdbuser;
628      if (strcmp(pamdbpsw, ""))
629        psw = pamdbpsw;
630    
631      customString = "";
632    
633      //    sorted_tracks = 0;//new TRefArray();
634    
635      CAL0 = false;
636      CAL1 = true;
637      CAL2 = true;
638      TRK2 = true;
639      TRK1 = false;
640      TRK0 = false;
641      TRKh = false;
642      TRG = true;
643      TOF = true;
644      TOF0 = false;
645      S4 = true;
646      ND = true;
647      AC = true;
648      ORB = true;
649      PROC = true;
650      GP = false;
651    
652      EXT = false;
653      NUC = false;
654      trkAlg = "STD";//default tracking algorythm
655    
656      RUN = true;
657    
658      SELLI = -1;
659    
660      ISGP = false;
661    
662      DBG = false;
663    
664      tsorted = 0;
665      timage = 0;
666      text = 0 ;
667    
668      tsorted_nuc = 0;
669      timage_nuc = 0;
670      text_nuc = 0 ;
671    
672      howtosort = "+CAL+TOF";
673      //howtosort = "+TOF";
674      sortthr = 100.;
675    
676      issorted = false;
677      lastsorted = -1;
678      issorted_new = false;
679      lastsorted_new = -1;
680    
681    }
682    ;
683  /**  /**
684   * Delete the event (act as Dtor)   * Delete the event (act as Dtor)
685   */   */
686  void PamLevel2::Delete(){  void PamLevel2::Delete() {
           
     if(run_obj)delete run_obj;  
     if(soft_obj)delete soft_obj; //Emiliano  
687    
688  //    cout << "void PamLevel2::Clear()"<<endl;    if (run_obj)
689      if(h0_obj)   delete h0_obj;      delete run_obj;
690      if(trk0_obj) delete trk0_obj;          if (soft_obj)
691      if(calo0_obj) delete calo0_obj;          delete soft_obj; //Emiliano
692      if(trk1_obj) delete trk1_obj;          if (proc_obj)
693      if(trk2_obj) delete trk2_obj;      delete proc_obj; //Emiliano
694      if(trkh_obj) delete trkh_obj;  
695      if(calo1_obj)delete calo1_obj;    //    cout << "void PamLevel2::Clear()"<<endl;
696      if(calo2_obj)delete calo2_obj;    if (h0_obj)
697      if(tof_obj)  delete tof_obj;      delete h0_obj;
698      if(trig_obj) delete trig_obj;    if (trk0_obj)
699      if(s4_obj)   delete s4_obj;      delete trk0_obj;
700      if(nd_obj)   delete nd_obj;    if (calo0_obj)
701      if(ac_obj)   delete ac_obj;      delete calo0_obj;
702      if(orb_obj)  delete orb_obj;    if (trk1_obj)
703            delete trk1_obj;
704      if(tsorted){    if (trk2_obj)
705          tsorted->Delete();      delete trk2_obj;
706          delete tsorted;    if (trkh_obj)
707      }      delete trkh_obj;
708      if(timage){    if (calo1_obj)
709          timage->Delete();      delete calo1_obj;
710          delete timage;    if (calo2_obj)
711      }      delete calo2_obj;
712      if (tof2_obj)
713        delete tof2_obj;
714      if (trig_obj)
715        delete trig_obj;
716      if (s4_obj)
717        delete s4_obj;
718      if (nd_obj)
719        delete nd_obj;
720      if (ac_obj)
721        delete ac_obj;
722      if (orb2_obj)
723        delete orb2_obj;
724      if (gp_obj)
725        delete gp_obj;
726    
727      if(trk_nuc_obj)trk_nuc_obj->Delete();
728      if(trk_ext_obj)trk_ext_obj->Delete();
729      if(trk_ext_nuc_obj)trk_ext_nuc_obj->Delete();
730    
731      if(calo_nuc_obj)calo_nuc_obj->Delete();
732      if(calo_ext_obj)calo_ext_obj->Delete();
733      if(calo_ext_nuc_obj)calo_ext_nuc_obj->Delete();
734    
735      if(tof_nuc_obj)tof_nuc_obj->Delete();
736      if(tof_ext_obj)tof_ext_obj->Delete();
737      if(tof_ext_nuc_obj)tof_ext_nuc_obj->Delete();
738    
739      if(orb_nuc_obj)orb_nuc_obj->Delete();
740      if(orb_ext_obj)orb_ext_obj->Delete();
741      if(orb_ext_nuc_obj)orb_ext_nuc_obj->Delete();
742    
743    
744      if(trk2_nuc_obj)trk2_nuc_obj->Delete();;
745      if( calo2_nuc_obj)calo2_nuc_obj->Delete();;
746      if(tof2_nuc_obj)tof2_nuc_obj->Delete();;
747      if(orb2_nuc_obj)orb2_nuc_obj->Delete();;
748      
749    
     if(dbc){  
         dbc->Close();  
         delete dbc;  
     }  
       
     if(l0_file)l0_file->Close();  
     if(pam_tree)pam_tree->Delete();;  
     if(run_tree)run_tree->Delete();;  
     if(sel_tree)sel_tree->Delete();;  
     for(Int_t i=0; i<NCLONES; i++ )if(pam_tree_clone[i])pam_tree_clone[i]->Delete();;  
     if(run_tree_clone)run_tree_clone->Delete();;  
     if(sel_tree_clone)sel_tree_clone->Delete();;  
       
750    
751  };    if (tsorted) {
752        tsorted->Delete();
753        delete tsorted;
754      }
755      if (timage) {
756        timage->Delete();
757        delete timage;
758      }
759      if (text) {
760        text->Delete();
761        delete text;
762      }
763      if (tsorted_nuc) {
764        tsorted_nuc->Delete();
765        delete tsorted_nuc;
766      }
767      if (timage_nuc) {
768        timage_nuc->Delete();
769        delete timage_nuc;
770      }
771      if (text_nuc) {
772        text_nuc->Delete();
773        delete text_nuc;
774      }
775    
776    
777    
778      if (dbc) {
779        dbc->Close();
780        delete dbc;
781        dbc=0;
782      }
783    
784      if (gltsync)
785        delete gltsync;
786    
787      if (l0_file)
788        l0_file->Close();
789      //    if(pam_tree)pam_tree->Delete();;
790    
791      if (pam_tree) {
792        //
793        // we have first to find which chains we have to delete, then delete the main chain and only after delete the friend chains. Any other order causes a segfault...
794        //
795        TList *temp = pam_tree->GetListOfFriends();
796        TList *contents = new TList; // create chain friend list
797        contents->SetOwner();
798        TIter next(temp);
799        TChain *questo = 0;
800        while ((questo = (TChain*) next())) {
801          TString name = questo->GetName();
802          contents->Add((TChain*) gROOT->FindObject(name.Data()));// add object to the list
803        };
804        //
805        // deleting the main chain
806        //
807        pam_tree->Delete();
808        //
809        // deleting the friends...
810        //
811        TIter next2(contents);
812        TChain *questa = 0;
813        while ( (questa = (TChain*)next2()) ) {
814          TString name = questa->GetName();
815          questa->Delete();
816          questa = NULL;
817        };
818        //
819      };
820      pam_tree = NULL;
821    
822      if (run_tree)
823        run_tree->Delete();;
824      if (sel_tree)
825        sel_tree->Delete();;
826    
827      // The following lines are commented out since they may generate a double delete error
828      // if the file containing the clone trees is closed. This is because the file owns the
829      // clone trees which are written into it, so it will delete them when it is closed; if
830      // also PamLevel2 will try to delete these trees, a double delete error will be generated
831      // when exiting from analysis program. (Nicola 28/11/2011)
832    
833      /*for (Int_t i = 0; i < NCLONES; i++)
834        if (pam_tree_clone[i])
835          pam_tree_clone[i]->Delete();;
836      if (run_tree_clone)
837        run_tree_clone->Delete();;
838      if (sel_tree_clone)
839        sel_tree_clone->Delete();;*/
840    
841      if (irunoffset)
842        delete[] irunoffset;
843    
844    
845      Initialize();
846    
847    }
848    ;
849    
850  /**  /**
851   * Clear the event (NB! does not deallocate objects)   * Clear the event (NB! does not deallocate objects)
852   */   */
853  void PamLevel2::Clear(){  void PamLevel2::Clear() {
           
 //    cout << "void PamLevel2::Clear()"<<endl;  
854    
855      //    cout << "void PamLevel2::Clear()"<<endl;
856    
857      //
858      // This method is called once for every entry but RunInfo and SoftInfo do not change until the next run so we cannot clear them here unless we don't
859      // want to load them for each event even if they are the same...
860      //
861      //    if(run_obj)delete run_obj;
862      //    if(run_obj) run_obj->Clear();  // Emiliano: Do not deallocate run_obj here, it will give segmentation fault! call clear instead
863      //    if(soft_obj) soft_obj->Clear();
864    
865      if (h0_obj)
866        h0_obj->Clear();
867      //    if(trk0_obj) trk0_obj->Clear();
868      if (trk1_obj)
869        trk1_obj->Clear();
870      if (trk2_obj)
871        trk2_obj->Clear();
872      if (trkh_obj)
873        trkh_obj->Clear();
874      if (calo0_obj)
875        calo0_obj->Clear();
876      if (calo1_obj)
877        calo1_obj->Clear();
878      if (calo2_obj)
879        calo2_obj->Clear();
880      if (tof2_obj)
881        tof2_obj->Clear();
882      if (trig_obj)
883        trig_obj->Clear();
884      if (s4_obj)
885        s4_obj->Clear();
886      if (nd_obj)
887        nd_obj->Clear();
888      if (ac_obj)
889        ac_obj->Clear();
890      if (orb2_obj)
891        orb2_obj->Clear();
892      if (gp_obj)
893        gp_obj->Clear();
894      if (proc_obj)
895        proc_obj->Clear();
896    
897      //    if(sorted_tracks)sorted_tracks->Clear();
898      //    sorted_tracks.Clear();
899    
900      if(trk_nuc_obj)trk_nuc_obj->Clear();
901      if(trk_ext_obj)trk_ext_obj->Clear();
902      if(trk_ext_nuc_obj)trk_ext_nuc_obj->Clear();
903    
904      if(calo_nuc_obj)calo_nuc_obj->Clear();
905      if(calo_ext_obj)calo_ext_obj->Clear();
906      if(calo_ext_nuc_obj)calo_ext_nuc_obj->Clear();
907    
908      if(tof_nuc_obj)tof_nuc_obj->Clear();
909      if(tof_ext_obj)tof_ext_obj->Clear();
910      if(tof_ext_nuc_obj)tof_ext_nuc_obj->Clear();
911    
912      if(orb_nuc_obj)orb_nuc_obj->Clear();
913      if(orb_ext_obj)orb_ext_obj->Clear();
914      if(orb_ext_nuc_obj)orb_ext_nuc_obj->Clear();
915    
916      if(trk2_nuc_obj)trk2_nuc_obj->Clear();;
917      if( calo2_nuc_obj)calo2_nuc_obj->Clear();;
918      if(tof2_nuc_obj)tof2_nuc_obj->Clear();;
919      if(orb2_nuc_obj)orb2_nuc_obj->Clear();;
920    
921      if (tsorted)tsorted->Delete();
922      if (timage)timage->Delete();
923      if (text) text->Delete();
924    
925      if (tsorted_nuc)tsorted_nuc->Delete();
926      if (timage_nuc)timage_nuc->Delete();
927      if (text_nuc) text_nuc->Delete();
928    }
929    ;
930    
931    void PamLevel2::Reset() {
932      //
933      // First of all clear everything
934      //
935      Clear();
936      //
937      // close and reset chains and pointers
938      //
939      if (pam_tree) {
940        //
941        // we have first to find which chains we have to delete, then delete the main chain and only after delete the friend chains. Any other order causes a segfault...
942        //
943        TList *temp = pam_tree->GetListOfFriends();
944        TList *contents = new TList; // create chain friend list
945        contents->SetOwner();
946        TIter next(temp);
947        TChain *questo = 0;
948        while ((questo = (TChain*) next())) {
949          TString name = questo->GetName();
950          contents->Add((TChain*) gROOT->FindObject(name.Data()));// add object to the list
951        };
952        //
953        // deleting the main chain
954        //
955        pam_tree->Delete();
956        //
957        // deleting the friends...
958        //
959        TIter next2(contents);
960        TChain *questa = 0;
961        while ( (questa = (TChain*) next2()) ) {
962          TString name = questa->GetName();
963          questa->Delete();
964          questa = NULL;
965        };
966        //
967      };
968      pam_tree = NULL;
969      //
970      if (run_tree)
971        run_tree->Delete();;
972      run_tree = NULL;
973      if (sel_tree)
974        sel_tree->Delete();;
975      sel_tree = NULL;
976    
977      if (proc_tree)
978        proc_tree->Delete();
979      proc_tree = NULL;
980      //
981      // Close file
982      //
983      if (l0_file)
984        l0_file->Close("R");
985      l0_file = NULL;
986      //
987      h0_obj = 0;
988      trk0_obj = 0;
989      calo0_obj = 0;
990      //
991      trk2_obj = 0;
992      trk1_obj = 0;
993      trkh_obj = 0;
994      calo1_obj = 0;
995      calo2_obj = 0;
996      tof2_obj = 0;
997      trig_obj = 0;
998      s4_obj = 0;
999      nd_obj = 0;
1000      ac_obj = 0;
1001      orb2_obj = 0;
1002      gp_obj = 0;
1003      proc_obj = 0;
1004    
1005      trk_ext_obj     = 0;
1006      trk_ext_nuc_obj = 0;
1007      trk_nuc_obj     = 0;
1008      
1009      calo_ext_obj     = 0;
1010      calo_ext_nuc_obj = 0;
1011      calo_nuc_obj     = 0;
1012      
1013      tof_ext_obj     = 0;
1014      tof_ext_nuc_obj = 0;
1015      tof_nuc_obj     = 0;
1016      
1017      orb_ext_obj     = 0;
1018      orb_ext_nuc_obj = 0;
1019      orb_nuc_obj     = 0;
1020    
1021      trk2_nuc_obj  = 0;
1022      calo2_nuc_obj = 0;
1023      tof2_nuc_obj  = 0;
1024      orb2_nuc_obj  = 0;
1025    
1026      trk2_nuc_obj  = 0;
1027      calo2_nuc_obj = 0;
1028      tof2_nuc_obj  = 0;
1029      orb2_nuc_obj  = 0;
1030      //
1031      // Reset run pointers
1032      //
1033      run_obj = 0;//new GL_RUN();
1034      soft_obj = 0;// Emiliano
1035      proc_obj = 0;// Emiliano
1036      irun = -1;
1037      irunt = -1;
1038      totrunentry = 0LL;
1039      totrunentrymax = 0LL;
1040      totrunentrymin = 0LL;
1041      runfirstentry = 0ULL;
1042      runlastentry = 0ULL;
1043      prevabstime = 0ULL;
1044      prevpktnum = 0;
1045      abstime = 0ULL;
1046      pktnum = 0;
1047      isFragment = false;
1048      //
1049      totdltime[0] = 0LL;
1050      totdltime[1] = 0LL;
1051      totdltime[2] = 0LL;
1052      //
1053    }
1054    ;
1055    
1056    Bool_t PamLevel2::IsGood(Bool_t strict) {
1057      Bool_t goodev = true;
1058      //
1059      if (calo2_obj && !calo2_obj->IsGood(strict))
1060        goodev = false;
1061      //
1062      if (strict) {
1063        if (trk2_obj && trk2_obj->UnpackError() != 0)
1064          goodev = false;
1065        if (tof2_obj && tof2_obj->unpackError != 0)
1066          goodev = false;
1067        if (trig_obj && trig_obj->unpackError != 0)
1068          goodev = false;
1069        if (s4_obj && s4_obj->unpackError != 0)
1070          goodev = false;
1071        if (nd_obj && nd_obj->unpackError != 0)
1072          goodev = false;
1073        if (ac_obj && (ac_obj->unpackError != 0 || ((ac_obj->status[0] >> 2) & 1) || ((ac_obj->status[1] >> 2) & 1)))
1074          goodev = false;
1075        //  if(orb2_obj)
1076      }
1077      else {
1078        if (nd_obj && nd_obj->unpackError != 0)
1079          goodev = false;
1080        if (ac_obj && (ac_obj->unpackError != 0 || ((ac_obj->status[0] >> 2) & 1) || ((ac_obj->status[1] >> 2) & 1)))
1081          goodev = false;
1082      };
1083      return (goodev);
1084    }
1085    ;
1086    
1087    void PamLevel2::SkipRunInfoUpdate(){
1088      printf("\n\n ******** WARNING ******** \n Skip DB connections, DO NOT USE PamLevel2::GetRunInfo() method! \n\n");
1089      fUpdateRunInfo = false;
1090      this->SetSELLI(2);
1091      printf(" ===============> W A R N I N G <================ \n");
1092      printf(" in case PamLevel2::CreateCloneTrees() will be called \n");
1093      printf(" it will be reverted to PadmeAmidala level2 structure , i.e. NO SELECTIONLIST WILL BE CREATED IN THE NEW LEVEL2 FILE! \n\n");
1094      if ( run_tree_clone ){
1095        printf(" ===============> W A R N I N G <================ \n");
1096        printf(" PamLevel2::SkipRunIndoUpdate or PamLevel2::NoDBconnections() has been called together with PamLevel2::CreateCloneTrees() \n");
1097        printf(" TO AVOID CRASHES call PamLevel2::CreateCloneTrees() after PamLevel2::SkipRunIndoUpdate or PamLevel2::NoDBconnections() \n");    
1098      };
1099    }
1100    
1101    void PamLevel2::SetMaxShift(Int_t sh){
1102      if ( sh >=  0 ){
1103        printf("PamLevel2::SetMaxShift(Int_t) --WARNING-- the default is optimized by checking the level2 file\n it is strongly suggested to let PamLevel2 choose the max shift!\n");
1104        maxshift = sh;
1105      } else {
1106        ULong64_t nev = GetEntries();
1107        ULong64_t runnev = 0ULL;
1108        for (Int_t r=0; r< run_tree->GetEntries();r++){
1109          run_tree->GetEntry(r);//update runinfo
1110          runnev += GetRunInfo()->NEVENTS;
1111        }
1112        maxshift = (Int_t)(runnev-nev) + 10; // +10 just to be conservative
1113        if ( (runnev-nev) == 0 ) isSync = true;
1114        if (DBG) printf("PamLevel2::SetMaxShift(Int_t_) - sh negative %i - nev is %lld runnnev is %lld so maxshift set to %i \n",sh,nev,runnev,maxshift);
1115        //    printf("PamLevel2::SetMaxShift(Int_t_) - sh negative %i - nev is %lld runnnev is %lld so maxshift set to %i \n",sh,nev,runnev,maxshift); // TOGLITOGLI
1116      }
1117    }
1118    
1119    //--------------------------------------
1120  //  //
 // This method is called once for every entry but RunInfo and SoftInfo do not change until the next run so we cannot clear them here unless we don't  
 // want to load them for each event even if they are the same...  
1121  //  //
1122  //    if(run_obj)delete run_obj;  //--------------------------------------
1123  //    if(run_obj) run_obj->Clear();  // Emiliano: Do not deallocate run_obj here, it will give segmentation fault! call clear instead  void *PamLevel2::GetPointerTo(const char* c) {
 //    if(soft_obj) soft_obj->Clear();  
   
     if(h0_obj)   h0_obj->Clear();        
     if(trk0_obj) trk0_obj->Clear();      
     if(calo0_obj) calo0_obj->Clear();    
     if(trk1_obj) trk1_obj->Clear();      
     if(trk2_obj) trk2_obj->Clear();  
     if(trkh_obj) trkh_obj->Clear();  
     if(calo1_obj)calo1_obj->Clear();  
     if(calo2_obj)calo2_obj->Clear();  
     if(tof_obj)  tof_obj->Clear();  
     if(trig_obj) trig_obj->Clear();  
     if(s4_obj)   s4_obj->Clear();  
     if(nd_obj)   nd_obj->Clear();  
     if(ac_obj)   ac_obj->Clear();  
     if(orb_obj)  orb_obj->Clear();  
       
 //    if(sorted_tracks)sorted_tracks->Clear();  
 //    sorted_tracks.Clear();  
1124    
1125      if(tsorted){    TString objname = c;
1126          tsorted->Delete();  
1127      if (!objname.CompareTo("TrkLevel1")) {
1128        if (!trk1_obj) {
1129          trk1_obj = new TrkLevel1();
1130          trk1_obj->Set();
1131      }      }
1132      if(timage){      return &trk1_obj;
1133          timage->Delete();    };
1134      if (!objname.CompareTo("TrkLevel2")) {
1135        if (!trk2_obj) {
1136          trk2_obj = new TrkLevel2();
1137          trk2_obj->Set();
1138      }      }
1139            return &trk2_obj;
1140  };    };
1141      if (!objname.CompareTo("TrkHough")) {
1142        if (!trkh_obj) {
1143          trkh_obj = new TrkHough();
1144          trkh_obj->Set();
1145        }
1146        return &trkh_obj;
1147      };
1148      if (!objname.CompareTo("CaloLevel1")) {
1149        if (!calo1_obj)
1150          calo1_obj = new CaloLevel1();
1151        return &calo1_obj;
1152      };
1153      if (!objname.CompareTo("CaloLevel2")) {
1154        if (!calo2_obj) {
1155          calo2_obj = new CaloLevel2();
1156          calo2_obj->Set();
1157        };
1158        return &calo2_obj;
1159      };
1160      if (!objname.CompareTo("ToFLevel2")) {
1161        if (!tof2_obj) {
1162          tof2_obj = new ToFLevel2();
1163          tof2_obj->Set();
1164        }
1165        return &tof2_obj;
1166      };
1167      if (!objname.CompareTo("TrigLevel2")) {
1168        if (!trig_obj)
1169          trig_obj = new TrigLevel2();
1170        return &trig_obj;
1171      };
1172      if (!objname.CompareTo("S4Level2")) {
1173        if (!s4_obj)
1174          s4_obj = new S4Level2();
1175        return &s4_obj;
1176      };
1177      if (!objname.CompareTo("NDLevel2")) {
1178        if (!nd_obj)
1179          nd_obj = new NDLevel2();
1180        return &nd_obj;
1181      };
1182      if (!objname.CompareTo("AcLevel2")) {
1183        if (!ac_obj)
1184          ac_obj = new AcLevel2();
1185        return &ac_obj;
1186      };
1187      if (!objname.CompareTo("OrbitalInfo")) {
1188        if (!orb2_obj) {
1189          orb2_obj = new OrbitalInfo();
1190          orb2_obj->Set();
1191        }
1192        return &orb2_obj;
1193      };
1194      //     if(!objname.CompareTo("OrbitalInfo")){
1195      //    if(!orb2_obj)   orb2_obj   = new OrbitalInfo();
1196      //    return &orb2_obj;
1197      //     };
1198      if (!objname.CompareTo("GPamela")) {
1199        if (!gp_obj)
1200          gp_obj = new GPamela();
1201        return &gp_obj;
1202      };
1203    
1204      if (!objname.CompareTo("RunInfo"))
1205        return &run_obj;
1206    
1207      if (!objname.CompareTo("SoftInfo"))
1208        return &soft_obj; // Emiliano
1209    
1210      if (!objname.CompareTo("ProcInfo")){
1211        if (!proc_obj)
1212          proc_obj = new ProcInfo();    
1213        return &proc_obj; // Emiliano
1214      }
1215    
1216      return NULL;
1217    }
1218    ;
1219  //--------------------------------------  //--------------------------------------
1220  //  //
1221  //  //
1222  //--------------------------------------  //--------------------------------------
1223  void *PamLevel2::GetPointerTo(const char* c ){  /**
1224     * Retrieves the calorimeter track matching the seqno-th tracker stored track.
1225     * (If seqno = -1 retrieves the self-trigger calorimeter track)
1226     */
1227    CaloTrkVar *PamLevel2::GetCaloStoredTrack(int seqno) {
1228    
1229      TString objname = c;    if (!calo2_obj)
1230        return 0;
1231    
1232      if(!objname.CompareTo("TrkLevel1"))  {    if (calo2_obj->CaloLevel2::ntrk() == 0) {
1233          if(!trk1_obj){      cout << "PamLevel2::GetCaloStoredTrack(int) : requested tracker SeqNo " << seqno
1234              trk1_obj  = new TrkLevel1();          << " but no Calorimeter tracks are stored" << endl;
1235              trk1_obj->Set();      return NULL;
1236          }    };
         return &trk1_obj;  
     };  
     if(!objname.CompareTo("TrkLevel2"))  {  
         if(!trk2_obj){    
             trk2_obj  = new TrkLevel2();  
             trk2_obj->Set();  
         }  
         return &trk2_obj;  
     };  
     if(!objname.CompareTo("TrkHough"))   {  
         if(!trkh_obj)  trkh_obj  = new TrkHough();  
         return &trkh_obj;  
     };  
     if(!objname.CompareTo("CaloLevel1")) {  
         if(!calo1_obj) calo1_obj = new CaloLevel1();  
         return &calo1_obj;  
     };  
     if(!objname.CompareTo("CaloLevel2")) {  
         if(!calo2_obj){  
             calo2_obj = new CaloLevel2();  
             calo2_obj->Set();  
         };  
         return &calo2_obj;  
     };  
     if(!objname.CompareTo("ToFLevel2"))  {  
         if(!tof_obj){  
             tof_obj   = new ToFLevel2();  
             tof_obj->Set();  
         }  
         return &tof_obj;  
     };  
     if(!objname.CompareTo("TrigLevel2")) {  
         if(!trig_obj)  trig_obj  = new TrigLevel2();  
         return &trig_obj;  
     };  
     if(!objname.CompareTo("S4Level2"))   {  
         if(!s4_obj)    s4_obj    = new S4Level2();  
         return &s4_obj;  
     };  
     if(!objname.CompareTo("NDLevel2"))   {  
         if(!nd_obj)    nd_obj    = new NDLevel2();  
         return &nd_obj;  
     };  
     if(!objname.CompareTo("AcLevel2"))   {  
         if(!ac_obj)    ac_obj    = new AcLevel2();  
         return &ac_obj;  
     };  
     if(!objname.CompareTo("OrbitalInfo")){  
         if(!orb_obj)   orb_obj   = new OrbitalInfo();  
         return &orb_obj;  
     };  
       
     if(!objname.CompareTo("RunInfo"))return &run_obj;  
1237    
1238      if(!objname.CompareTo("SoftInfo"))return &soft_obj; // Emiliano    CaloTrkVar *c = 0;
1239      Int_t it_calo = 0;
1240    
1241      return NULL;    do {
1242  };      c = calo2_obj->CaloLevel2::GetCaloTrkVar(it_calo);
1243        it_calo++;
1244      } while (c && seqno != c->trkseqno && it_calo < calo2_obj->CaloLevel2::ntrk());
1245    
1246      if (!c || seqno != c->trkseqno) {
1247        c = 0;
1248        if (seqno != -1)
1249          cout << "PamLevel2::GetCaloStoredTrack(int) : requested tracker SeqNo " << seqno
1250              << " does not match Calorimeter stored tracks" << endl;
1251      };
1252      return c;
1253    
1254    }
1255    ;
1256  //--------------------------------------  //--------------------------------------
1257  //  //
1258  //  //
1259  //--------------------------------------  //--------------------------------------
1260  /**  /**
1261   * Retrieves the calorimeter track matching the seqno-th tracker stored track.   * Retrieves the ToF track matching the seqno-th tracker stored track.
1262   * (If seqno = -1 retrieves the self-trigger calorimeter track)   * (If seqno = -1 retrieves the tracker-independent tof track)
1263   */   */
1264   CaloTrkVar *PamLevel2::GetCaloStoredTrack(int seqno){  ToFTrkVar *PamLevel2::GetToFStoredTrack(int seqno) {
1265        
1266       if( !calo2_obj )return 0;    if (!tof2_obj)
1267        return 0;
1268    
1269      if (tof2_obj->ToFLevel2::ntrk() == 0) {
1270        cout << "PamLevel2::GetToFStoredTrack(int) : requested tracker SeqNo " << seqno << " but no ToF tracks are stored"
1271            << endl;
1272        return NULL;
1273      };
1274    
1275      ToFTrkVar *c = 0;
1276      Int_t it_tof = 0;
1277    
1278      do {
1279        c = tof2_obj->ToFLevel2::GetToFTrkVar(it_tof);
1280        it_tof++;
1281      } while (c && seqno != c->trkseqno && it_tof < tof2_obj->ToFLevel2::ntrk());
1282    
1283      if (!c || seqno != c->trkseqno) {
1284        c = 0;
1285        if (seqno != -1)
1286          cout << "PamLevel2::GetToFStoredTrack(int) : requested tracker SeqNo " << seqno
1287              << " does not match ToF stored tracks" << endl;
1288      };
1289      return c;
1290    
1291    }
1292    ;
1293    
      if( calo2_obj->CaloLevel2::ntrk()==0 ){  
          cout << "PamLevel2::GetCaloStoredTrack(int) : requested tracker SeqNo "<< seqno <<" but no Calorimeter tracks are stored"<<endl;  
          return NULL;  
      };  
       
      CaloTrkVar *c = 0;  
      Int_t it_calo=0;  
       
      do{  
          c = calo2_obj->CaloLevel2::GetCaloTrkVar(it_calo);  
          it_calo++;  
      } while( c && seqno != c->trkseqno && it_calo < calo2_obj->CaloLevel2::ntrk());      
       
      if(!c || seqno != c->trkseqno){  
          c = 0;  
          if(seqno!=-1)cout << "PamLevel2::GetCaloStoredTrack(int) : requested tracker SeqNo "<< seqno <<" does not match Calorimeter stored tracks"<<endl;  
      };  
      return c;  
       
  };  
1294  //--------------------------------------  //--------------------------------------
1295   //  //
1296   //  //
1297  //--------------------------------------  //--------------------------------------
1298  /**  /**
1299    * Retrieves the ToF track matching the seqno-th tracker stored track.   * Retrieves the OrbitalInfo track matching the seqno-th tracker stored track.
1300    * (If seqno = -1 retrieves the tracker-independent tof track)   * (If seqno = -1 retrieves the tracker-independent tof related track)
1301   */   */
1302   ToFTrkVar *PamLevel2::GetToFStoredTrack(int seqno){  OrbitalInfoTrkVar *PamLevel2::GetOrbitalInfoStoredTrack(int seqno) {
           
      if( !tof_obj )return 0;  
1303    
1304       if( tof_obj->ToFLevel2::ntrk()==0 ){    if (!orb2_obj)
1305           cout << "PamLevel2::GetToFStoredTrack(int) : requested tracker SeqNo "<< seqno <<" but no ToF tracks are stored"<<endl;      return 0;
1306           return NULL;  
1307       };    if (orb2_obj->OrbitalInfo::ntrk() == 0) {
1308            //       // TRICK BEGIN
1309       ToFTrkVar *c = 0;      //       OrbitalInfoTrkVar  *r = new OrbitalInfoTrkVar(); // TEMPORARY TRICK
1310       Int_t it_tof=0;      //       Int_t nn = 0;
1311            //       TClonesArray &tor = *orb2_obj->OrbitalInfoTrk;
1312       do{      //       for(Int_t nt=0; nt < tof2_obj->ToFLevel2::ntrk(); nt++){
1313           c = tof_obj->ToFLevel2::GetToFTrkVar(it_tof);      //  //
1314           it_tof++;      //  ToFTrkVar *ptt = tof2_obj->ToFLevel2::GetToFTrkVar(nt);
1315       } while( c && seqno != c->trkseqno && it_tof < tof_obj->ToFLevel2::ntrk());              //  if ( ptt->trkseqno != -1  ){
1316            //    //
1317       if(!c || seqno != c->trkseqno){      //    r->trkseqno = ptt->trkseqno;
1318           c = 0;      //    //
1319           if(seqno!=-1)cout << "PamLevel2::GetToFStoredTrack(int) : requested tracker SeqNo "<< seqno <<" does not match ToF stored tracks"<<endl;      //    r->Eij = 0;
1320       };      //    //
1321       return c;      //    r->Sij = 0;
1322            //    //
1323   };      //    r->pitch = -1000.;
1324        //    //
1325        //    r->cutoff = -1000.;
1326        //    //
1327        //    new(tor[nn]) OrbitalInfoTrkVar(*r);
1328        //    nn++;
1329        //    //
1330        //    r->Clear();
1331        //    //
1332        //  };
1333        //       };
1334        //       delete r;
1335        //       OrbitalInfoTrkVar *c = 0;
1336        //       c = orb2_obj->OrbitalInfo::GetOrbitalInfoTrkVar(0);
1337        //       return c;
1338        //       //TRICK END
1339        cout << "PamLevel2::GetOrbitalInfoStoredTrack(int) : requested tracker SeqNo " << seqno
1340            << " but no OrbitalInfo tracks are stored" << endl;
1341        return NULL;
1342      };
1343    
1344      OrbitalInfoTrkVar *c = 0;
1345      Int_t it_tof = 0;
1346    
1347      do {
1348        c = orb2_obj->OrbitalInfo::GetOrbitalInfoTrkVar(it_tof);
1349        it_tof++;
1350      } while (c && seqno != c->trkseqno && it_tof < orb2_obj->OrbitalInfo::ntrk());
1351    
1352      if (!c || seqno != c->trkseqno) {
1353        c = 0;
1354        if (seqno != -1)
1355          cout << "PamLevel2::GetOrbitalInfoStoredTrack(int) : requested tracker SeqNo " << seqno
1356              << " does not match OrbitalInfo stored tracks" << endl;
1357      };
1358      return c;
1359    
1360    }
1361    ;
1362    
1363  //--------------------------------------  //--------------------------------------
1364   //  //
1365   //  //
1366  //--------------------------------------  //--------------------------------------
1367  /**  /**
1368   * Give the pamela track associated to a tracker track, retrieving related calorimeter and tof track information.   * Give the pamela track associated to a tracker track, retrieving related calorimeter, orbitalinfo and tof track information.
1369   */   */
1370   PamTrack* PamLevel2::GetPamTrackAlong(TrkTrack* t){  PamTrack* PamLevel2::GetPamTrackAlong(TrkTrack* t) {
       
      cout <<"PamLevel2::GetPamTrackAlong(TrkTrack* t) **obsolete** "<<endl;  
      cout <<"(if you use it, remember to delete the PamTrack object)"<<endl;  
1371    
1372       CaloTrkVar *c = 0;    cout << "PamLevel2::GetPamTrackAlong(TrkTrack* t) **obsolete** " << endl;
1373       ToFTrkVar  *o = 0;    cout << "(if you use it, remember to delete the PamTrack object)" << endl;
1374        
1375       if(CAL2) c = GetCaloStoredTrack(t->GetSeqNo());    CaloTrkVar *c = 0;
1376       if(TOF) o = GetToFStoredTrack(t->GetSeqNo());    ToFTrkVar *o = 0;
1377          OrbitalInfoTrkVar *r = 0;
1378  //    if(t && c && o)track = new PamTrack(t,c,o);  
1379       PamTrack *track = new PamTrack(t,c,o);    if (CAL2)
1380            c = GetCaloStoredTrack(t->GetSeqNo());
1381       return track;    if (TOF)
1382        o = GetToFStoredTrack(t->GetSeqNo());
1383   };    if (ORB)
1384        r = GetOrbitalInfoStoredTrack(t->GetSeqNo());
1385    
1386      //    if(t && c && o)track = new PamTrack(t,c,o);
1387      PamTrack *track = new PamTrack(t, c, o, r);
1388    
1389      return track;
1390    
1391    }
1392    ;
1393  //--------------------------------------  //--------------------------------------
1394  //  //
1395  //  //
1396  //--------------------------------------  //--------------------------------------
1397  /**  /**
1398   * Retrieves the it-th stored track.   * Retrieves the it-th stored track.
1399   * It override TrkLevel2::GetTrack(int it).   * It override TrkLevel2::GetTrack(int it).
1400   * @param itrk Track number, ranging from 0 to GetNTracks().   * @param itrk Track number, ranging from 0 to GetNTracks().
1401   */   */
1402    
1403  PamTrack* PamLevel2::GetStoredTrack(Int_t itrk){  PamTrack* PamLevel2::GetStoredTrack(Int_t itrk) {
1404        
1405      cout <<"PamLevel2::GetStoredTrack(Int_t itrk) **to-be-updated** "<<endl;    cout << "PamLevel2::GetStoredTrack(Int_t itrk) **to-be-updated** " << endl;
1406      cout <<"for the moment, better use separately the methods: TrkLevel2::GetStoredTrack(seqno) CaloLevel2::GetCaloTrkVar(Int_t notrack) ToFLevel2::GetToFTrkVar(Int_t notrack)"<<endl;    cout
1407      cout <<"(if you use it, remember to delete the PamTrack object)"<<endl;        << "for the moment, better use separately the methods: TrkLevel2::GetStoredTrack(seqno) CaloLevel2::GetCaloTrkVar(Int_t notrack) ToFLevel2::GetToFTrkVar(Int_t notrack) OrbitalInfo::GetOrbitalInfoTrkVar(Int_t notrack)"
1408      PamTrack *track = 0;        << endl;
1409          cout << "(if you use it, remember to delete the PamTrack object)" << endl;
1410      if( itrk >=0 && itrk < trk2_obj->TrkLevel2::ntrk() ){    PamTrack *track = 0;
1411            
1412          TrkTrack *t = trk2_obj->TrkLevel2::GetStoredTrack(itrk);    if (itrk >= 0 && itrk < trk2_obj->TrkLevel2::ntrk()) {
1413          track = GetPamTrackAlong(t);  
1414                TrkTrack *t = trk2_obj->TrkLevel2::GetStoredTrack(itrk);
1415                track = GetPamTrackAlong(t);
1416    
1417      }
1418      else {
1419        cout << "PamLevel2::GetStoredTrack(int) : tracker track SeqNo " << itrk << " does not exist (GetNTracks() = "
1420            << trk2_obj->TrkLevel2::GetNTracks() << ")" << endl;
1421      };
1422    
1423      return track;
1424    
     }else{  
         cout << "PamLevel2::GetStoredTrack(int) : tracker track SeqNo "<< itrk <<" does not exist (GetNTracks() = "<<trk2_obj->TrkLevel2::GetNTracks()<<")"<<endl;  
     };  
       
     return track;  
       
1425  }  }
1426  //--------------------------------------  //--------------------------------------
1427  //  //
1428    
1429    /**
1430     * Sort physical (tracker) tracks. Left here as backward compatibility method.
1431     **/
1432    void PamLevel2::SortTracks(TString how) {
1433      printf(
1434          " WARNING! obsolete, use SortTracks() and SetSortingMethod(TString) instead! \n Setting sorting method to %s \n",
1435          how.Data());
1436      howtosort = how;
1437      SortTracks();
1438    }
1439    ;
1440    
1441  //  //
1442  //--------------------------------------  //--------------------------------------
1443  /**  /**
1444   * Sort physical (tracker) tracks and stores them in the TRefArray (of TrkTrack objects) which pointer is  PamLevel2::sorted_tracks.   * Sort physical (tracker) tracks.
1445   * @param how String to set the sorting cryterium (es: "CAL" or "TRK+CAL+TOF" ecc...).   * @param how String to set the sorting cryterium (es: "CAL" or "TRK+CAL+TOF" ecc...).
1446   * Sorting cryteria:   * Sorting cryteria:
1447   * TRK: lower chi**2   * TRK: lower chi**2
1448   * CAL: lower Y spatial residual on the first calorimeter plane   * CAL: lower Y spatial residual on the first calorimeter plane
1449   * TOF: bigger numebr of hit PMTs along the track, on S12 S21 S32 (where paddles are along the Y axis).   * TOF: bigger numebr of hit PMTs along the track, on S12 S21 S32 (where paddles are along the Y axis).
1450     * S1: (ask Emiliano)
1451     * S2: (ask Emiliano)
1452     * S3: (ask Emiliano)
1453     * GP: more GP hits
1454   * The default sorting cryterium is "TOF+CAL".   * The default sorting cryterium is "TOF+CAL".
1455   *   *
1456   * The total number of physical tracks is always given by GetNTracks() and the it-th physical track can be retrieved by means of the methods GetTrack(int it) and GetTrack(int it, TString how).   * The total number of physical tracks is always given by GetNTracks() and the it-th physical track can be retrieved by means of the methods GetTrack(int it) and GetTrack(int it, TString how).
1457   */   */
1458  void PamLevel2::SortTracks(TString how){  void PamLevel2::SortTracks() {
1459    
1460  //    cout <<" PamLevel2::SortTracks(TString how) "<<endl;    //Check if the current event has already been sorted
1461      if( !trk2_obj ){    if (issorted && lastsorted == GetReadEntry()) {
1462          cout << "void PamLevel2::SortTracks(TString how):  TrkLevel2 not loaded !!!";      return;
1463          return;    }
1464      };    //Reset the sort flags, just in case something will go wrong...
1465  //    cout << "call SortTracs() "<<endl;    issorted = false;
1466      lastsorted = -1;
1467    
1468      TString how = howtosort;
1469    
1470      //  cout <<" PamLevel2::SortTracks(TString how) "<<endl;
1471      if (!trk2_obj) {
1472        cout << "void PamLevel2::SortTracks():  TrkLevel2 not loaded !!!";
1473        return;
1474      };
1475    //Save current Object count    //Save current Object count
1476      Int_t ObjectNumber = TProcessID::GetObjectCount();    Int_t ObjectNumber = TProcessID::GetObjectCount();
1477    
1478      // create TCloneArrays to store tracks and its images
1479      if (!tsorted)
1480        tsorted = new TClonesArray("PamTrack", trk2_obj->GetNTracks());
1481      tsorted->Clear("C+C");//Delete();
1482      TClonesArray &ttsorted = *tsorted;
1483    
1484      if (!timage)
1485        timage = new TClonesArray("PamTrack", trk2_obj->GetNTracks());
1486      timage->Clear("C+C");//Delete();
1487      TClonesArray &ttimage = *timage;
1488    
1489    
1490    
1491      //--------------------------------------------------
1492      // retrieve sorting method
1493      //--------------------------------------------------
1494      Bool_t use_TRK = how.Contains("TRK", TString::kIgnoreCase);
1495      Bool_t use_CAL = how.Contains("CAL", TString::kIgnoreCase);
1496      Bool_t use_TOF = how.Contains("TOF", TString::kIgnoreCase);
1497      Bool_t use_S1 = how.Contains("S1", TString::kIgnoreCase);
1498      Bool_t use_S2 = how.Contains("S2", TString::kIgnoreCase);
1499      Bool_t use_S3 = how.Contains("S3", TString::kIgnoreCase);
1500      Bool_t use_GP = how.Contains("GP", TString::kIgnoreCase);
1501    
1502      if (use_TOF) {
1503        use_S1 = true;
1504        use_S2 = true;
1505        use_S3 = true;
1506      };
1507      if (!CAL2 && use_CAL)
1508        use_CAL = false;
1509      if (!TOF) {
1510        use_TOF = false;
1511        use_S1 = false;
1512        use_S2 = false;
1513        use_S3 = false;
1514      }
1515      if (!GP) {
1516        use_GP = false;
1517      }
1518    
1519      if (!TRK2) {
1520        cout << "SortTracks() : without tracker does not work!!! (not yet)" << endl;
1521        return;
1522      };
1523    
1524      //   cout << "use_CAL "<<use_CAL<<" use_TOF "<<use_TOF<<" use_TRK "<<use_TRK <<endl;
1525    
1526    
1527      //--------------------------------------------------
1528      // loop over "physical" tracks sorted by the tracker
1529      //--------------------------------------------------
1530      for (Int_t i = 0; i < trk2_obj->TrkLevel2::GetNTracks(); i++) {
1531    
1532        TrkTrack *ts = 0;
1533        CaloTrkVar *cs = 0;
1534        ToFTrkVar *os = 0;
1535        OrbitalInfoTrkVar *rs = 0;
1536    
1537        // get tracker tracks
1538        TrkTrack *tp = trk2_obj->TrkLevel2::GetTrack(i); //tracker
1539        CaloTrkVar *cp = GetCaloStoredTrack(tp->GetSeqNo());
1540        ToFTrkVar *op = GetToFStoredTrack(tp->GetSeqNo());
1541        OrbitalInfoTrkVar *rp = GetOrbitalInfoStoredTrack(tp->GetSeqNo());
1542    
1543        TrkTrack *ti = 0; //tracker (image)
1544        CaloTrkVar *ci = 0;
1545        ToFTrkVar *oi = 0;
1546        OrbitalInfoTrkVar *ri = 0;
1547        //  cout << "trk track n. "<<i << " "<<hex<< tp <<dec<< endl;
1548        // if track has an image, check image selection
1549    
1550        Int_t tp_score = 0; //main track sorted by the tracker
1551        Int_t ti_score = 0; //image track
1552        Int_t totp_score = 0; //main track sorted by the tracker
1553        Int_t toti_score = 0; //image track
1554    
1555        if (tp->HasImage()) {
1556    
1557          ti = trk2_obj->TrkLevel2::GetTrackImage(i); //tracker (image)
1558          ci = GetCaloStoredTrack(ti->GetSeqNo());
1559          oi = GetToFStoredTrack(ti->GetSeqNo());
1560          ri = GetOrbitalInfoStoredTrack(ti->GetSeqNo());
1561    
1562          //            cout << "its image "<<i << " "<<hex<< ti <<dec<< endl;
1563    
1564          //assign starting scores
1565          tp_score = 0; //main track sorted by the tracker
1566          ti_score = 0; //image track
1567    
1568          // -----------------------------------------------------------------------------------------
1569          // *****************************************************************************************
1570          // -----------------------------------------------------------------------------------------
1571          // calorimeter check
1572          // -----------------------------------------------------------------------------------------
1573          if (use_CAL && !calo2_obj) {
1574            cout << "void PamLevel2::SortTracks(): howtosort= " << how << " but CaloLevel2 not loaded !!!";
1575            return;
1576          };
1577          if (use_CAL && !cp && ci) {
1578            ti_score++;
1579            toti_score++;
1580          };
1581          if (use_CAL && cp && !ci) {
1582            tp_score++;
1583            totp_score++;
1584          };
1585          if (use_CAL && cp && ci && true) {
1586    
1587            if (cp->npresh > ci->npresh && true) {
1588              tp_score++;
1589              totp_score++;
1590            };
1591            if (cp->npresh < ci->npresh && true) {
1592              ti_score++;
1593              toti_score++;
1594            };
1595    
1596            //      cout << "CALO "<<tp_score<<ti_score<<endl;
1597    
1598          };
1599          // -----------------------------------------------------------------------------------------
1600          // *****************************************************************************************
1601          // -----------------------------------------------------------------------------------------
1602          // TOF check
1603          // -----------------------------------------------------------------------------------------
1604          // check the number of hit pmts along the track
1605          // on S12 S21 and S32, where paddles are parallel to Y axis
1606          if ((use_TOF || use_S1 || use_S2 || use_S3) && !tof2_obj) {
1607            cout << "void PamLevel2::SortTracks(): howtosort= " << how << " but ToFLevel2 not loaded !!!";
1608            return;
1609          };
1610          //
1611          if ((use_TOF || use_S1 || use_S2 || use_S3) && !op && oi) {
1612            ti_score++;
1613            toti_score++;
1614          };
1615          if ((use_TOF || use_S1 || use_S2 || use_S3) && op && !oi) {
1616            tp_score++;
1617            totp_score++;
1618          };
1619          if ((use_TOF || use_S1 || use_S2 || use_S3) && op && oi) {
1620            //
1621            Float_t sen = 0.;
1622            for (Int_t ih = 0; ih < op->npmtadc; ih++) {
1623              Int_t pl = tof2_obj->GetPlaneIndex((op->pmtadc).At(ih));
1624              if (pl == 2 || pl == 3 || pl == 4 || pl == 5)
1625                sen += (op->dedx).At(ih);
1626            };
1627            for (Int_t ih = 0; ih < oi->npmtadc; ih++) {
1628              Int_t pl = tof2_obj->GetPlaneIndex((oi->pmtadc).At(ih));
1629              if (pl == 2 || pl == 3 || pl == 4 || pl == 5)
1630                sen += (oi->dedx).At(ih);
1631            };
1632            //
1633            if (sen >= sortthr && false) { // temporary disabled NUCLEI special algorithm since the new one should work for every particle (to be checked!)
1634              //printf(" IS A NUCLEUS! en = %f \n",sen);
1635              //
1636              // is a nucleus use a different algorithm
1637              //
1638              Int_t nz = 6;
1639              Float_t zin[6]; // << define TOF z-coordinates
1640              for (Int_t ip = 0; ip < nz; ip++)
1641                zin[ip] = tof2_obj->ToFLevel2::GetZTOF(tof2_obj->ToFLevel2::GetToFPlaneID(ip)); // << read ToF plane z-coordinates
1642              Trajectory *tr = new Trajectory(nz, zin);
1643              //
1644              Int_t nphit_p = 0;
1645              Int_t nphit_i = 0;
1646              Float_t enhit_p = 0.;
1647              Float_t enhit_i = 0.;
1648              //
1649              for (Int_t ih = 0; ih < op->npmtadc; ih++) {
1650                Int_t pl = tof2_obj->GetPlaneIndex((op->pmtadc).At(ih));
1651                if (pl == 1 || pl == 2 || pl == 5) {
1652                  nphit_p++;
1653                  enhit_p += (op->dedx).At(ih);
1654                };
1655              };
1656              //
1657              tp->DoTrack2(tr);
1658              //
1659              if (fabs(tr->y[0] - oi->ytofpos[0]) < 2.) {
1660                for (Int_t ih = 0; ih < op->npmtadc; ih++) {
1661                  Int_t pl = tof2_obj->GetPlaneIndex((op->pmtadc).At(ih));
1662                  if (pl == 0) {
1663                    nphit_p++;
1664                    enhit_p += (op->dedx).At(ih);
1665                  };
1666                };
1667              };
1668              if (fabs(tr->y[3] - oi->ytofpos[1]) < 2.) {
1669                for (Int_t ih = 0; ih < op->npmtadc; ih++) {
1670                  Int_t pl = tof2_obj->GetPlaneIndex((op->pmtadc).At(ih));
1671                  if (pl == 3) {
1672                    nphit_p++;
1673                    enhit_p += (op->dedx).At(ih);
1674                  };
1675                };
1676              };
1677              if (fabs(tr->y[4] - oi->ytofpos[2]) < 2.) {
1678                for (Int_t ih = 0; ih < op->npmtadc; ih++) {
1679                  Int_t pl = tof2_obj->GetPlaneIndex((op->pmtadc).At(ih));
1680                  if (pl == 4) {
1681                    nphit_p++;
1682                    enhit_p += (op->dedx).At(ih);
1683                  };
1684                };
1685              };
1686    
1687              for (Int_t ih = 0; ih < oi->npmtadc; ih++) {
1688                Int_t pl = tof2_obj->GetPlaneIndex((oi->pmtadc).At(ih));
1689                if (pl == 1 || pl == 2 || pl == 5) {
1690                  nphit_i++;
1691                  enhit_i += (op->dedx).At(ih);
1692                };
1693              };
1694              //
1695              ti->DoTrack2(tr);
1696              //
1697              if (fabs(tr->y[0] - oi->ytofpos[0]) < 2.) {
1698                for (Int_t ih = 0; ih < oi->npmtadc; ih++) {
1699                  Int_t pl = tof2_obj->GetPlaneIndex((oi->pmtadc).At(ih));
1700                  if (pl == 0) {
1701                    nphit_i++;
1702                    enhit_i += (op->dedx).At(ih);
1703                  };
1704                };
1705              };
1706              if (fabs(tr->y[3] - oi->ytofpos[1]) < 2.) {
1707                for (Int_t ih = 0; ih < oi->npmtadc; ih++) {
1708                  Int_t pl = tof2_obj->GetPlaneIndex((oi->pmtadc).At(ih));
1709                  if (pl == 3) {
1710                    nphit_i++;
1711                    enhit_i += (op->dedx).At(ih);
1712                  };
1713                };
1714              };
1715              if (fabs(tr->y[4] - oi->ytofpos[2]) < 2.) {
1716                for (Int_t ih = 0; ih < oi->npmtadc; ih++) {
1717                  Int_t pl = tof2_obj->GetPlaneIndex((oi->pmtadc).At(ih));
1718                  if (pl == 4) {
1719                    nphit_i++;
1720                    enhit_i += (op->dedx).At(ih);
1721                  };
1722                };
1723              };
1724    
1725              if ((use_TOF || use_S1 || use_S2 || use_S3) && (nphit_p + nphit_i) != 0 && true) {
1726    
1727                //      printf(" seqno %i nphit_p %i nphit_i %i enhit_p %f enhit_i %f \n",trk2_obj->TrkLevel2::GetSeqNo(i),nphit_p,nphit_i,enhit_p,enhit_i);
1728                //      printf(" score p %i score i %i \n",tp_score,ti_score);
1729                //            if( enhit_p > enhit_i ) tp_score++;
1730                //            if( nphit_p >= nphit_i && enhit_p > enhit_i ) tp_score++;
1731                if (nphit_p > nphit_i)
1732                  tp_score++;
1733                if (nphit_p < nphit_i)
1734                  ti_score++;
1735                if (nphit_p == nphit_i) {
1736                  if (enhit_p > enhit_i)
1737                    tp_score++;
1738                  else
1739                    ti_score++;
1740                };
1741                //      printf(" dopo score p %i score i %i \n",tp_score,ti_score);
1742              };
1743              delete tr;
1744              //
1745            }
1746            else {
1747              // -------------
1748              // NOT a NUCLEUS
1749              // -------------
1750              //printf(" NOT a NUCLEUS! en = %f \n",sen);
1751    
1752              Int_t nphit_p = 0;
1753              Int_t nphit_i = 0;
1754    
1755              /*                            cout << "track: npmtadc "<< op->npmtadc << endl;
1756               cout << "track: npmttdc "<< op->npmttdc << endl;
1757               cout << "image: npmtadc "<< oi->npmtadc << endl;
1758               cout << "image: npmttdc "<< oi->npmttdc << endl;*/
1759    
1760              //      for (Int_t ih=0; ih < op->npmtadc; ih++){
1761              //        Int_t pl = tof2_obj->GetPlaneIndex( (op->pmtadc).At(ih) );
1762              //        if(pl == 1 || pl == 2 || pl == 5)nphit_p++;
1763              //      };
1764    
1765              //      for (Int_t ih=0; ih < oi->npmtadc; ih++){
1766              //        Int_t pl = tof2_obj->GetPlaneIndex( (oi->pmtadc).At(ih) );
1767              //        if(pl == 1 || pl == 2 || pl == 5)nphit_i++;
1768              //      };
1769              // --- modified to count tdc signals (more efficient?)
1770              // --- and to implement check on tdcflag
1771              for (Int_t ih = 0; ih < op->npmttdc; ih++) {
1772                Int_t pl = tof2_obj->GetPlaneIndex((op->pmttdc).At(ih));
1773                //      if( (op->tdcflag).At(ih)==0 && (pl == 1 || pl == 2 || pl == 5) )nphit_p++;
1774                if ((use_S1 && (pl == 0 || pl == 1)) || (use_S2 && (pl == 2 || pl == 3))
1775                    || (use_S3 && (pl == 4 || pl == 5))) {
1776                  if ((op->tdcflag).At(ih) == 0)
1777                    nphit_p++;
1778                };
1779              };
1780    
1781              for (Int_t ih = 0; ih < oi->npmttdc; ih++) {
1782                Int_t pl = tof2_obj->GetPlaneIndex((oi->pmttdc).At(ih));
1783                //      if( (oi->tdcflag).At(ih)==0 && (pl == 1 || pl == 2 || pl == 5) )nphit_i++;
1784                if ((use_S1 && (pl == 0 || pl == 1)) || (use_S2 && (pl == 2 || pl == 3))
1785                    || (use_S3 && (pl == 4 || pl == 5))) {
1786                  if ((oi->tdcflag).At(ih) == 0)
1787                    nphit_i++;
1788                };
1789              };
1790    
1791              if ((nphit_p + nphit_i) != 0 && true) {
1792    
1793                if (nphit_p != nphit_i) {
1794                  totp_score += nphit_p;
1795                  toti_score += nphit_i;
1796                  tp_score += nphit_p;
1797                  ti_score += nphit_i;
1798                };
1799                //      if     ( nphit_p > nphit_i) tp_score+=nphit_p;
1800                //      else if( nphit_p < nphit_i) ti_score+=nphit_i;
1801                //      else ;//niente
1802              };
1803            };
1804            //      cout << "TOF "<<tp_score<<ti_score<<endl;
1805          };
1806    
1807          //      if(tp_score == ti_score) use_TRK = true;
1808    
1809    
1810          // -----------------------------------------------------------------------------------------
1811          // *****************************************************************************************
1812          // -----------------------------------------------------------------------------------------
1813          // tracker check
1814          // -----------------------------------------------------------------------------------------
1815          // chi**2 difference is not always large enough to distinguish among
1816          // the real track and its image.
1817          // Tracker check will be applied always when calorimeter and tof information is ambiguous.
1818          // *** MODIFIED ON AUGUST 2007 ***
1819          if (use_TRK) {
1820            //      if(      tp->chi2 > 0 && tp->chi2 < ti->chi2 ) tp_score++ ;
1821            //      else if( ti->chi2 > 0 && ti->chi2 < tp->chi2 ) ti_score++ ;
1822    
1823            // CHECK 1 : number of points along X
1824            if (tp->GetNX() >= ti->GetNX()) {
1825              tp_score++;
1826              totp_score++;
1827            };
1828            if (tp->GetNX() <= ti->GetNX()) {
1829              ti_score++;
1830              toti_score++;
1831            };
1832            // CHECK 2 : number of points along Y
1833            if (tp->GetNY() >= ti->GetNY()) {
1834              tp_score++;
1835              totp_score++;
1836            };
1837            if (tp->GetNY() <= ti->GetNY()) {
1838              ti_score++;
1839              toti_score++;
1840            };
1841    
1842            //      cout << "TRK "<<tp_score<<ti_score<<endl;
1843          };
1844    
1845          // -----------------------------------------------------------------------------------------
1846          // *****************************************************************************************
1847          // -----------------------------------------------------------------------------------------
1848          // GPamela check
1849          // -----------------------------------------------------------------------------------------
1850    
1851          //---------------------------------------------------
1852          // count the number of GP hits
1853          //---------------------------------------------------
1854          if (use_GP) {
1855            int ngphits_p = 0;
1856            int ngphits_i = 0;
1857            float toll = 0.02; //200 micron
1858            for (int ih = 0; ih < GetGPamela()->Nthspe; ih++) {
1859              int ip = (Int_t) GetGPamela()->Itrpb[ih] - 1;
1860              if (tp && tp->YGood(ip) && fabs(tp->ym[ip] - GetGPamela()->Yavspe[ih]) < toll && true)
1861                ngphits_p++;
1862              if (ti && ti->YGood(ip) && fabs(ti->ym[ip] - GetGPamela()->Yavspe[ih]) < toll && true)
1863                ngphits_i++;
1864            }
1865            if (ngphits_p > ngphits_i && true) {
1866              tp_score++;
1867              totp_score++;
1868            }
1869            if (ngphits_p < ngphits_i && true) {
1870              ti_score++;
1871              toti_score++;
1872            }
1873          }
1874    
1875          // *-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*
1876          // the winner is....
1877          // *-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*
1878          if (tp_score > ti_score) {
1879    
1880          }
1881          else if (tp_score < ti_score) {
1882    
1883  //    cout << "ObjectNumber  "<<ObjectNumber <<endl;          ts = ti;//its image!!
1884            cs = ci;
1885            os = oi;
1886            rs = ri;
1887            Int_t totis = toti_score;
1888    
1889            ti = tp;//its image!!
1890            ci = cp;
1891            oi = op;
1892            ri = rp;
1893    
1894            tp = ts;//its image!!
1895            cp = cs;
1896            op = os;
1897            rp = rs;
1898    
1899            toti_score = totp_score;
1900            totp_score = totis;
1901    
1902          }
1903          else {
1904    
1905            //      cout << "Warning - track image ambiguity not solved" << endl;
1906    
1907          };
1908    
1909  //     if(!sorted_tracks)sorted_tracks = new TRefArray();      }
1910  //     sorted_tracks->Clear();      else {
1911  //    sorted_tracks.Clear();        totp_score = 1;
1912          toti_score = 0;
1913    
1914          //            ts = tp;
1915          //            cs = cp;
1916          //            os = op;
1917        };
1918    
1919        //  cout <<" SortTracks() "<<i<<" -- "<<ts<<endl;
1920        //  sorted_tracks->Add(ts);//save the track in the sorted array
1921        //  sorted_tracks.Add(ts);//save the track in the sorted array
1922        //  sorted_tracks.Add(tp);//save the track in the sorted array
1923        //  cout << "SortTracks:: sorted_tracks->Add(it) "<<i<<" "<<ts<<endl;
1924        //  cout<<"o "<<tp<<endl;
1925        //  cout<<"o "<<cp<<endl;
1926        //  cout<<"o "<<op<<endl;
1927    
1928        new (ttsorted[i]) PamTrack(tp, cp, op, rp);
1929        new (ttimage[i]) PamTrack(ti, ci, oi, ri);
1930    
1931        ((PamTrack*) (ttsorted[i]))->SetPScore(totp_score);
1932        ((PamTrack*) (ttsorted[i]))->SetIScore(toti_score);
1933        ((PamTrack*) (ttimage[i]))->SetPScore(totp_score);
1934        ((PamTrack*) (ttimage[i]))->SetIScore(toti_score);
1935      };
1936    
1937      if(!tsorted)tsorted = new TClonesArray("PamTrack",trk2_obj->GetNTracks());    if (tsorted->GetEntries() != trk2_obj->GetNTracks()) {
1938        cout << "void PamLevel2::SortTracks(): tsorted->GetEntries() " << tsorted->GetEntries()
1939            << " != trk2_obj->GetNTracks() = " << trk2_obj->GetNTracks() << endl;
1940      tsorted->Delete();      tsorted->Delete();
1941      TClonesArray &ttsorted = *tsorted;      tsorted = 0;
     if(!timage)timage = new TClonesArray("PamTrack",trk2_obj->GetNTracks());  
1942      timage->Delete();      timage->Delete();
1943      TClonesArray &ttimage = *timage;      timage = 0;
1944      }
1945    
1946      //Restore Object count
1947      //To save space in the table keeping track of all referenced objects
1948      //We reset the object count to what it was at the beginning of the event.
1949      TProcessID::SetObjectCount(ObjectNumber);
1950    
1951      //Everything went fine so the current event can be tagged as sorted
1952      issorted = true;
1953      lastsorted = GetReadEntry();
1954    
1955    }
1956    ;
1957    //
1958    //--------------------------------------
1959    /**
1960     * Sort physical (tracker) tracks.
1961     * @param how String to set the sorting cryterium (es: "CAL" or "TRK+CAL+TOF" ecc...).
1962     * Sorting cryteria:
1963     * TRK: lower chi**2
1964     * CAL: lower Y spatial residual on the first calorimeter plane
1965     * TOF: bigger numebr of hit PMTs along the track, on S12 S21 S32 (where paddles are along the Y axis).
1966     * S1: (ask Emiliano)
1967     * S2: (ask Emiliano)
1968     * S3: (ask Emiliano)
1969     * GP: more GP hits
1970     * The default sorting cryterium is "TOF+CAL".
1971     *
1972     * The total number of physical tracks is always given by GetNTracks() and the it-th physical track can be retrieved by means of the methods GetTrack(int it) and GetTrack(int it, TString how).
1973     *
1974     * New version, with handling of extended tracks and nuclei tracks.
1975     */
1976    void PamLevel2::SortTracksNew() {
1977    
1978      //--------------------------------------------------
1979      //Check if the current event has already been sorted
1980      //--------------------------------------------------
1981      if (issorted_new && lastsorted_new == GetReadEntry()) {
1982          return; //already done for this event
1983      }
1984    
1985    
1986    //  cout << "SORT" << endl;
1987    
1988      //Reset the sort flags, just in case something will go wrong...
1989      issorted_new = false;
1990      lastsorted_new = -1;
1991    
1992      //--------------------------------------------------
1993      // set input variables
1994      //--------------------------------------------------
1995    
1996      TString how = howtosort;
1997      //Save current Object count
1998      Int_t ObjectNumber = TProcessID::GetObjectCount();
1999    
2000    
2001    
2002    
2003      TrkLevel2  * trk2 ;
2004      CaloLevel2 * calo2;
2005      ToFLevel2  * tof2  ;
2006      OrbitalInfo  * orb2 ;
2007      
2008      TClonesArray * trkext ;
2009      TClonesArray * caloext;
2010      TClonesArray * tofext ;
2011      TClonesArray * orbext ;
2012    
2013    
2014    //   cout << "trk2_obj" << trk2_obj<< endl;
2015    //   cout << "trk2_nuc_obj" << trk2_nuc_obj<< endl;
2016    //   cout << " trk_ext_obj "<<trk_ext_obj<< endl;
2017    //   cout << " trk_ext_nuc_obj "<<trk_ext_nuc_obj<< endl;
2018    
2019      //-----------------------------------------------------------
2020      // create/reset TCloneArrays to store tracks and their images
2021      //-----------------------------------------------------------
2022    
2023    //  cout << " PamLevel2::SortTracksNew() --- Clear TClonesArray objects"<<endl;
2024      
2025      // main tracks from standard alg
2026    //   if (!tsorted)
2027    //       tsorted = new TClonesArray("PamTrack", trk2_obj->GetNTracks());
2028    //   tsorted->Clear("C+C");//Delete();
2029    //   // track images from standard alg
2030    //   if (!timage)
2031    //       timage = new TClonesArray("PamTrack", trk2_obj->GetNTracks());
2032    //   timage->Clear("C+C");//Delete();
2033    //   // tracks from extended algorythm
2034    //   if(EXT && !text)
2035    //       text = new TClonesArray("PamTrack",trk_ext_obj->GetEntries());
2036    //   if(text)text->Clear("C+C");//Delete();
2037    
2038      if(tsorted)delete tsorted;
2039      if(timage) delete timage;
2040      if(text)   delete text;
2041      tsorted = new TClonesArray("PamTrack", trk2_obj->GetNTracks());
2042      timage = new TClonesArray("PamTrack", trk2_obj->GetNTracks());
2043      text = new TClonesArray("PamTrack",trk_ext_obj->GetEntries());
2044    
2045      //-----------------------------------------------------------
2046      // create/reset TCloneArrays to store tracks and their images
2047      //-----------------------------------------------------------
2048      if(NUC){
2049    
2050          
2051          if(tsorted_nuc)delete tsorted_nuc;
2052          if(timage_nuc) delete timage_nuc;
2053          if(text_nuc)   delete text_nuc;
2054          tsorted_nuc = new TClonesArray("PamTrack", trk2_nuc_obj->GetNTracks());
2055          timage_nuc = new TClonesArray("PamTrack", trk2_nuc_obj->GetNTracks());
2056          text_nuc = new TClonesArray("PamTrack",trk_ext_nuc_obj->GetEntries());
2057    
2058      // main tracks from standard alg
2059    //       if (!tsorted_nuc)
2060    //        tsorted_nuc = new TClonesArray("PamTrack", trk2_nuc_obj->GetNTracks());
2061    //       tsorted_nuc->Clear("C+C");//Delete();
2062    //       // track images from standard alg
2063    //       if (!timage_nuc)
2064    //        timage_nuc = new TClonesArray("PamTrack", trk2_nuc_obj->GetNTracks());
2065    //       timage_nuc->Clear("C+C");//Delete();
2066    //       // tracks from extended algorythm
2067    //       if(EXT && !text_nuc)
2068    //        text_nuc = new TClonesArray("PamTrack",trk_ext_nuc_obj->GetEntries());
2069    //       if(text_nuc)text_nuc->Clear("C+C");//Delete();
2070    
2071      }
2072      //--------------------------------------------------
2073      // retrieve sorting method
2074      //--------------------------------------------------
2075      Bool_t use_TRK = how.Contains("TRK", TString::kIgnoreCase);
2076      Bool_t use_CAL = how.Contains("CAL", TString::kIgnoreCase);
2077      Bool_t use_TOF = how.Contains("TOF", TString::kIgnoreCase);
2078      Bool_t use_S1 = how.Contains("S1", TString::kIgnoreCase);
2079      Bool_t use_S2 = how.Contains("S2", TString::kIgnoreCase);
2080      Bool_t use_S3 = how.Contains("S3", TString::kIgnoreCase);
2081      Bool_t use_GP = how.Contains("GP", TString::kIgnoreCase);
2082    
2083      if (use_TOF) {
2084        use_S1 = true;
2085        use_S2 = true;
2086        use_S3 = true;
2087      };
2088      if (!CAL2 && use_CAL)
2089        use_CAL = false;
2090      if (!TOF) {
2091        use_TOF = false;
2092        use_S1 = false;
2093        use_S2 = false;
2094        use_S3 = false;
2095      }
2096      if (!GP) {
2097        use_GP = false;
2098      }
2099    
2100      if (!TRK2) {
2101        cout << "SortTracks() : without tracker does not work!!! (not yet)" << endl;
2102        return;
2103      };
2104    
2105    
2106      ///////////////////////////////////////////////////////////////////////////////////
2107      //
2108      //   sort tracks and fill PamTrack arrays
2109      //
2110      ///////////////////////////////////////////////////////////////////////////////////
2111      for(int doit=0; doit<2; doit++){
2112    
2113    //       cout << "doit "<<doit<<endl;
2114    
2115    
2116          if(doit == 0){
2117    
2118              trk2  = trk2_obj;
2119              calo2 = calo2_obj;
2120              tof2  = tof2_obj;
2121              orb2  = orb2_obj;
2122          
2123              trkext = trk_ext_obj;
2124              caloext = calo_ext_obj;
2125              tofext = tof_ext_obj;
2126              orbext = orb_ext_obj;
2127        
2128          
2129          
2130          
2131    
2132          }else if (doit == 1){
2133    
2134              if(!NUC)break;
2135    
2136          
2137              trk2  = trk2_nuc_obj;
2138              calo2 = calo2_nuc_obj;
2139              tof2  = tof2_nuc_obj;
2140              orb2  = orb2_nuc_obj;
2141          
2142              trkext = trk_ext_nuc_obj;
2143              caloext = calo_ext_nuc_obj;
2144              tofext = tof_ext_nuc_obj;
2145              orbext = orb_ext_nuc_obj;
2146          
2147          
2148          
2149    
2150          }
2151    
2152    //       cout << "trk2" << trk2<<endl;
2153    //       cout << "calo2" << calo2<<endl;
2154    //       cout << "tof2" << tof2<<endl;
2155    //       cout << "orb2" << orb2<<endl;
2156    //       cout << "trkext" <<trkext <<endl;
2157    //       cout << "tofext" << tofext<<endl;
2158    //       cout << "caloext" << caloext<<endl;
2159    //       cout << "orbext" << orbext<<endl;
2160    
2161          TClonesArray &ttext    = (doit==0 ? *text : *text_nuc);
2162          TClonesArray &ttimage  = (doit==0 ? *timage : *timage_nuc);
2163          TClonesArray &ttsorted = (doit==0 ? *tsorted : *tsorted_nuc);
2164      
2165    //       cout << "tsorted + timage "<<doit<<endl;
2166    
2167          //--------------------------------------------------
2168          // loop over "physical" tracks sorted by the tracker
2169          //--------------------------------------------------
2170          for (Int_t i = 0; i < trk2->TrkLevel2::GetNTracks(); i++) {
2171    
2172              TrkTrack *ts = 0;
2173              CaloTrkVar *cs = 0;
2174              ToFTrkVar *os = 0;
2175              OrbitalInfoTrkVar *rs = 0;
2176    
2177              // get tracker tracks
2178              TrkTrack *tp = trk2->GetTrack(i); //tracker
2179              CaloTrkVar *cp = calo2->GetCaloStoredTrack(tp->GetSeqNo());
2180              ToFTrkVar *op = tof2->GetToFStoredTrack(tp->GetSeqNo());
2181              OrbitalInfoTrkVar *rp = orb2->GetOrbitalInfoStoredTrack(tp->GetSeqNo());
2182    
2183              TrkTrack *ti = 0; //tracker (image)
2184              CaloTrkVar *ci = 0;
2185              ToFTrkVar *oi = 0;
2186              OrbitalInfoTrkVar *ri = 0;
2187              //    cout << "trk track n. "<<i << " "<<hex<< tp <<dec<< endl;
2188              // if track has an image, check image selection
2189    
2190              Int_t tp_score = 0; //main track sorted by the tracker
2191              Int_t ti_score = 0; //image track
2192              Int_t totp_score = 0; //main track sorted by the tracker
2193              Int_t toti_score = 0; //image track
2194    
2195              if (tp->HasImage()) {
2196    
2197                  ti = trk2->GetTrackImage(i); //tracker (image)
2198                  ci = calo2->GetCaloStoredTrack(ti->GetSeqNo());
2199                  oi = tof2->GetToFStoredTrack(ti->GetSeqNo());
2200                  ri = orb2->GetOrbitalInfoStoredTrack(ti->GetSeqNo());
2201    
2202                  //            cout << "its image "<<i << " "<<hex<< ti <<dec<< endl;
2203    
2204                  //assign starting scores
2205                  tp_score = 0; //main track sorted by the tracker
2206                  ti_score = 0; //image track
2207    
2208                  // -----------------------------------------------------------------------------------------
2209                  // *****************************************************************************************
2210                  // -----------------------------------------------------------------------------------------
2211                  // calorimeter check
2212                  // -----------------------------------------------------------------------------------------
2213                  if (use_CAL && !calo2) {
2214                      cout << "void PamLevel2::SortTracks(): howtosort= " << how << " but CaloLevel2 not loaded !!!";
2215                      return;
2216                  };
2217                  if (use_CAL && !cp && ci) {
2218                      ti_score++;
2219                      toti_score++;
2220                  };
2221                  if (use_CAL && cp && !ci) {
2222                      tp_score++;
2223                      totp_score++;
2224                  };
2225                  if (use_CAL && cp && ci && true) {
2226    
2227                      if (cp->npresh > ci->npresh && true) {
2228                          tp_score++;
2229                          totp_score++;
2230                      };
2231                      if (cp->npresh < ci->npresh && true) {
2232                          ti_score++;
2233                          toti_score++;
2234                      };
2235    
2236                      //    cout << "CALO "<<tp_score<<ti_score<<endl;
2237    
2238                  };
2239                  // -----------------------------------------------------------------------------------------
2240                  // *****************************************************************************************
2241                  // -----------------------------------------------------------------------------------------
2242                  // TOF check
2243                  // -----------------------------------------------------------------------------------------
2244                  // check the number of hit pmts along the track
2245                  // on S12 S21 and S32, where paddles are parallel to Y axis
2246                  if ((use_TOF || use_S1 || use_S2 || use_S3) && !tof2) {
2247                      cout << "void PamLevel2::SortTracks(): howtosort= " << how << " but ToFLevel2 not loaded !!!";
2248                      return;
2249                  };
2250                  //
2251                  if ((use_TOF || use_S1 || use_S2 || use_S3) && !op && oi) {
2252                      ti_score++;
2253                      toti_score++;
2254                  };
2255                  if ((use_TOF || use_S1 || use_S2 || use_S3) && op && !oi) {
2256                      tp_score++;
2257                      totp_score++;
2258                  };
2259                  if ((use_TOF || use_S1 || use_S2 || use_S3) && op && oi) {
2260                      //
2261                      Float_t sen = 0.;
2262                      for (Int_t ih = 0; ih < op->npmtadc; ih++) {
2263                          Int_t pl = tof2->GetPlaneIndex((op->pmtadc).At(ih));
2264                          if (pl == 2 || pl == 3 || pl == 4 || pl == 5)
2265                              sen += (op->dedx).At(ih);
2266                      };
2267                      for (Int_t ih = 0; ih < oi->npmtadc; ih++) {
2268                          Int_t pl = tof2->GetPlaneIndex((oi->pmtadc).At(ih));
2269                          if (pl == 2 || pl == 3 || pl == 4 || pl == 5)
2270                              sen += (oi->dedx).At(ih);
2271                      };
2272                      //
2273                      if (sen >= sortthr && false) { // temporary disabled NUCLEI special algorithm since the new one should work for every particle (to be checked!)
2274                          //printf(" IS A NUCLEUS! en = %f \n",sen);
2275                          //
2276                          // is a nucleus use a different algorithm
2277                          //
2278                          Int_t nz = 6;
2279                          Float_t zin[6]; // << define TOF z-coordinates
2280                          for (Int_t ip = 0; ip < nz; ip++)
2281                              zin[ip] = tof2->GetZTOF(tof2->GetToFPlaneID(ip)); // << read ToF plane z-coordinates
2282                          Trajectory *tr = new Trajectory(nz, zin);
2283                          //
2284                          Int_t nphit_p = 0;
2285                          Int_t nphit_i = 0;
2286                          Float_t enhit_p = 0.;
2287                          Float_t enhit_i = 0.;
2288                          //
2289                          for (Int_t ih = 0; ih < op->npmtadc; ih++) {
2290                              Int_t pl = tof2->GetPlaneIndex((op->pmtadc).At(ih));
2291                              if (pl == 1 || pl == 2 || pl == 5) {
2292                                  nphit_p++;
2293                                  enhit_p += (op->dedx).At(ih);
2294                              };
2295                          };
2296                          //
2297                          tp->DoTrack2(tr);
2298                          //
2299                          if (fabs(tr->y[0] - oi->ytofpos[0]) < 2.) {
2300                              for (Int_t ih = 0; ih < op->npmtadc; ih++) {
2301                                  Int_t pl = tof2->GetPlaneIndex((op->pmtadc).At(ih));
2302                                  if (pl == 0) {
2303                                      nphit_p++;
2304                                      enhit_p += (op->dedx).At(ih);
2305                                  };
2306                              };
2307                          };
2308                          if (fabs(tr->y[3] - oi->ytofpos[1]) < 2.) {
2309                              for (Int_t ih = 0; ih < op->npmtadc; ih++) {
2310                                  Int_t pl = tof2->GetPlaneIndex((op->pmtadc).At(ih));
2311                                  if (pl == 3) {
2312                                      nphit_p++;
2313                                      enhit_p += (op->dedx).At(ih);
2314                                  };
2315                              };
2316                          };
2317                          if (fabs(tr->y[4] - oi->ytofpos[2]) < 2.) {
2318                              for (Int_t ih = 0; ih < op->npmtadc; ih++) {
2319                                  Int_t pl = tof2->GetPlaneIndex((op->pmtadc).At(ih));
2320                                  if (pl == 4) {
2321                                      nphit_p++;
2322                                      enhit_p += (op->dedx).At(ih);
2323                                  };
2324                              };
2325                          };
2326    
2327                          for (Int_t ih = 0; ih < oi->npmtadc; ih++) {
2328                              Int_t pl = tof2->GetPlaneIndex((oi->pmtadc).At(ih));
2329                              if (pl == 1 || pl == 2 || pl == 5) {
2330                                  nphit_i++;
2331                                  enhit_i += (op->dedx).At(ih);
2332                              };
2333                          };
2334                          //
2335                          ti->DoTrack2(tr);
2336                          //
2337                          if (fabs(tr->y[0] - oi->ytofpos[0]) < 2.) {
2338                              for (Int_t ih = 0; ih < oi->npmtadc; ih++) {
2339                                  Int_t pl = tof2->GetPlaneIndex((oi->pmtadc).At(ih));
2340                                  if (pl == 0) {
2341                                      nphit_i++;
2342                                      enhit_i += (op->dedx).At(ih);
2343                                  };
2344                              };
2345                          };
2346                          if (fabs(tr->y[3] - oi->ytofpos[1]) < 2.) {
2347                              for (Int_t ih = 0; ih < oi->npmtadc; ih++) {
2348                                  Int_t pl = tof2->GetPlaneIndex((oi->pmtadc).At(ih));
2349                                  if (pl == 3) {
2350                                      nphit_i++;
2351                                      enhit_i += (op->dedx).At(ih);
2352                                  };
2353                              };
2354                          };
2355                          if (fabs(tr->y[4] - oi->ytofpos[2]) < 2.) {
2356                              for (Int_t ih = 0; ih < oi->npmtadc; ih++) {
2357                                  Int_t pl = tof2->GetPlaneIndex((oi->pmtadc).At(ih));
2358                                  if (pl == 4) {
2359                                      nphit_i++;
2360                                      enhit_i += (op->dedx).At(ih);
2361                                  };
2362                              };
2363                          };
2364    
2365                          if ((use_TOF || use_S1 || use_S2 || use_S3) && (nphit_p + nphit_i) != 0 && true) {
2366    
2367                              //        printf(" seqno %i nphit_p %i nphit_i %i enhit_p %f enhit_i %f \n",trk2_obj->TrkLevel2::GetSeqNo(i),nphit_p,nphit_i,enhit_p,enhit_i);
2368                              //        printf(" score p %i score i %i \n",tp_score,ti_score);
2369                              //              if( enhit_p > enhit_i ) tp_score++;
2370                              //              if( nphit_p >= nphit_i && enhit_p > enhit_i ) tp_score++;
2371                              if (nphit_p > nphit_i)
2372                                  tp_score++;
2373                              if (nphit_p < nphit_i)
2374                                  ti_score++;
2375                              if (nphit_p == nphit_i) {
2376                                  if (enhit_p > enhit_i)
2377                                      tp_score++;
2378                                  else
2379                                      ti_score++;
2380                              };
2381                              //        printf(" dopo score p %i score i %i \n",tp_score,ti_score);
2382                          };
2383                          delete tr;
2384                          //
2385                      }
2386                      else {
2387                          // -------------
2388                          // NOT a NUCLEUS
2389                          // -------------
2390                          //printf(" NOT a NUCLEUS! en = %f \n",sen);
2391    
2392                          Int_t nphit_p = 0;
2393                          Int_t nphit_i = 0;
2394    
2395                          /*                                cout << "track: npmtadc "<< op->npmtadc << endl;
2396                            cout << "track: npmttdc "<< op->npmttdc << endl;
2397                            cout << "image: npmtadc "<< oi->npmtadc << endl;
2398                            cout << "image: npmttdc "<< oi->npmttdc << endl;*/
2399    
2400                          //          for (Int_t ih=0; ih < op->npmtadc; ih++){
2401                          //            Int_t pl = tof2_obj->GetPlaneIndex( (op->pmtadc).At(ih) );
2402                          //            if(pl == 1 || pl == 2 || pl == 5)nphit_p++;
2403                          //          };
2404    
2405                          //          for (Int_t ih=0; ih < oi->npmtadc; ih++){
2406                          //            Int_t pl = tof2_obj->GetPlaneIndex( (oi->pmtadc).At(ih) );
2407                          //            if(pl == 1 || pl == 2 || pl == 5)nphit_i++;
2408                          //          };
2409                          // --- modified to count tdc signals (more efficient?)
2410                          // --- and to implement check on tdcflag
2411                          for (Int_t ih = 0; ih < op->npmttdc; ih++) {
2412                              Int_t pl = tof2->GetPlaneIndex((op->pmttdc).At(ih));
2413                              //        if( (op->tdcflag).At(ih)==0 && (pl == 1 || pl == 2 || pl == 5) )nphit_p++;
2414                              if ((use_S1 && (pl == 0 || pl == 1)) || (use_S2 && (pl == 2 || pl == 3))
2415                                  || (use_S3 && (pl == 4 || pl == 5))) {
2416                                  if ((op->tdcflag).At(ih) == 0)
2417                                      nphit_p++;
2418                              };
2419                          };
2420    
2421                          for (Int_t ih = 0; ih < oi->npmttdc; ih++) {
2422                              Int_t pl = tof2->GetPlaneIndex((oi->pmttdc).At(ih));
2423                              //        if( (oi->tdcflag).At(ih)==0 && (pl == 1 || pl == 2 || pl == 5) )nphit_i++;
2424                              if ((use_S1 && (pl == 0 || pl == 1)) || (use_S2 && (pl == 2 || pl == 3))
2425                                  || (use_S3 && (pl == 4 || pl == 5))) {
2426                                  if ((oi->tdcflag).At(ih) == 0)
2427                                      nphit_i++;
2428                              };
2429                          };
2430    
2431                          if ((nphit_p + nphit_i) != 0 && true) {
2432    
2433                              if (nphit_p != nphit_i) {
2434                                  totp_score += nphit_p;
2435                                  toti_score += nphit_i;
2436                                  tp_score += nphit_p;
2437                                  ti_score += nphit_i;
2438                              };
2439                              //        if     ( nphit_p > nphit_i) tp_score+=nphit_p;
2440                              //        else if( nphit_p < nphit_i) ti_score+=nphit_i;
2441                              //        else ;//niente
2442                          };
2443                      };
2444                      //    cout << "TOF "<<tp_score<<ti_score<<endl;
2445                  };
2446    
2447                  //      if(tp_score == ti_score) use_TRK = true;
2448    
2449    
2450                  // -----------------------------------------------------------------------------------------
2451                  // *****************************************************************************************
2452                  // -----------------------------------------------------------------------------------------
2453                  // tracker check
2454                  // -----------------------------------------------------------------------------------------
2455                  // chi**2 difference is not always large enough to distinguish among
2456                  // the real track and its image.
2457                  // Tracker check will be applied always when calorimeter and tof information is ambiguous.
2458                  // *** MODIFIED ON AUGUST 2007 ***
2459                  if (use_TRK) {
2460                      //    if(      tp->chi2 > 0 && tp->chi2 < ti->chi2 ) tp_score++ ;
2461                      //    else if( ti->chi2 > 0 && ti->chi2 < tp->chi2 ) ti_score++ ;
2462    
2463                      // CHECK 1 : number of points along X
2464                      if (tp->GetNX() >= ti->GetNX()) {
2465                          tp_score++;
2466                          totp_score++;
2467                      };
2468                      if (tp->GetNX() <= ti->GetNX()) {
2469                          ti_score++;
2470                          toti_score++;
2471                      };
2472                      // CHECK 2 : number of points along Y
2473                      if (tp->GetNY() >= ti->GetNY()) {
2474                          tp_score++;
2475                          totp_score++;
2476                      };
2477                      if (tp->GetNY() <= ti->GetNY()) {
2478                          ti_score++;
2479                          toti_score++;
2480                      };
2481    
2482                      //    cout << "TRK "<<tp_score<<ti_score<<endl;
2483                  };
2484    
2485                  // -----------------------------------------------------------------------------------------
2486                  // *****************************************************************************************
2487                  // -----------------------------------------------------------------------------------------
2488                  // GPamela check
2489                  // -----------------------------------------------------------------------------------------
2490    
2491                  //---------------------------------------------------
2492                  // count the number of GP hits
2493                  //---------------------------------------------------
2494                  if (use_GP) {
2495                      int ngphits_p = 0;
2496                      int ngphits_i = 0;
2497                      float toll = 0.02; //200 micron
2498                      for (int ih = 0; ih < GetGPamela()->Nthspe; ih++) {
2499                          int ip = (Int_t) GetGPamela()->Itrpb[ih] - 1;
2500                          if (tp && tp->YGood(ip) && fabs(tp->ym[ip] - GetGPamela()->Yavspe[ih]) < toll && true)
2501                              ngphits_p++;
2502                          if (ti && ti->YGood(ip) && fabs(ti->ym[ip] - GetGPamela()->Yavspe[ih]) < toll && true)
2503                              ngphits_i++;
2504                      }
2505                      if (ngphits_p > ngphits_i && true) {
2506                          tp_score++;
2507                          totp_score++;
2508                      }
2509                      if (ngphits_p < ngphits_i && true) {
2510                          ti_score++;
2511                          toti_score++;
2512                      }
2513                  }
2514    
2515                  // *-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*
2516                  // the winner is....
2517                  // *-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*
2518                  if (tp_score > ti_score) {
2519    
2520                  }
2521                  else if (tp_score < ti_score) {
2522    
2523                      ts = ti;//its image!!
2524                      cs = ci;
2525                      os = oi;
2526                      rs = ri;
2527                      Int_t totis = toti_score;
2528    
2529                      ti = tp;//its image!!
2530                      ci = cp;
2531                      oi = op;
2532                      ri = rp;
2533    
2534                      tp = ts;//its image!!
2535                      cp = cs;
2536                      op = os;
2537                      rp = rs;
2538    
2539                      toti_score = totp_score;
2540                      totp_score = totis;
2541    
2542                  }
2543                  else {
2544    
2545                      //    cout << "Warning - track image ambiguity not solved" << endl;
2546    
2547                  };
2548    
2549              }
2550              else {
2551                  totp_score = 1;
2552                  toti_score = 0;
2553    
2554                  //            ts = tp;
2555                  //            cs = cp;
2556                  //            os = op;
2557              };
2558    
2559              //    cout <<" SortTracks() "<<i<<" -- "<<ts<<endl;
2560              //    sorted_tracks->Add(ts);//save the track in the sorted array
2561              //    sorted_tracks.Add(ts);//save the track in the sorted array
2562              //    sorted_tracks.Add(tp);//save the track in the sorted array
2563              //    cout << "SortTracks:: sorted_tracks->Add(it) "<<i<<" "<<ts<<endl;
2564              //    cout<<"o "<<tp<<endl;
2565              //    cout<<"o "<<cp<<endl;
2566              //    cout<<"o "<<op<<endl;
2567    
2568              new (ttsorted[i]) PamTrack(tp, cp, op, rp);
2569              new (ttimage[i]) PamTrack(ti, ci, oi, ri);
2570    
2571              ((PamTrack*) (ttsorted[i]))->SetPScore(totp_score);
2572              ((PamTrack*) (ttsorted[i]))->SetIScore(toti_score);
2573              ((PamTrack*) (ttimage[i]))->SetPScore(totp_score);
2574              ((PamTrack*) (ttimage[i]))->SetIScore(toti_score);
2575          };
2576    
2577    
2578    
2579    
2580    
2581      // loop over the tracks sorted by the tracker  //   if (tsorted->GetEntries() != trk2->GetNTracks()) {
2582      Bool_t use_TRK = how.Contains("TRK", TString::kIgnoreCase);  //     cout << "void PamLevel2::SortTracks(): tsorted->GetEntries() " << tsorted->GetEntries()
2583      Bool_t use_CAL = how.Contains("CAL", TString::kIgnoreCase);  //         << " != trk2->GetNTracks() = " << trk2->GetNTracks() << endl;
2584      Bool_t use_TOF = how.Contains("TOF", TString::kIgnoreCase);  //     tsorted->Delete();
2585        //     tsorted = 0;
2586      if( !CAL2 &&  use_CAL) use_CAL = false;  //     timage->Delete();
2587      if( !TOF &&  use_TOF) use_TOF = false;  //     timage = 0;
2588        //   }
2589      if( !TRK2 ){  
2590  //      cout << "SortTracks() : without tracker does not work!!! (not yet)" << endl;  
2591          return;  //       cout << "text "<<doit<<endl;
2592      };  
2593    
2594          //--------------------------------------------------
2595          // fill array with extended tracks (this is easy...)
2596          //--------------------------------------------------
2597          if(EXT){
2598              for(int it=0; it<trkext->GetEntries(); it++){
2599                  
2600                  new (ttext[it]) PamTrack((ExtTrack*)(*trkext)[it], (CaloTrkVar*)(*caloext)[it], (ToFTrkVar*)(*tofext)[it], (OrbitalInfoTrkVar*)(*orbext)[it]);
2601                  
2602              }
2603          }
2604          
2605    
     //   cout << "use_CAL "<<use_CAL<<" use_TOF "<<use_TOF<<" use_TRK "<<use_TRK <<endl;  
       
     for(Int_t i=0; i < trk2_obj->TrkLevel2::GetNTracks(); i++){  
           
         TrkTrack   *ts = 0;  
         CaloTrkVar *cs = 0;  
         ToFTrkVar  *os = 0;  
           
         // get tracker tracks  
         TrkTrack   *tp = trk2_obj->TrkLevel2::GetTrack(i);                    //tracker  
         CaloTrkVar *cp = GetCaloStoredTrack(tp->GetSeqNo());  
         ToFTrkVar  *op = GetToFStoredTrack(tp->GetSeqNo());  
   
         TrkTrack   *ti = 0;              //tracker (image)  
         CaloTrkVar *ci = 0;  
         ToFTrkVar  *oi = 0;  
 //      cout << "trk track n. "<<i << " "<<hex<< tp <<dec<< endl;  
         // if track has an image, check image selection  
         if(tp->HasImage()){  
               
             ti = trk2_obj->TrkLevel2::GetTrackImage(i);              //tracker (image)  
             ci = GetCaloStoredTrack(ti->GetSeqNo());  
             oi = GetToFStoredTrack(ti->GetSeqNo());  
               
 //          cout << "its image "<<i << " "<<hex<< ti <<dec<< endl;  
2606    
2607              //assign starting scores    };
             Int_t tp_score = 0;  //main track sorted by the tracker  
             Int_t ti_score = 0;  //image track  
               
             // ------------------------  
             // calorimeter check  
             // ------------------------  
             // check the Y spatial residual on the first calorimeter plane  
             // (cut on calorimeter variables from Emiliano)  
             if( use_CAL && !calo2_obj ){  
                 cout << "void PamLevel2::SortTracks(TString how): how= "<<how<<" but CaloLevel2 not loaded !!!";  
                 return;  
             };  
             if(  
                 use_CAL            &&  
                 calo2_obj->npcfit[1] > 15     &&   //no. of fit planes on Y view  
                 calo2_obj->varcfit[1] < 1000. &&  //fit variance on Y view  
                 cp && ci &&  
                 true){  
2608    
                   
                 Float_t resy_p = cp->tbar[0][1] - calo2_obj->cbar[0][1]; if(resy_p < 0)resy_p= - resy_p;  
                 Float_t resy_i = ci->tbar[0][1] - calo2_obj->cbar[0][1]; if(resy_i < 0)resy_i= - resy_i;  
                   
                 if(resy_p <= resy_i) tp_score++;  
                 else                 ti_score++;  
2609    
2610  //              cout << "CALO "<<tp_score<<ti_score<<endl;    //Restore Object count
2611      //To save space in the table keeping track of all referenced objects
2612      //We reset the object count to what it was at the beginning of the event.
2613      TProcessID::SetObjectCount(ObjectNumber);
2614    
2615      //Everything went fine so the current event can be tagged as sorted
2616      issorted_new = true;
2617      lastsorted_new = GetReadEntry();
2618    
2619    //   cout << " tsorted "<< tsorted << " "<<(tsorted ? tsorted->GetEntries() : 0)<<endl;
2620    //   cout << " timage  "<< timage  << " "<<(timage  ? timage->GetEntries() : 0)<<endl;
2621    //   cout << " text    "<< text    << " "<<(text    ? text->GetEntries() : 0)<<endl;
2622    
             };  
             // ------------------------  
             // TOF check  
             // ------------------------      
             // check the number of hit pmts along the track  
             // on S12 S21 and S32, where paddles are parallel to Y axis  
             if( use_TOF && !tof_obj ){  
                 cout << "void PamLevel2::SortTracks(TString how): how= "<<how<<" but ToFLevel2 not loaded !!!";  
                 return;  
             };  
             if( use_TOF && op && oi ){  
                   
                 Int_t nphit_p =0;  
                 Int_t nphit_i =0;  
                   
                   
 /*                              cout << "track: npmtadc "<< op->npmtadc << endl;  
                                 cout << "track: npmttdc "<< op->npmttdc << endl;  
                                 cout << "image: npmtadc "<< oi->npmtadc << endl;  
                                 cout << "image: npmttdc "<< oi->npmttdc << endl;*/  
                   
                 for (Int_t ih=0; ih < op->npmtadc; ih++){  
                     Int_t pl = tof_obj->GetPlaneIndex( (op->pmtadc).At(ih) );  
                     if(pl == 1 || pl == 2 || pl == 5)nphit_p++;  
                 };  
                   
                 for (Int_t ih=0; ih < oi->npmtadc; ih++){  
                     Int_t pl = tof_obj->GetPlaneIndex( (oi->pmtadc).At(ih) );  
                     if(pl == 1 || pl == 2 || pl == 5)nphit_i++;  
                 };  
                   
                 if(  
                     use_TOF            &&  
                     (nphit_p+nphit_i) !=0 &&      
                     true){  
                       
                     if( nphit_p >= nphit_i) tp_score++;  
                     else ti_score++;  
                 };  
 //              cout << "TOF "<<tp_score<<ti_score<<endl;  
             };  
             if(tp_score == ti_score) use_TRK = true;  
             // ------------------------  
             // tracker check  
             // ------------------------  
             // chi**2 difference is not always large enough to distinguish among  
             // the real track and its image.  
             // Tracker check will be applied always when calorimeter and tof information is ambiguous.  
             if(use_TRK){  
                 if(      tp->chi2 > 0 && tp->chi2 < ti->chi2 ) tp_score++ ;  
                 else if( ti->chi2 > 0 && ti->chi2 < tp->chi2 ) ti_score++ ;  
 //              cout << "TRK "<<tp_score<<ti_score<<endl;  
             };  
               
             // ------------------------  
             // the winner is....  
             // ------------------------      
             if      (tp_score > ti_score) {  
 //              ts = tp;//the track sorted by the tracker!!  
 //              cs = cp;  
 //              os = op;  
             }else if (tp_score < ti_score) {  
                 ts = ti;//its image!!  
                 cs = ci;  
                 os = oi;  
   
                 ti = tp;//its image!!  
                 ci = cp;  
                 oi = op;  
   
                 tp = ts;//its image!!  
                 cp = cs;  
                 op = os;  
2623    
                   
             }else {  
 //              ts = tp;  
 //              cs = cp;  
 //              os = op;  
 //                              cout << "Warning - track image ambiguity not solved" << endl;  
 //                              cout << ts->GetNtot() << " "<< ts->chi2 << " " << npcfit[1] << " "<< nphit_p << endl;  
             };  
               
         }else{  
 //          ts = tp;  
 //          cs = cp;  
 //          os = op;  
         };  
           
 //      cout <<" SortTracks() "<<i<<" -- "<<ts<<endl;  
 //      sorted_tracks->Add(ts);//save the track in the sorted array  
 //      sorted_tracks.Add(ts);//save the track in the sorted array  
 //      sorted_tracks.Add(tp);//save the track in the sorted array  
 //      cout << "SortTracks:: sorted_tracks->Add(it) "<<i<<" "<<ts<<endl;  
 //      cout<<"o "<<tp<<endl;  
 //      cout<<"o "<<cp<<endl;  
 //      cout<<"o "<<op<<endl;  
         new(ttsorted[i]) PamTrack(tp,cp,op);  
         new(ttimage[i])  PamTrack(ti,ci,oi);  
     };  
   
     if( tsorted->GetEntries() != trk2_obj->GetNTracks() ){  
         cout << "void PamLevel2::SortTracks(TString how): tsorted->GetEntries() "<<tsorted->GetEntries()<<" != trk2_obj->GetNTracks() = "<<trk2_obj->GetNTracks() <<endl;  
         tsorted->Delete(); tsorted=0;  
         timage->Delete(); timage=0;      
     }  
   
     //Restore Object count  
     //To save space in the table keeping track of all referenced objects  
     //We reset the object count to what it was at the beginning of the event.  
     TProcessID::SetObjectCount(ObjectNumber);  
       
2624  };  };
2625  //--------------------------------------  //--------------------------------------
2626  //  //
# Line 692  void PamLevel2::SortTracks(TString how){ Line 2630  void PamLevel2::SortTracks(TString how){
2630   * This method overrides TrkLevel2::GetTracks(), where sorting is done by decreasing number of fit points and increasing chi^2.   * This method overrides TrkLevel2::GetTracks(), where sorting is done by decreasing number of fit points and increasing chi^2.
2631   * PamLevel2::GetTracks() keeps the same track order given by TrkLevel2::GetTracks(), but checks image selection by using calorimeter and ToF tracking information.   * PamLevel2::GetTracks() keeps the same track order given by TrkLevel2::GetTracks(), but checks image selection by using calorimeter and ToF tracking information.
2632   */   */
2633    
2634  // TRefArray *PamLevel2::GetTracks(){  // TRefArray *PamLevel2::GetTracks(){
2635    
2636  // //  *-*-*-*-*-*-*-*-*-*-*-*-*  // //  *-*-*-*-*-*-*-*-*-*-*-*-*
# Line 700  void PamLevel2::SortTracks(TString how){ Line 2639  void PamLevel2::SortTracks(TString how){
2639    
2640  // //   return  sorted_tracks;  // //   return  sorted_tracks;
2641  //     return &sorted_tracks;  //     return &sorted_tracks;
2642        
2643  //  };  //  };
 TClonesArray *PamLevel2::GetTracks(){  
2644    
 //  *-*-*-*-*-*-*-*-*-*-*-*-*  
     SortTracks("+CAL+TOF");  
 //  *-*-*-*-*-*-*-*-*-*-*-*-*  
2645    
     return tsorted;  
       
  };  
2646  //--------------------------------------  //--------------------------------------
2647   //  //
2648   //  //
2649  //--------------------------------------  //--------------------------------------
2650    
2651  /**  /**
2652   * Retrieves the it-th Pamela "physical" track.   * Retrieves the it-th Pamela "physical" track.
2653   * It override TrkLevel2::GetTrack(int it).   * It override TrkLevel2::GetTrack(int it).
2654   * @param it Track number, ranging from 0 to GetNTracks().   * @param it Track number, ranging from 0 to GetNTracks().
2655   */   */
2656  PamTrack *PamLevel2::GetTrack(int it){  PamTrack *PamLevel2::GetTrackOld(int it) {
2657    
2658  //    if(!trk2_obj) return 0;    PamTrack *track = NULL;
2659            
2660  // //  *-*-*-*-*-*-*-*-*-*-*-*-*    //  *-*-*-*-*-*-*-*-*-*-*-*-*
2661  //     SortTracks("+CAL+TOF");    SortTracks();
2662  // //  *-*-*-*-*-*-*-*-*-*-*-*-*    //  *-*-*-*-*-*-*-*-*-*-*-*-*
2663  // //    if(!sorted_tracks)return 0;    if (!tsorted)
2664  //     if(sorted_tracks.IsEmpty())return 0;      return track;
2665      if (!tsorted->GetEntries())
2666        return track;
2667    
2668    
2669      if (it >= 0 && it < trk2_obj->TrkLevel2::GetNTracks()) {
2670        track = (PamTrack*)((*tsorted)[it]);
2671      }
2672      else {
2673        cout << "PamLevel2::GetTrackOld(int) : tracker track SeqNo " << it << " does not exist (GetNTracks() = "
2674            << trk2_obj->TrkLevel2::GetNTracks() << ")" << endl;
2675      };
2676    
2677      return track;
2678    
2679    };
2680    
2681    //PamTrack *PamLevel2::GetTrack(int it) { return GetTrack(it,trkAlg); };
2682    
2683    /**
2684     * Retrieves the it-th Pamela "physical" track.
2685     * It override TrkLevel2::GetTrack(int it).
2686     * @param it Track number, ranging from 0 to GetNTracks().
2687     * @param alg Algorythm, see SetTrakingAlgorythm(char *alg) for explanation.
2688     */
2689    PamTrack *PamLevel2::GetTrack(int it, const char* alg) {
2690    
2691        TString s(alg);
2692        if(!s.CompareTo("") ||!s.CompareTo("STD") )return GetTrackOld(it); //old algorythm
2693    
 //     PamTrack *track = 0;  
       
 //     if( it >=0 && it < trk2_obj->TrkLevel2::GetNTracks() && it<sorted_tracks.GetEntriesFast() ){      
 //      TrkTrack   *t = (TrkTrack*)sorted_tracks.At(it);  
 //      track = GetPamTrackAlong(t);  
 //     }else{  
 //      cout << "PamLevel2::GetTrack(int) : tracker track SeqNo "<< it <<" does not exist (GetNTracks() = "<<trk2_obj->TrkLevel2::GetNTracks()<<")"<<endl;  
 //     };  
       
 //     return track;  
2694    
2695  //    cout << "PamLevel2::GetTrack(int it) "<<endl;      SortTracksNew();
2696  //  *-*-*-*-*-*-*-*-*-*-*-*-*      // >> fill tsorted, timage and text
2697      SortTracks("+CAL+TOF");  
2698  //  *-*-*-*-*-*-*-*-*-*-*-*-*      if ( ( !s.Contains("EXTF", TString::kIgnoreCase) || !EXT )){ //not forced exteded-alg requested (or exteded-data missing)
2699      if(!tsorted)return 0;  
2700      if(!tsorted->GetEntries())return 0;          if( s.Contains("NUC")){
2701                if(
2702                    tsorted_nuc &&
2703                    it < tsorted_nuc->GetEntries() &&                             //enough tracks found
2704                    it >= 0 &&                                                //valid index
2705                    true) return (PamTrack*)((*tsorted_nuc)[it]);                 //ok return the track
2706            }else{
2707                if(
2708                    tsorted &&
2709                    it < tsorted->GetEntries() &&                             //enough tracks found
2710                    it >= 0 &&                                                //valid index
2711                    true )return (PamTrack*)((*tsorted)[it]);                 //ok return the track
2712            }
2713    
2714        }
2715        
2716    
2717      PamTrack *track = 0;      /////////////////////////////////////////////////////////////////////////
2718        /// if requested get track from extended algorythm output
2719        /////////////////////////////////////////////////////////////////////////
2720            
2721      if( it >=0 && it < trk2_obj->TrkLevel2::GetNTracks()){      if(s.Contains("EXT", TString::kIgnoreCase) && EXT){//if exteded-alg requested
 //      TrkTrack   *t = (TrkTrack*)sorted_tracks.At(it);  
 //      track = GetPamTrackAlong(t);  
         TClonesArray &t = *(tsorted);  
         track = (PamTrack*)t[it];  
2722                    
2723      }else{          if(s.Contains("NUC")){
2724          cout << "PamLevel2::GetTrack(int) : tracker track SeqNo "<< it <<" does not exist (GetNTracks() = "<<trk2_obj->TrkLevel2::GetNTracks()<<")"<<endl;              if(
2725                    text_nuc &&
2726                    it < text_nuc->GetEntries() &&                             //enough tracks found
2727                    it >= 0 &&                                                //valid index
2728                    true) return (PamTrack*)((*text_nuc)[it]);
2729            }else{
2730                if(
2731                    text &&
2732                    it < text->GetEntries() &&                             //enough tracks found
2733                    it >= 0 &&                                                //valid index
2734                    true) return (PamTrack*)((*text)[it]);
2735            }
2736    
2737      };      };
2738            
     return track;  
2739            
2740  };      cout << "PamTrack *PamLevel2::GetTrack("<<it<<","<<alg<<") -- wrong track number or unrecognised algorithm"<<endl;
2741        
2742        return NULL;
2743    
2744    }
2745    ;
2746    TClonesArray *PamLevel2::GetTracks() {
2747    
2748      //  *-*-*-*-*-*-*-*-*-*-*-*-*
2749      SortTracks();
2750      //  *-*-*-*-*-*-*-*-*-*-*-*-*
2751    
2752      return tsorted;
2753    
2754    }
2755    ;
2756    Int_t  PamLevel2::GetNTracks(const char* alg) {
2757    
2758    
2759    //    cout << " trk_nuc_obj->GetEntries() "<<trk_nuc_obj->GetEntries()<<" trk2_nuc_obj->GetNTracks() "<<trk2_nuc_obj->GetNTracks()<<endl;
2760    
2761        TString s(alg);
2762    
2763        if(!s.CompareTo("") || !s.CompareTo("STD"))return trk2_obj->TrkLevel2::GetNTracks(); //standard algorythm
2764            
2765        if(s.Contains("EXTF", TString::kIgnoreCase) && EXT){
2766            if(s.Contains("NUC", TString::kIgnoreCase) && NUC)return trk_ext_nuc_obj->GetEntries();//ok
2767            return trk_ext_obj->GetEntries();//ok
2768        }
2769        if( s.Contains("EXT", TString::kIgnoreCase) && EXT) {
2770            if(s.Contains("NUC", TString::kIgnoreCase) && NUC)
2771                return (trk2_nuc_obj->TrkLevel2::GetNTracks() ?  trk2_nuc_obj->TrkLevel2::GetNTracks() :  trk_ext_nuc_obj->GetEntries() );  
2772            return (trk2_obj->TrkLevel2::GetNTracks() ?  trk2_obj->TrkLevel2::GetNTracks() :  trk_ext_obj->GetEntries() );
2773        }
2774        if(s.Contains("NUC", TString::kIgnoreCase) && NUC )
2775            return trk2_nuc_obj->TrkLevel2::GetNTracks();
2776        
2777        cout << "Int_t  PamLevel2::GetNTracks("<<alg<<") -- unrecognised algorithm"<<endl;
2778    
2779        return 0;
2780    
2781    }
2782    
2783    
2784  //--------------------------------------  //--------------------------------------
2785  //  //
2786  //  //
2787  //--------------------------------------  //--------------------------------------
2788  /**  /**
2789   * Retrieves (if present) the image of the it-th Pamela "physical" track, sorted by the method PamLevel2::SortTracks().   * Retrieves (if present) the image of the it-th Pamela "physical" track, sorted by the method PamLevel2::SortTracks().
2790     * @param it Track number, ranging from 0 to GetNTracks().
2791     */
2792    PamTrack *PamLevel2::GetTrackImageOld(int it) {
2793    
2794      //  *-*-*-*-*-*-*-*-*-*-*-*-*
2795      SortTracks();
2796      //  *-*-*-*-*-*-*-*-*-*-*-*-*
2797      if (!timage)
2798        return 0;
2799      if (!timage->GetEntries())
2800        return 0;
2801    
2802      PamTrack *image = 0;
2803    
2804      if (it >= 0 && it < trk2_obj->TrkLevel2::GetNTracks()) {
2805        TClonesArray &t = *(tsorted);
2806        PamTrack *temp = (PamTrack*) t[it];
2807        if (temp->GetTrkTrack()->HasImage()) {
2808          TClonesArray & t = *(timage);
2809          image = (PamTrack*) t[it];
2810        }
2811        else {
2812          //            cout <<"PamLevel2::GetTrackImage(int) : Track SeqNo "<<it<<" does not have image"<<endl;
2813        };
2814      }
2815      else {
2816        cout << "PamLevel2::GetTrackImageOld(int) : Tracker track SeqNo " << it << " does not exist (GetNTracks() = "
2817            << trk2_obj->TrkLevel2::GetNTracks() << ")" << endl;
2818      };
2819    
2820      return image;
2821    }
2822    /**
2823     * Retrieves (if present) the image of the it-th Pamela "physical" track, sorted by the method PamLevel2::SortTracks().
2824   * @param it Track number, ranging from 0 to GetNTracks().   * @param it Track number, ranging from 0 to GetNTracks().
2825     * @param alg Algorythm, see SetTrakingAlgorythm(char *alg) for explanation.
2826   */   */
2827  PamTrack *PamLevel2::GetTrackImage(int it){  PamTrack *PamLevel2::GetTrackImage(int it, const char* alg) {
2828    
2829  //     if(!trk2_obj) return 0;      TString s(alg);
2830        if(!s.CompareTo("") || !s.CompareTo("STD"))return GetTrackImageOld(it); //old algorythm
2831    
 // //  *-*-*-*-*-*-*-*-*-*-*-*-*  
 //     SortTracks("+CAL+TOF");  
 // //  *-*-*-*-*-*-*-*-*-*-*-*-*  
 // //    if(!sorted_tracks)return 0;  
 //     if(sorted_tracks.IsEmpty())return 0;  
       
 //     PamTrack *image = 0;  
       
 //     if( it >=0 && it < trk2_obj->TrkLevel2::GetNTracks() ){  
 //      TrkTrack *temp = (TrkTrack*)sorted_tracks.At(it);  
 //      if( temp->HasImage() ){  
 //          TrkTrack   *t = trk2_obj->TrkLevel2::GetStoredTrack(temp->GetImageSeqNo());  
 //          image = GetPamTrackAlong(t);  
 //      }else{  
 //          cout <<"PamLevel2::GetTrackImage(int) : Track SeqNo "<<it<<" does not have image"<<endl;  
 //      };  
 //     }else{  
 //      cout << "PamLevel2::GetTrackImage(int) : Tracker track SeqNo "<< it <<" does not exist (GetNTracks() = "<<trk2_obj->TrkLevel2::GetNTracks()<<")"<<endl;  
 //     };  
       
 //     return image;  
2832    
2833        SortTracksNew();
2834        // >> fill tsorted, timage and text
2835    
2836  //  *-*-*-*-*-*-*-*-*-*-*-*-*      if ( ( !s.Contains("EXTF", TString::kIgnoreCase) || !EXT )){ //not forced exteded-alg requested (or exteded-data missing)
2837      SortTracks("+CAL+TOF");  
2838  //  *-*-*-*-*-*-*-*-*-*-*-*-*          if( s.Contains("NUC")){
2839      if(!timage)return 0;              if(
2840      if(!timage->GetEntries())return 0;                  tsorted_nuc &&
2841                        it < tsorted_nuc->GetEntries() &&                             //enough tracks found
2842      PamTrack *image = 0;                  it >= 0 &&                                                //valid index
2843                        true){
2844      if( it >=0 && it < trk2_obj->TrkLevel2::GetNTracks() ){                  TClonesArray &t = *(tsorted_nuc);
2845          TClonesArray &t = *(tsorted);                  PamTrack *temp = (PamTrack*) t[it];
2846          PamTrack *temp = (PamTrack*)t[it];                  if (temp->GetTrkTrack()->HasImage()) {
2847          if( temp->GetTrkTrack()->HasImage() ){                      return (PamTrack*)((*timage_nuc)[it]);                 //ok return the track
2848              TClonesArray &t = *(timage);                  }else{
2849              image = (PamTrack*)t[it];                      return NULL;
2850                    }
2851                    
2852                }
2853          }else{          }else{
2854  //          cout <<"PamLevel2::GetTrackImage(int) : Track SeqNo "<<it<<" does not have image"<<endl;              if(
2855          };                  tsorted &&
2856      }else{                  it < tsorted->GetEntries() &&                             //enough tracks found
2857          cout << "PamLevel2::GetTrackImage(int) : Tracker track SeqNo "<< it <<" does not exist (GetNTracks() = "<<trk2_obj->TrkLevel2::GetNTracks()<<")"<<endl;                  it >= 0 &&                                                //valid index
2858      };                  true ){
2859                        TClonesArray &t = *(tsorted);
2860      return image;                  PamTrack *temp = (PamTrack*) t[it];
2861                    if (temp->GetTrkTrack()->HasImage()) {              
2862                        return (PamTrack*)((*timage)[it]);                 //ok return the track
2863                    }else{
2864                        return NULL;
2865                    }
2866                }
2867            }
2868    
2869        }
2870    
2871        cout << "PamTrack *PamLevel2::GetTrackImage("<<it<<","<<alg<<") -- wrong track number or unrecognised algorithm"<<endl;
2872          
2873        return NULL;
2874    
2875  }  }
2876    ;
2877    
2878  //--------------------------------------  //--------------------------------------
2879  //  //
# Line 833  PamTrack *PamLevel2::GetTrackImage(int i Line 2885  PamTrack *PamLevel2::GetTrackImage(int i
2885   * @param detlist String to select trees to be included   * @param detlist String to select trees to be included
2886   * @return Pointer to a TTree   * @return Pointer to a TTree
2887   */   */
2888  TTree *PamLevel2::GetPamTree(TFile *f, TString detlist ){  TTree *PamLevel2::GetPamTree(TFile *f, TString detlist) {
2889    
2890  //     if( !detlist.IsNull() ) SetWhichTrees(detlist);    if (detlist.Contains("+AUTO", TString::kIgnoreCase)) {
2891  //     else                    GetWhichTrees(f);      cout << "+AUTO" << endl;
2892            GetWhichTrees(f);
2893      cout << "TTree *PamLevel2::GetPamTree(TFile *f, TString detlist ) -- obsolte "<<endl;    };
2894      SetWhichTrees(detlist);
2895    
2896      SetWhichTrees(detlist);    if (pam_tree) {
2897        printf("WARNING: TTree *PamLevel2::GetPamTree(TFile *fl, TString detlist) -- pam_tree already exists!\n ");
2898        return pam_tree;
2899      };
2900      //
2901    
2902      TTree *Trout =0;    cout << "TTree *PamLevel2::GetPamTree(TFile *f, TString detlist ) -- obsolte " << endl;
2903    
2904      TString fname = f->GetName();    //    SetWhichTrees(detlist);
     if(!CheckLevel2File(fname))return NULL;  
2905    
2906  //    UInt_t *found=0;        TTree *Trout = 0;
2907    
2908      cout<< "GetPamTree(TFile*,TString): detector list --> ";    TString fname = f->GetName();
2909      if(TRK1)cout<<"TRK1 ";    if (!CheckLevel2File(fname))
2910      if(TRK2)cout<<"TRK2 ";      return NULL;
2911      if(TRKh)cout<<"TRKH ";  
2912      if(CAL1)cout<<"CAL1 ";    //    UInt_t *found=0;
2913      if(CAL2)cout<<"CAL2 ";  
2914      if(TOF)cout<<"TOF ";    cout << "GetPamTree(TFile*,TString): detector list --> ";
2915      if(TRG)cout<<"TRG ";    if (TRK1)
2916      if(AC)cout<<"AC ";      cout << "TRK1 ";
2917      if(ND)cout<<"ND ";    if (TRK2)
2918      if(S4)cout<<"S4 ";      cout << "TRK2 ";
2919      if(ORB)cout<<"ORB ";    if (TRKh)
2920      cout << endl;      cout << "TRKH ";
2921      if(SELLI)cout<<">>> Found selection-list <<<"<<endl;    if (CAL1)
2922        cout << "CAL1 ";
2923      f->cd();    if (CAL2)
2924        cout << "CAL2 ";
2925  // Tracker    if (TOF)
2926      TTree *T = (TTree*)f->Get("Tracker");      cout << "TOF ";
2927      if(T && (TRK2||TRK1||TRKh)) {    if (TRG)
2928          if(TRK2)T->SetBranchAddress("TrkLevel2", GetPointerTo("TrkLevel2"));      cout << "TRG ";
2929  //      else    T->SetBranchStatus("TrkLevel2",0,found);    if (AC)
2930          if(TRK2)cout << "Tracker      : set branch address TrkLevel2"<<endl;      cout << "AC ";
2931          if(TRK1)T->SetBranchAddress("TrkLevel1", GetPointerTo("TrkLevel1"));    if (ND)
2932  //      else    T->SetBranchStatus("TrkLevel1",0,found);      cout << "ND ";
2933          if(TRK1)cout << "Tracker      : set branch address TrkLevel1"<<endl;    if (S4)
2934          if(TRKh)T->SetBranchAddress("TrkHough", GetPointerTo("TrkHough"));      cout << "S4 ";
2935  //      else    T->SetBranchStatus("TrkHough",0,found);    if (ORB)
2936          if(TRKh)cout << "Tracker      : set branch address TrkHough"<<endl;      cout << "ORB ";
2937          if(!Trout)Trout=T;    if (GP)
2938          else Trout->AddFriend(T);      cout << "GP ";
2939      }else{    cout << endl;
2940          cout << "Tracker      : missing tree"<<endl;    if (SELLI && SELLI != 2)
2941      };      cout << ">>> Found selection-list <<<" << endl; //EMILIANO
2942      // Calorimeter  
2943      TTree *C = (TTree*)f->Get("Calorimeter");    f->cd();
2944      if(C && (CAL2||CAL1)) {  
2945          if(CAL2)C->SetBranchAddress("CaloLevel2", GetPointerTo("CaloLevel2"));    // Tracker
2946  //      else    C->SetBranchStatus("CaloLevel2",0,found);    TTree *T = (TTree*) f->Get("Tracker");
2947          if(CAL2)cout << "Calorimeter  : set branch address CaloLevel2"<<endl;    if (T && (TRK2 || TRK1 || TRKh)) {
2948          if(CAL1)C->SetBranchAddress("CaloLevel1", GetPointerTo("CaloLevel1"));      if (TRK2)
2949  //      else    C->SetBranchStatus("CaloLevel1",0,found);        T->SetBranchAddress("TrkLevel2", GetPointerTo("TrkLevel2"));
2950          if(CAL1)cout << "Calorimeter  : set branch address CaloLevel1"<<endl;      //  else    T->SetBranchStatus("TrkLevel2",0,found);
2951          if(!Trout)Trout=C;      if (TRK2)
2952          else Trout->AddFriend(C);        cout << "Tracker      : set branch address TrkLevel2" << endl;
2953      }else{      if (TRK1)
2954          cout << "Calorimeter  : missing tree"<<endl;        T->SetBranchAddress("TrkLevel1", GetPointerTo("TrkLevel1"));
2955      };      //  else    T->SetBranchStatus("TrkLevel1",0,found);
2956        if (TRK1)
2957      // ToF            cout << "Tracker      : set branch address TrkLevel1" << endl;
2958      TTree *O = (TTree*)f->Get("ToF");      if (TRKh)
2959      if(O && TOF) {        T->SetBranchAddress("TrkHough", GetPointerTo("TrkHough"));
2960          O->SetBranchAddress("ToFLevel2", GetPointerTo("ToFLevel2"));      //  else    T->SetBranchStatus("TrkHough",0,found);
2961          cout << "ToF          : set branch address ToFLevel2"<<endl;      if (TRKh)
2962          if(!Trout)Trout=O;        cout << "Tracker      : set branch address TrkHough" << endl;
2963          else Trout->AddFriend(O);      if (!Trout)
2964      }else{        Trout = T;
2965          cout << "ToF         : missing tree"<<endl;      else
2966      };          Trout->AddFriend(T);
2967      // Trigger    }
2968      TTree *R = (TTree*)f->Get("Trigger");    else {
2969      if(R && TRG) {      cout << "Tracker      : missing tree" << endl;
2970          R->SetBranchAddress("TrigLevel2", GetPointerTo("TrigLevel2"));    };
2971          cout << "Trigger      : set branch address TrigLevel2"<<endl;    // Calorimeter
2972          if(!Trout)Trout=O;    TTree *C = (TTree*) f->Get("Calorimeter");
2973          else Trout->AddFriend(R);    if (C && (CAL2 || CAL1)) {
2974      }else{      if (CAL2)
2975          cout << "Trigger      : missing tree"<<endl;        C->SetBranchAddress("CaloLevel2", GetPointerTo("CaloLevel2"));
2976      };      //  else    C->SetBranchStatus("CaloLevel2",0,found);
2977      // S4      if (CAL2)
2978      TTree *S = (TTree*)f->Get("S4");        cout << "Calorimeter  : set branch address CaloLevel2" << endl;
2979      if(S && S4) {      if (CAL1)
2980          S->SetBranchAddress("S4Level2", GetPointerTo("S4Level2"));        C->SetBranchAddress("CaloLevel1", GetPointerTo("CaloLevel1"));
2981          cout << "S4           : set branch address S4Level2"<<endl;      //  else    C->SetBranchStatus("CaloLevel1",0,found);
2982          if(!Trout)Trout=O;      if (CAL1)
2983          else Trout->AddFriend(S);        cout << "Calorimeter  : set branch address CaloLevel1" << endl;
2984      }else{      if (!Trout)
2985          cout << "S4           : missing tree"<<endl;        Trout = C;
2986      };      else
2987      // Neutron Detector        Trout->AddFriend(C);
2988      TTree *N = (TTree*)f->Get("NeutronD");    }
2989      if(N && ND) {    else {
2990          N->SetBranchAddress("NDLevel2", GetPointerTo("NDLevel2"));      cout << "Calorimeter  : missing tree" << endl;
2991          cout << "NeutronD     : set branch address NDLevel2"<<endl;    };
2992          if(!Trout)Trout=O;  
2993          else Trout->AddFriend(N);    // ToF
2994      }else{    TTree *O = (TTree*) f->Get("ToF");
2995          cout << "NeutronD     : missing tree"<<endl;    if (O && TOF) {
2996      };      O->SetBranchAddress("ToFLevel2", GetPointerTo("ToFLevel2"));
2997      // Anticounters      cout << "ToF          : set branch address ToFLevel2" << endl;
2998      TTree *A = (TTree*)f->Get("Anticounter");      if (!Trout)
2999      if(A && AC) {        Trout = O;
3000          A->SetBranchAddress("AcLevel2", GetPointerTo("AcLevel2"));      else
3001          cout << "Anticounter  : set branch address AcLevel2"<<endl;        Trout->AddFriend(O);
3002          if(!Trout)Trout=O;    }
3003          else Trout->AddFriend(A);    else {
3004      }else{      cout << "ToF         : missing tree" << endl;
3005          cout << "Anticounter  : missing tree"<<endl;    };
3006      };    // Trigger
3007      // Orbital Info    TTree *R = (TTree*) f->Get("Trigger");
3008      TTree *B = (TTree*)f->Get("OrbitalInfo");    if (R && TRG) {
3009      if(B && ORB) {      R->SetBranchAddress("TrigLevel2", GetPointerTo("TrigLevel2"));
3010          B->SetBranchAddress("OrbitalInfo", GetPointerTo("OrbitalInfo"));      cout << "Trigger      : set branch address TrigLevel2" << endl;
3011          cout << "OrbitalInfo  : set branch address OrbitalInfo"<<endl;      if (!Trout)
3012          if(!Trout)Trout=O;        Trout = R;
3013          else Trout->AddFriend(B);      else
3014      }else{        Trout->AddFriend(R);
3015          cout << "OrbitalInfo  : missing tree"<<endl;    }
3016      };    else {
3017        cout << "Trigger      : missing tree" << endl;
3018      TTree *L = (TTree*)f->Get("SelectionList");    };
3019      if(L && SELLI==1) {    // S4
3020  //      L->SetBranchAddress("RunEntry",&irun);    TTree *S = (TTree*) f->Get("S4");
3021  //      cout << "SelectionList: set branch address RunEntry"<<endl;    if (S && S4) {
3022  //      L->SetBranchAddress("EventEntry",&irunentry);      S->SetBranchAddress("S4Level2", GetPointerTo("S4Level2"));
3023  //      cout << "SelectionList: set branch address EventEntry"<<endl;      cout << "S4           : set branch address S4Level2" << endl;
3024  //      if(!Trout)Trout=O;      if (!Trout)
3025  //      else Trout->AddFriend("SelectionList");        Trout = S;
3026          cout << " TTree *PamLevel2::GetPamTree(TFile, TString) >>> SelectionList not implemente!!!!"<<endl;      else
3027          sel_tree = 0;        Trout->AddFriend(S);
3028      }else{    }
3029          cout << "SelectionList  : missing tree"<<endl;    else {
3030      };      cout << "S4           : missing tree" << endl;
3031          };
3032      cout<<endl<<" Number of entries: "<<Trout->GetEntries()<<endl<<endl;    // Neutron Detector
3033      TTree *N = (TTree*) f->Get("NeutronD");
3034      if (N && ND) {
3035        N->SetBranchAddress("NDLevel2", GetPointerTo("NDLevel2"));
3036        cout << "NeutronD     : set branch address NDLevel2" << endl;
3037        if (!Trout)
3038          Trout = N;
3039        else
3040          Trout->AddFriend(N);
3041      }
3042      else {
3043        cout << "NeutronD     : missing tree" << endl;
3044      };
3045      // Anticounters
3046      TTree *A = (TTree*) f->Get("Anticounter");
3047      if (A && AC) {
3048        A->SetBranchAddress("AcLevel2", GetPointerTo("AcLevel2"));
3049        cout << "Anticounter  : set branch address AcLevel2" << endl;
3050        if (!Trout)
3051          Trout = A;
3052        else
3053          Trout->AddFriend(A);
3054      }
3055      else {
3056        cout << "Anticounter  : missing tree" << endl;
3057      };
3058      // Orbital Info
3059      TTree *B = (TTree*) f->Get("OrbitalInfo");
3060      if (B && ORB) {
3061        B->SetBranchAddress("OrbitalInfo", GetPointerTo("OrbitalInfo"));
3062        cout << "OrbitalInfo  : set branch address OrbitalInfo" << endl;
3063        if (!Trout)
3064          Trout = B;
3065        else
3066          Trout->AddFriend(B);
3067      }
3068      else {
3069        cout << "OrbitalInfo  : missing tree" << endl;
3070      };
3071    
3072      // GPamela
3073      TTree *G = (TTree*) f->Get("h20");
3074      if (G && GP) {
3075        if (!gp_obj)
3076          gp_obj = new GPamela();
3077        //      ------------------------------------
3078        //      ATTENZIONE!!!
3079        //      non so per quale arcano motivo,
3080        //      per l'albero di gpamela il branch address lo devo settare
3081        //      DOPO aver fatto friend
3082        //      FGRRRVZZZZUTSALKJMSLKJ!!!
3083        //      ------------------------------------
3084        //  gp_obj->SetBranchAddress(G); //ho dovuto fare in maniera diversa dagli altri
3085        //  cout << "h20          : set branch address GPamela "<<endl;
3086        if (!Trout)
3087          Trout = G;
3088        else
3089          Trout->AddFriend(G);
3090      }
3091      else {
3092        //  cout << "h20          : missing tree"<<endl;
3093      };
3094    
3095      TTree *L = (TTree*) f->Get("SelectionList");
3096      if (L && SELLI == 1) {
3097        cout << " TTree *PamLevel2::GetPamTree(TFile, TString) >>> SelectionList not implemented!!!!" << endl;
3098        sel_tree = 0;
3099      }
3100      else {
3101        cout << "SelectionList  : missing tree" << endl;
3102      };
3103    
3104      cout << endl << " Number of entries: " << Trout->GetEntries() << endl << endl;
3105    
3106      //      ------------------------------------
3107      //      ATTENZIONE!!!
3108      //      non so per quale arcano motivo,
3109      //      per l'albero di gpamela il branch address lo devo settare
3110      //      DOPO aver fatto friend
3111      //      FGRRRVZZZZUTSALKJMSLKJ!!!
3112      //      ------------------------------------
3113      if (G && GP) {
3114        gp_obj->SetBranchAddress(Trout); //ho dovuto fare in maniera diversa dagli altri
3115        cout << "h20          : set branch address GPamela " << endl;
3116      }
3117      else {
3118        cout << "h20          : missing tree" << endl;
3119      };
3120    
3121      pam_tree = (TChain*) Trout;
3122    
3123      return Trout;
3124    
     pam_tree = (TChain*)Trout;  
       
     return Trout;  
       
3125  }  }
3126  //--------------------------------------  //--------------------------------------
3127  //  //
# Line 991  TTree *PamLevel2::GetPamTree(TFile *f, T Line 3134  TTree *PamLevel2::GetPamTree(TFile *f, T
3134   * @return Pointer to a TList of TSystemFiles   * @return Pointer to a TList of TSystemFiles
3135   * If no input file list is given , all the Level2 files inside the directory are processed.   * If no input file list is given , all the Level2 files inside the directory are processed.
3136   */   */
3137  TList*  PamLevel2::GetListOfLevel2Files(TString ddir, TString flisttxt = ""){  TList* PamLevel2::GetListOfLevel2Files(TString ddir, TString flisttxt = "") {
3138            
3139      TString wdir = gSystem->WorkingDirectory();    TString wdir = gSystem->WorkingDirectory();
3140        
3141      if(ddir=="")ddir = wdir;    if (ddir != "") {
3142  //      TSystemDirectory *datadir = new TSystemDirectory(gSystem->BaseName(ddir),ddir);      cout << "Level2 data directory : " << ddir << endl;
3143      cout << "Level2 data directory : "<<  ddir << endl;    }
3144          else {
3145      TList *contents  = new TList; // create output list      cout << "Level2 data directory not given as input: trying to evaluate from list or taking working directory "
3146      contents->SetOwner();          << endl;
3147          };
3148  //    char *fullpath;    TList *contents = new TList; // create output list
3149  //    const char *fullpath;    contents->SetOwner();
3150        
3151      // if no input file list is given:      // --------------------------------------
3152      if ( flisttxt != "" ){    // case 1 : input file/file-list provided
3153              // --------------------------------------
3154  //      if( !gSystem->IsFileInIncludePath(flisttxt,&fullpath) ){            if (flisttxt != "") {
3155  //      if( !(fullpath = gSystem->FindFile("./",flisttxt)) ){  
3156  //          cout <<"File "<<flisttxt<<" not found"<<endl;      // --------------------------------------
3157  //          return 0;      // a list of files given as input
3158  //      }            // --------------------------------------
3159  //      flisttxt = fullpath;      if (!flisttxt.EndsWith(".root")) {
3160        if ( !flisttxt.EndsWith(".root") ){  
3161          TString dir = gSystem->DirName(flisttxt);
3162          flisttxt = gSystem->ConcatFileName(gSystem->DirName(flisttxt),gSystem->BaseName(flisttxt));        //            cout << " List directory "<<dir<<endl;
3163          if (dir == "." || dir == "")
3164          if( !gSystem->ChangeDirectory(ddir) ){          flisttxt = gSystem->ConcatFileName(wdir.Data(), gSystem->BaseName(flisttxt));
3165              cout << "Cannot change directory : "<<ddir<<endl;        //                flisttxt = gSystem->ConcatFileName(gSystem->DirName(flisttxt),gSystem->BaseName(flisttxt));
3166              return 0;  
3167          }        if (!gSystem->ChangeDirectory(ddir)) {
3168                    cout << "Cannot change directory : " << ddir << endl;
3169          cout <<"Input file list : " << flisttxt <<endl;          return 0;
3170          ifstream in;        }
3171          in.open(flisttxt, ios::in); //open input file list  
3172          if(!in.good()){        cout << "Input file list : " << flisttxt << endl;
3173              cout <<" ERROR opening the file "<<endl;        ifstream in;
3174              gSystem->ChangeDirectory(wdir); // back to the working directory        in.open(flisttxt, ios::in); //open input file list
3175              return 0;        if (!in.good()) {
3176          }                cout << " TList*  PamLevel2::GetListOfLevel2Files(TString, TString) --> ERROR opening the file " << endl;
3177          int line=0;          gSystem->ChangeDirectory(wdir); // back to the working directory
3178          while (1) {          return 0;
3179              TString file;        }
3180              in >> file;        int line = 0;
3181              if (!in.good()) break;        // ...........................
3182              line++;        // loop over file-list records
3183  //          cout <<"(1) " << file << endl;        // ...........................
3184              if(file.IsNull()){        while (1) {
3185                  cout << "-- list interrupted at line "<<line <<endl;          TString file;
3186                  break;          in >> file;
3187              }          if (!in.good())
3188              if(file.Contains("#"))file = file(0,file.First("#"));            break;
3189  //          cout <<"(2) " << file << endl;          line++;
3190  //          if( gSystem->IsFileInIncludePath(file,&fullpath) ){          cout << "(*) " << file << endl;
3191  //          if( (fullpath = gSystem->FindFile(ddir,file)) ){          if (file.IsNull()) {
3192              if( file.EndsWith(".root") ){            cout << "-- list interrupted at line " << line << endl;
3193                  char *fullpath = gSystem->ConcatFileName(gSystem->DirName(ddir),gSystem->BaseName(file));            break;
3194                  contents->Add(new TSystemFile(fullpath,gSystem->DirName(fullpath)));// add file to the list          }
3195                  delete fullpath;          if (file.Contains("#"))
3196              }            file = file(0, file.First("#"));
3197  //          }else{          //
3198  //              if(file.Data()!="")cout << "File: "<<file<<" ---> missing "<< endl;          // take only root files
3199  //          };          //
3200          };          if (file.EndsWith(".root")) {
3201          in.close();            TString filedir;
3202        } else {            cout << ddir << endl;
3203            char *fullpath = gSystem->ConcatFileName(gSystem->DirName(flisttxt),gSystem->BaseName(flisttxt));            if ( ddir != "" ) {
3204            contents->Add(new TSystemFile(fullpath,gSystem->DirName(fullpath)));// add file to the list              filedir = ddir; // take the input dir
3205            delete fullpath;            }
3206        };                    else {
3207      }else{              gSystem->ChangeDirectory(wdir); // back to the working directory
3208                        filedir = gSystem->DirName(file); // this will take the path if exist in the list otherwise it will return automatically the working dir
3209          cout << "No input file list given."<<endl;            };
3210          cout << "Check for existing root files."<<endl;            filedir.Append("/");
3211  //              cout << "Warking directory: "<< gSystem->WorkingDirectory()<< endl;            //          char *fullpath = gSystem->ConcatFileName(gSystem->DirName(filedir), gSystem->BaseName(file));
3212                      char *fullpath = gSystem->ConcatFileName(filedir.Data(), gSystem->BaseName(file));
3213          TSystemDirectory *datadir = new TSystemDirectory(gSystem->BaseName(ddir),ddir);            contents->Add(new TSystemFile(fullpath, gSystem->DirName(fullpath)));// add file to the list
3214          TList *temp = datadir->GetListOfFiles();            cout << fullpath << endl;
3215  //              temp->Print();            delete fullpath;
3216  //              cout << "*************************************" << endl;          }
3217                    //          }else{
3218          TIter next(temp);          //              if(file.Data()!="")cout << "File: "<<file<<" ---> missing "<< endl;
3219          TSystemFile *questo = 0;          //          };
3220                  };
3221                  in.close();
3222          while ( (questo = (TSystemFile*) next()) ) {        // --------------------------------------
3223              TString name =  questo-> GetName();        // a single root file given as input
3224              if( name.EndsWith(".root") ){        // --------------------------------------
3225  //              const char *fullpath = gSystem->FindFile(ddir,name);      }
3226  //              char *fullpath;      else {
3227  //              gSystem->IsFileInIncludePath(name,&fullpath);        if (flisttxt.Contains("#"))
3228                  char *fullpath = gSystem->ConcatFileName(gSystem->DirName(ddir),gSystem->BaseName(name));          flisttxt = flisttxt(0, flisttxt.First("#"));
3229                  contents->Add(new TSystemFile(fullpath,gSystem->DirName(fullpath)));        char *fullpath = gSystem->ConcatFileName(gSystem->DirName(flisttxt), gSystem->BaseName(flisttxt));
3230                  delete fullpath;        contents->Add(new TSystemFile(fullpath, gSystem->DirName(fullpath)));// add file to the list
3231              };        delete fullpath;
3232          }      };
3233          delete temp;      // ---------------------------------------------------------------------------------
3234          delete datadir;      // case 2 : no input file/file-list provided --> read all files insede the directory
3235                // ---------------------------------------------------------------------------------
3236      };    }
3237      gSystem->ChangeDirectory(wdir); // back to the working directory    else {
3238  //      cout << endl << "Selected files:" << endl;  
3239  //      contents->Print();      cout << "No input file list given." << endl;
3240      cout << contents->GetEntries()<<" files \n";      cout << "Check for existing root files." << endl;
3241  //      cout << endl;      //          cout << "Warking directory: "<< gSystem->WorkingDirectory()<< endl;
3242  //      cout << "Working directory: "<< gSystem->WorkingDirectory()<< endl;      if (ddir == "") {
3243      return contents;        ddir = wdir;
3244  };        cout << "Level2 data directory : " << ddir << endl;
3245        };
3246    
3247        TSystemDirectory *datadir = new TSystemDirectory(gSystem->BaseName(ddir), ddir);
3248        TList *temp = datadir->GetListOfFiles();
3249        if (!temp)
3250          return 0;
3251        //          temp->Print();
3252        //          cout << "*************************************" << endl;
3253    
3254        TIter next(temp);
3255        TSystemFile *questo = 0;
3256    
3257        while ((questo = (TSystemFile*) next())) {
3258          TString name = questo-> GetName();
3259          if (name.EndsWith(".root")) {
3260            //              const char *fullpath = gSystem->FindFile(ddir,name);
3261            //              char *fullpath;
3262            //              gSystem->IsFileInIncludePath(name,&fullpath);
3263            char *fullpath = gSystem->ConcatFileName(gSystem->DirName(ddir), gSystem->BaseName(name));
3264            contents->Add(new TSystemFile(fullpath, gSystem->DirName(fullpath)));
3265            delete fullpath;
3266          };
3267        }
3268        delete temp;
3269        delete datadir;
3270    
3271      };
3272      gSystem->ChangeDirectory(wdir); // back to the working directory
3273      //    cout << endl << "Selected files:" << endl;
3274      //    contents->Print();
3275      cout << contents->GetEntries() << " files \n";
3276      //    cout << endl;
3277      //    cout << "Working directory: "<< gSystem->WorkingDirectory()<< endl;
3278      return contents;
3279    }
3280    ;
3281  //--------------------------------------  //--------------------------------------
3282  //  //
3283  //  //
3284  //--------------------------------------  //--------------------------------------
3285  /**  /**
3286   * Get the Pamela detector chains from a list of files and make them friends.   * Get the Pamela detector chains from a list of files and make them friends.
3287   * @param fl Pointer to a TList of TSystemFiles   * @param fl Pointer to a TList of TSystemFiles
3288   * @param detlist String to select trees to be included   * @param detlist String to select trees to be included
3289   * @return Pointer to a TChain   * @return Pointer to a TChain
3290   */   */
3291  TChain *PamLevel2::GetPamTree(TList *fl, TString detlist ){  TChain *PamLevel2::GetPamTree(TList *fl, TString detlist) {
3292          //
3293      TChain *Trout =0;    //
3294      //
3295  //    if( !detlist.IsNull() )SetWhichTrees(detlist);    if (pam_tree) {
3296      SetWhichTrees(detlist);      printf("WARNING: TChain *PamLevel2::GetPamTree(TList *fl, TString detlist) -- pam_tree already exists!\n ");
3297            return pam_tree;
3298      cout<< "GetPamTree(TList*,TString): input detector list --> ";    };
3299      if(TRK1)cout<<"TRK1 ";    //
     if(TRK2)cout<<"TRK2 ";  
     if(TRKh)cout<<"TRKH ";  
     if(CAL1)cout<<"CAL1 ";  
     if(CAL2)cout<<"CAL2 ";  
     if(TOF)cout<<"TOF ";  
     if(TRG)cout<<"TRG ";  
     if(AC)cout<<"AC ";  
     if(ND)cout<<"ND ";  
     if(S4)cout<<"S4 ";  
     if(ORB)cout<<"ORB ";  
     cout << endl;  
   
     TChain *T = 0;        
     TChain *C = 0;  
     TChain *O = 0;  
     TChain *R = 0;  
     TChain *S = 0;  
     TChain *N = 0;  
     TChain *A = 0;  
     TChain *B = 0;  
3300    
3301      TChain *L = 0;    TChain *Trout = 0;
       
     if(TRK2||TRK1||TRKh) T = new TChain("Tracker");      
     if(CAL2||CAL1)       C = new TChain("Calorimeter");  
     if(TOF)              O = new TChain("ToF");  
     if(TRG)              R = new TChain("Trigger");  
     if(S4)               S = new TChain("S4");  
     if(ND)               N = new TChain("NeutronD");  
     if(AC)               A = new TChain("Anticounter");  
     if(ORB)              B = new TChain("OrbitalInfo");  
3302    
3303       L = new TChain("SelectionList");    // -------------------------------------------
3304          // set flags to include/exclude trees/branches
3305      // loop over files and create chains            // -------------------------------------------
3306      TIter next(fl);    if (detlist.Contains("+AUTO", TString::kIgnoreCase)) {
3307      TSystemFile *questo = 0;      if (fl->GetEntries() > 0) {
3308      while ( (questo = (TSystemFile*) next()) ) {        cout << "+AUTO" << endl;
3309          TString name =  questo->GetName();        TFile *fprimo = new TFile(fl->At(0)->GetName());
3310          cout << "File: "<< name << endl;        GetWhichTrees(fprimo);
3311          if( CheckLevel2File(name) ){        fprimo->Close();// AAAAARGGGGGHHHHH!!!!!!! non commentare questa riga, altrimenti si incasina il TChain
3312              if(TRK2||TRK1||TRKh) T->Add(name);        fprimo->Delete();
             if(CAL1||CAL2)       C->Add(name);  
             if(TOF)              O->Add(name);  
             if(TRG)              R->Add(name);  
             if(S4)               S->Add(name);  
             if(ND)               N->Add(name);  
             if(AC)               A->Add(name);  
             if(ORB)              B->Add(name);  
             if(SELLI==1)         L->Add(name);  
         };  
3313      }      }
3314          };
3315      cout << "done chain \n";    SetWhichTrees(detlist);
3316    
3317  //    UInt_t *found=0;    // -------------------------------------------
3318  // Tracker    // build chains
3319      if(T && (TRK2||TRK1||TRKh)) {    // -------------------------------------------
3320          if(TRK2)T->SetBranchAddress("TrkLevel2", GetPointerTo("TrkLevel2"));    TChain *T = 0;
3321  //      else    T->SetBranchStatus("TrkLevel2",0,found);    TChain *C = 0;
3322          if(TRK2)cout << "Tracker      : set branch address TrkLevel2"<<endl;    TChain *O = 0;
3323          if(TRK1)T->SetBranchAddress("TrkLevel1", GetPointerTo("TrkLevel1"));    TChain *R = 0;
3324  //      else    T->SetBranchStatus("TrkLevel1",0,found);    TChain *S = 0;
3325          if(TRK1)cout << "Tracker      : set branch address TrkLevel1"<<endl;    TChain *N = 0;
3326          if(TRKh)T->SetBranchAddress("TrkHough", GetPointerTo("TrkHough"));    TChain *A = 0;
3327  //      else    T->SetBranchStatus("TrkHough",0,found);    TChain *B = 0;
3328          if(TRKh)cout << "Tracker      : set branch address TrkHough"<<endl;    TChain *G = 0;
3329          if(!Trout)Trout=T;  
3330          else Trout->AddFriend("Tracker");    TChain *L = 0;
3331      }else{    TChain *P = 0;
3332          cout << "Tracker      : missing tree"<<endl;  
3333      };    if (TRK2 || TRK1 || TRKh)
3334      // Calorimeter      T = new TChain("Tracker");
3335      if(C && (CAL2||CAL1)) {    if (CAL2 || CAL1)
3336          if(CAL2)C->SetBranchAddress("CaloLevel2", GetPointerTo("CaloLevel2"));      C = new TChain("Calorimeter");
3337  //      else    C->SetBranchStatus("CaloLevel2",0,found);    if (TOF)
3338          if(CAL2)cout << "Calorimeter  : set branch address CaloLevel2"<<endl;      O = new TChain("ToF");
3339          if(CAL1)C->SetBranchAddress("CaloLevel1", GetPointerTo("CaloLevel1"));    if (TRG)
3340  //      else    C->SetBranchStatus("CaloLevel1",0,found);      R = new TChain("Trigger");
3341          if(CAL1)cout << "Calorimeter  : set branch address CaloLevel1"<<endl;    if (S4)
3342          if(!Trout)Trout=C;      S = new TChain("S4");
3343          else Trout->AddFriend("Calorimeter");    if (ND)
3344      }else{      N = new TChain("NeutronD");
3345          cout << "Calorimeter  : missing tree"<<endl;    if (AC)
3346      };      A = new TChain("Anticounter");
3347      // ToF        if (ORB)
3348      if(O && TOF) {      B = new TChain("OrbitalInfo");
3349          O->SetBranchAddress("ToFLevel2", GetPointerTo("ToFLevel2"));    if (GP)
3350          cout << "ToF          : set branch address ToFLevel2"<<endl;      G = new TChain("h20");
3351          if(!Trout)Trout=O;    if (PROC)
3352          else Trout->AddFriend("ToF");      P = new TChain("ProcessingInfo");
3353      }else{    L = new TChain("SelectionList");
3354          cout << "ToF         : missing tree"<<endl;  
3355      };    // loop over files and create chains
3356      // Trigger    TIter next(fl);
3357      if(R && TRG) {    TSystemFile *questo = 0;
3358          R->SetBranchAddress("TrigLevel2", GetPointerTo("TrigLevel2"));    while ((questo = (TSystemFile*) next())) {
3359          cout << "Trigger      : set branch address TrigLevel2"<<endl;      TString name = questo->GetName();
3360          if(!Trout)Trout=O;      cout << "File: " << name << endl;
3361          else Trout->AddFriend("Trigger");      if (CheckLevel2File(name)) {
3362      }else{        if (TRK2 || TRK1 || TRKh)
3363          cout << "Trigger      : missing tree"<<endl;          T->Add(name);
3364      };        if (CAL1 || CAL2)
3365      // S4          C->Add(name);
3366      if(S && S4) {        if (TOF)
3367          S->SetBranchAddress("S4Level2", GetPointerTo("S4Level2"));          O->Add(name);
3368          cout << "S4           : set branch address S4Level2"<<endl;        if (TRG)
3369          if(!Trout)Trout=O;          R->Add(name);
3370          else Trout->AddFriend("S4");        if (S4)
3371      }else{          S->Add(name);
3372          cout << "S4           : missing tree"<<endl;        if (ND)
3373      };          N->Add(name);
3374      // Neutron Detector        if (AC)
3375      if(N && ND) {          A->Add(name);
3376          N->SetBranchAddress("NDLevel2", GetPointerTo("NDLevel2"));        if (ORB)
3377          cout << "NeutronD     : set branch address NDLevel2"<<endl;          B->Add(name);
3378          if(!Trout)Trout=O;        if (GP)
3379          else Trout->AddFriend("NeutronD");          G->Add(name);
3380      }else{        if (P)
3381          cout << "NeutronD     : missing tree"<<endl;          P->Add(name);
3382      };        if (SELLI == 1)
3383      // Anticounters          L->Add(name);
3384      if(A && AC) {       };
3385          A->SetBranchAddress("AcLevel2", GetPointerTo("AcLevel2"));    };
3386          cout << "Anticounter  : set branch address AcLevel2"<<endl;  
3387          if(!Trout)Trout=O;    cout << "done data-tree chains  "<<  T->GetNtrees() <<" \n";
3388          else Trout->AddFriend("Anticounter");    cout << "----------------------------------------------------" << endl;
3389      }else{  
3390          cout << "Anticounter  : missing tree"<<endl;    // -------------------------------------------
3391      };    // make friends
3392      // Orbital Info    // -------------------------------------------
3393      if(B && ORB) {  
3394          B->SetBranchAddress("OrbitalInfo", GetPointerTo("OrbitalInfo"));    // Tracker
3395          cout << "OrbitalInfo  : set branch address OrbitalInfo"<<endl;    cout << "Friends: " << endl;
3396          if(!Trout)Trout=O;    if (T && (TRK2 || TRK1 || TRKh)) {
3397          else Trout->AddFriend("OrbitalInfo");      if (!Trout)
3398      }else{        Trout = T;
3399          cout << "OrbitalInfo  : missing tree"<<endl;      else
3400      };        Trout->AddFriend("Tracker");
3401        //  cout << "+Tacker"<<endl;
3402      // Selection List    };
3403      if(L && SELLI==1) {    // Calorimeter
3404          cout<<">>> Found selection-list <<<"<<endl;    if (C && (CAL2 || CAL1)) {
3405          L->SetBranchAddress("RunEntry",&irun);      if (!Trout)
3406          cout << "SelectionList: set branch address RunEntry"<<endl;        Trout = C;
3407          L->SetBranchAddress("EventEntry",&irunentry);      else
3408          cout << "SelectionList: set branch address EventEntry"<<endl;        Trout->AddFriend("Calorimeter");
3409          sel_tree = L;      //  cout << "+Calorimeter"<<endl;
3410  //      if(!Trout)Trout=O;    };
3411  //      else Trout->AddFriend("SelectionList");    // ToF
3412      }else{    if (O && TOF) {
3413  //      cout << "SelectionList  : missing tree"<<endl;      if (!Trout)
3414          if(L)L->Delete();        Trout = O;
3415      };      else
3416              Trout->AddFriend("ToF");
3417  //    cout<<endl<<" Number of entries: "<<Trout->GetEntries()<<endl<<endl;      //  cout << "+ToF"<<endl;
3418      };
3419      // Trigger
3420      if (R && TRG) {
3421        if (!Trout)
3422          Trout = O;
3423        else
3424          Trout->AddFriend("Trigger");
3425        //  cout << "+Trigger"<<endl;
3426      };
3427      // S4
3428      if (S && S4) {
3429        if (!Trout)
3430          Trout = O;
3431        else
3432          Trout->AddFriend("S4");
3433        //  cout << "+S4"<<endl;
3434      };
3435      // Neutron Detector
3436      if (N && ND) {
3437        if (!Trout)
3438          Trout = O;
3439        else
3440          Trout->AddFriend("NeutronD");
3441        //  cout << "+NeutronD"<<endl;
3442      };
3443      // Anticounters
3444      if (A && AC) {
3445        if (!Trout)
3446          Trout = O;
3447        else
3448          Trout->AddFriend("Anticounter");
3449        //  cout << "+Anticounter"<<endl;
3450      };
3451      // Orbital Info
3452      if (B && ORB) {
3453        if (!Trout)
3454          Trout = O;
3455        else
3456          Trout->AddFriend("OrbitalInfo");
3457        //  cout << "+OrbitalInfo"<<endl;
3458      };
3459      // GPamela
3460      if (G && GP) {
3461        if (!Trout)
3462          Trout = G;
3463        else
3464          Trout->AddFriend("h20");
3465        //  cout << "+h20"<<endl;
3466      };
3467    
3468      //  =====================================
3469      //  SET BRANCH-ADDRESS AFTER CHAIN+FRIEND
3470      //  =====================================
3471      if( Trout->GetNtrees() )SetBranchAddress(Trout);
3472    
3473      //  ------------------------------------
3474      //  finally handle selection trees...
3475      //  (it is not friend of pamela tree)
3476      //  ------------------------------------
3477    
3478      cout << "----------------------------------------------------" << endl;
3479    
3480      // Selection List
3481      if (L && SELLI == 1) {
3482        cout << ">>> Found selection-list <<<" << endl;
3483        //  L->SetBranchAddress("RunEntry",&irun);
3484        L->SetBranchAddress("RunEntry", &irunt);//NEWNEW
3485        cout << "SelectionList: set branch address RunEntry" << endl;
3486        L->SetBranchAddress("EventEntry", &irunentry);
3487        cout << "SelectionList: set branch address EventEntry" << endl;
3488        /*    if ( L->GetBranch("L0EventEntry") ){
3489          hasL0EE = true;
3490          L->SetBranchAddress("L0EventEntry", &il0entry);
3491          cout << "SelectionList: set branch address L0EventEntry" << endl;
3492        } else {
3493          hasL0EE = false; // backward compatibility with old preselected files...
3494          }*/
3495        sel_tree = L;
3496        //          if(!Trout)Trout=O;
3497        //          else Trout->AddFriend("SelectionList");
3498        cout << "+SelectionList" << endl;
3499        cout << "----------------------------------------------------" << endl;
3500      }
3501      else {
3502        //  cout << "SelectionList  : missing tree"<<endl;
3503        if (L)
3504          L->Delete();
3505      };
3506    
3507      pam_tree = Trout;    //ProcessingInfo EM
3508      if ( P && P->GetEntries() ){
3509        cout << "----------------------------------------------------" << endl;
3510        cout << ">>> Found ProcessingInfo <<<" << endl;
3511        //  L->SetBranchAddress("RunEntry",&irun);
3512        P->SetBranchAddress("ProcInfo", &proc_obj);//NEWNEW
3513        proc_tree = P;
3514      } else {
3515        //    proc_tree = new TChain("ProcessingInfo","Log of data processing");
3516        //    proc_tree->Branch("ProcInfo", "ProcInfo", &proc_obj);
3517        cout << "----------------------------------------------------" << endl;
3518        cout << ">>> ProcessingInfo not found, PROC set to false and continue (not 10RED files?)<<<" << endl;
3519        PROC = false;
3520      }
3521      //  --------------------------------------------
3522      //  return the pamela chain with all the friends
3523      //  --------------------------------------------
3524    
3525      return Trout;    pam_tree = Trout;
3526      return Trout;
3527  }  }
3528    
3529    //--------------------------------------
3530    //
3531    //
3532    //--------------------------------------
3533    /**
3534     * Set branch addresses for Pamela friend trees
3535     */
3536    void PamLevel2::SetBranchAddress(TTree *t) {
3537    
3538    //   TRK2 = TRK2 & t->GetBranchStatus("TrkLevel2");
3539    //   TRK1 = TRK1 & t->GetBranchStatus("TrkLevel1");
3540    //   TRKh = TRKh & t->GetBranchStatus("TrkHough");
3541    //   CAL2 = CAL2 & t->GetBranchStatus("CaloLevel2");
3542    //   CAL1 = CAL1 & t->GetBranchStatus("CaloLevel1");
3543    //   TOF = TOF & t->GetBranchStatus("ToFLevel2");
3544    //   TRG = TRG & t->GetBranchStatus("TrigLevel2");
3545    //   S4 = S4 & t->GetBranchStatus("S4Level2");
3546    //   ND = ND & t->GetBranchStatus("NDLevel2");
3547    //   AC = AC & t->GetBranchStatus("AcLevel2");
3548    //   ORB = ORB & t->GetBranchStatus("OrbitalInfo");
3549    //   GP = GP & t->GetBranchStatus("h20");
3550    
3551    
3552      // Tracker
3553      if (TRK1) {
3554        t->SetBranchAddress("TrkLevel1", GetPointerTo("TrkLevel2"));
3555        cout << "Tracker      : set branch address TrkLevel1" << endl;
3556      };
3557      if (TRK2) {
3558        t->SetBranchAddress("TrkLevel2", GetPointerTo("TrkLevel1"));
3559        cout << "Tracker      : set branch address TrkLevel2" << endl;
3560        NUC = t->GetBranchStatus("TrackNuclei");
3561        EXT = t->GetBranchStatus("RecoveredTrack") && (NUC ? t->GetBranchStatus("RecoveredTrackNuclei"): true );    
3562      };
3563      if (TRKh) {
3564        t->SetBranchAddress("TrkHough", GetPointerTo("TrkHough"));
3565        cout << "Tracker      : set branch address TrkHough" << endl;
3566      };
3567    
3568      // Calorimeter
3569      if (CAL1) {
3570        t->SetBranchAddress("CaloLevel1", GetPointerTo("CaloLevel1"));
3571        cout << "Calorimeter  : set branch address CaloLevel1" << endl;
3572      };
3573      if (CAL2) {
3574        t->SetBranchAddress("CaloLevel2", GetPointerTo("CaloLevel2"));
3575        cout << "Calorimeter  : set branch address CaloLevel2" << endl;
3576      };
3577    
3578      // ToF
3579      if (TOF) {
3580        t->SetBranchAddress("ToFLevel2", GetPointerTo("ToFLevel2"));
3581        cout << "ToF          : set branch address ToFLevel2" << endl;
3582      };
3583      // Trigger
3584      if (TRG) {
3585        t->SetBranchAddress("TrigLevel2", GetPointerTo("TrigLevel2"));
3586        cout << "Trigger      : set branch address TrigLevel2" << endl;
3587      };
3588      // S4
3589      if (S4) {
3590        t->SetBranchAddress("S4Level2", GetPointerTo("S4Level2"));
3591        cout << "S4           : set branch address S4Level2" << endl;
3592      };
3593      // Neutron Detector
3594      if (ND) {
3595        t->SetBranchAddress("NDLevel2", GetPointerTo("NDLevel2"));
3596        cout << "NeutronD     : set branch address NDLevel2" << endl;
3597      };
3598      // Anticounters
3599      if (AC) {
3600        t->SetBranchAddress("AcLevel2", GetPointerTo("AcLevel2"));
3601        cout << "Anticounter  : set branch address AcLevel2" << endl;
3602      };
3603      // OrbitalInfo
3604      if (ORB) {
3605        t->SetBranchAddress("OrbitalInfo", GetPointerTo("OrbitalInfo"));
3606        cout << "OrbitalInfo  : set branch address OrbitalInfo" << endl;
3607      };
3608      // GPamela
3609      if (GP) {
3610        //  GetPointerTo("GPamela");
3611        if (!gp_obj)
3612          gp_obj = new GPamela();
3613        //  gp_obj->SetBranchAddress(t); //ho dovuto fare in maniera diversa dagli altri
3614        // //       t->SetBranchAddress("GPamela", GetPointerTo("GPamela"));
3615        if (SELLI)
3616          t->SetBranchAddress("GPamela", GetPointerTo("GPamela"));
3617        else
3618          gp_obj->SetBranchAddress(t); //ho dovuto fare in maniera diversa dagli altri
3619    
3620        cout << "h20          : set branch address GPamela " << endl;
3621      };
3622      if(NUC){
3623          
3624          cout << "Found nuclei-track branches" << endl;
3625    
3626          if( !trk_nuc_obj )trk_nuc_obj = new TClonesArray("TrkTrack");
3627          if( !calo_nuc_obj)calo_nuc_obj= new TClonesArray("CaloTrkVar");
3628          if( !tof_nuc_obj)tof_nuc_obj= new TClonesArray("ToFTrkVar");
3629          if( !orb_nuc_obj)orb_nuc_obj= new TClonesArray("OrbitalInfoTrkVar");
3630          if (TRK2)t->                          SetBranchAddress("TrackNuclei",&trk_nuc_obj);
3631          if (CAL2)t->GetFriend("Calorimeter")->SetBranchAddress("TrackNuclei",&calo_nuc_obj);
3632          if (TOF )t->GetFriend("ToF")->        SetBranchAddress("TrackNuclei",&tof_nuc_obj);
3633          if (ORB )t->GetFriend("OrbitalInfo")->SetBranchAddress("TrackNuclei",&orb_nuc_obj);
3634    
3635          ///copy the vector content inside a "fake" object (all aother info are missing)    
3636    
3637          if( !trk2_nuc_obj )trk2_nuc_obj =  new TrkLevel2();
3638          if( !calo2_nuc_obj )calo2_nuc_obj =  new CaloLevel2();
3639          if( !tof2_nuc_obj )tof2_nuc_obj =  new ToFLevel2();
3640          if( !orb2_nuc_obj )orb2_nuc_obj =  new OrbitalInfo();
3641    //       *(trk2_nuc_obj->GetPointerToTrackArray()) = new TClonesArray(*trk_nuc_obj);
3642    //       *(calo2_nuc_obj->GetPointerToTrackArray()) = new TClonesArray(*calo_nuc_obj);
3643    //       *(tof2_nuc_obj->GetPointerToTrackArray()) = new TClonesArray(*tof_nuc_obj);
3644    //       *(orb2_nuc_obj->GetPointerToTrackArray()) = new TClonesArray(*orb_nuc_obj);
3645    
3646          trk2_nuc_obj->SetTrackArray(  trk_nuc_obj  );
3647          calo2_nuc_obj->SetTrackArray( calo_nuc_obj );
3648          tof2_nuc_obj->SetTrackArray(  tof_nuc_obj  );
3649          orb2_nuc_obj->SetTrackArray(  orb_nuc_obj  );
3650    
3651          
3652      }    
3653    
3654      if(EXT){
3655          
3656          cout << "Found extended tracking algorythm branches" << endl;
3657    
3658          if( !trk_ext_obj )trk_ext_obj = new TClonesArray("ExtTrack");
3659          if( !calo_ext_obj)calo_ext_obj= new TClonesArray("CaloTrkVar");
3660          if( !tof_ext_obj)tof_ext_obj= new TClonesArray("ToFTrkVar");
3661          if( !orb_ext_obj)orb_ext_obj= new TClonesArray("OrbitalInfoTrkVar");
3662          
3663          if (TRK2)t->                          SetBranchAddress("RecoveredTrack",&trk_ext_obj);
3664          if (CAL2)t->GetFriend("Calorimeter")->SetBranchAddress("RecoveredTrack",&calo_ext_obj);
3665          if (TOF )t->GetFriend("ToF")->        SetBranchAddress("RecoveredTrack",&tof_ext_obj);
3666          if (ORB )t->GetFriend("OrbitalInfo")->SetBranchAddress("RecoveredTrack",&orb_ext_obj);
3667    
3668  //--------------------------------------      
3669  //        if(NUC){
3670  //            if( !trk_ext_nuc_obj )trk_ext_nuc_obj = new TClonesArray("ExtTrack");
3671  //--------------------------------------            if( !calo_ext_nuc_obj)calo_ext_nuc_obj= new TClonesArray("CaloTrkVar");
3672              if( !tof_ext_nuc_obj)tof_ext_nuc_obj= new TClonesArray("ToFTrkVar");
3673              if( !orb_ext_nuc_obj)orb_ext_nuc_obj= new TClonesArray("OrbitalInfoTrkVar");
3674              if (TRK2)t->                          SetBranchAddress("RecoveredTrackNuclei",&trk_ext_nuc_obj);
3675              if (CAL2)t->GetFriend("Calorimeter")->SetBranchAddress("RecoveredTrackNuclei",&calo_ext_nuc_obj);
3676              if (TOF )t->GetFriend("ToF")->        SetBranchAddress("RecoveredTrackNuclei",&tof_ext_nuc_obj);
3677              if (ORB )t->GetFriend("OrbitalInfo")->SetBranchAddress("RecoveredTrackNuclei",&orb_ext_nuc_obj);
3678          }
3679      }    
3680    }
3681  /**  /**
3682   * Set branch addresses for Pamela friend trees   * Set branch addresses for Pamela friend trees
3683   */   */
3684  void PamLevel2::SetBranchAddress(TTree *t){  void PamLevel2::SetBranchAddress(TChain *t) {
3685    
3686      TRK2    = TRK2 & t->GetBranchStatus("TrkLevel2");    //     TRK2    = TRK2 & t->GetBranchStatus("TrkLevel2");
3687      TRK1    = TRK1 & t->GetBranchStatus("TrkLevel1");    //     TRK1    = TRK1 & t->GetBranchStatus("TrkLevel1");
3688      TRKh    = TRKh & t->GetBranchStatus("TrkHough");    //     TRKh    = TRKh & t->GetBranchStatus("TrkHough");
3689      CAL2    = CAL2 & t->GetBranchStatus("CaloLevel2");    //     CAL1    = CAL1 & t->GetBranchStatus("CaloLevel1");
3690      CAL1    = CAL1 & t->GetBranchStatus("CaloLevel1");    //     CAL2    = CAL2 & t->GetBranchStatus("CaloLevel2");
3691      TOF    = TOF & t->GetBranchStatus("ToFLevel2");    //     TOF    = TOF & t->GetBranchStatus("ToFLevel2");
3692      TRG    = TRG & t->GetBranchStatus("TrigLevel2");    //     TRG    = TRG & t->GetBranchStatus("TrigLevel2");
3693      S4     = S4  & t->GetBranchStatus("S4Level2");    //     S4     = S4  & t->GetBranchStatus("S4Level2");
3694      ND     = ND  & t->GetBranchStatus("NDLevel2");    //     ND     = ND  & t->GetBranchStatus("NDLevel2");
3695      AC     = AC  & t->GetBranchStatus("AcLevel2");    //     AC     = AC  & t->GetBranchStatus("AcLevel2");
3696      ORB    = ORB & t->GetBranchStatus("OrbitalInfo");    //     ORB    = ORB & t->GetBranchStatus("OrbitalInfo");
3697      //    GP     = GP & t->GetBranchStatus("h20");
3698    
3699      // Tracker    // Tracker
3700      if(TRK1) {    if (TRK2) {
3701          t->SetBranchAddress("TrkLevel1", GetPointerTo("TrkLevel2"));      t->SetBranchAddress("TrkLevel2", GetPointerTo("TrkLevel2"));
3702          cout << "Tracker      : set branch address TrkLevel1"<<endl;      cout << "Tracker      : set branch address TrkLevel2" << endl;
3703      };      NUC = t->GetBranchStatus("TrackNuclei");
3704      if(TRK2) {      EXT = t->GetBranchStatus("RecoveredTrack") && (NUC ? t->GetBranchStatus("RecoveredTrackNuclei"): true );
3705          t->SetBranchAddress("TrkLevel2", GetPointerTo("TrkLevel1"));    };
3706          cout << "Tracker      : set branch address TrkLevel2"<<endl;    if (TRK1) {
3707      };      t->SetBranchAddress("TrkLevel1", GetPointerTo("TrkLevel1"));
3708      if(TRKh) {      cout << "Tracker      : set branch address TrkLevel1" << endl;
3709          t->SetBranchAddress("TrkHough", GetPointerTo("TrkHough"));    };
3710          cout << "Tracker      : set branch address TrkHough"<<endl;    if (TRKh) {
3711      };      t->SetBranchAddress("TrkHough", GetPointerTo("TrkHough"));
3712            cout << "Tracker      : set branch address TrkHough" << endl;
3713      // Calorimeter    };
3714      if(CAL1) {  
3715          t->SetBranchAddress("CaloLevel1", GetPointerTo("CaloLevel1"));    // Calorimeter
3716          cout << "Calorimeter  : set branch address CaloLevel1"<<endl;    if (CAL2) {
3717      };      t->SetBranchAddress("CaloLevel2", GetPointerTo("CaloLevel2"));
3718      if(CAL2) {      cout << "Calorimeter  : set branch address CaloLevel2" << endl;    
3719          t->SetBranchAddress("CaloLevel2", GetPointerTo("CaloLevel2"));    };
3720          cout << "Calorimeter  : set branch address CaloLevel2"<<endl;    if (CAL1) {
3721      };      t->SetBranchAddress("CaloLevel1", GetPointerTo("CaloLevel1"));
3722            cout << "Calorimeter  : set branch address CaloLevel1" << endl;
3723      // ToF        };
3724      if(TOF) {  
3725          t->SetBranchAddress("ToFLevel2", GetPointerTo("ToFLevel2"));    // ToF
3726          cout << "ToF          : set branch address ToFLevel2"<<endl;    if (TOF) {
3727      };      t->SetBranchAddress("ToFLevel2", GetPointerTo("ToFLevel2"));
3728      // Trigger      cout << "ToF          : set branch address ToFLevel2" << endl;
3729      if(TRG) {    };
3730          t->SetBranchAddress("TrigLevel2", GetPointerTo("TrigLevel2"));    // Trigger
3731          cout << "Trigger      : set branch address TrigLevel2"<<endl;    if (TRG) {
3732      };      t->SetBranchAddress("TrigLevel2", GetPointerTo("TrigLevel2"));
3733      // S4      cout << "Trigger      : set branch address TrigLevel2" << endl;
3734      if(S4) {    };
3735          t->SetBranchAddress("S4Level2", GetPointerTo("S4Level2"));    // S4
3736          cout << "S4           : set branch address S4Level2"<<endl;    if (S4) {
3737      };      t->SetBranchAddress("S4Level2", GetPointerTo("S4Level2"));
3738      // Neutron Detector      cout << "S4           : set branch address S4Level2" << endl;
3739      if(ND) {    };
3740          t->SetBranchAddress("NDLevel2", GetPointerTo("NDLevel2"));    // Neutron Detector
3741          cout << "NeutronD     : set branch address NDLevel2"<<endl;    if (ND) {
3742      };      t->SetBranchAddress("NDLevel2", GetPointerTo("NDLevel2"));
3743      // Anticounters      cout << "NeutronD     : set branch address NDLevel2" << endl;
3744      if(AC) {    };
3745          t->SetBranchAddress("AcLevel2", GetPointerTo("AcLevel2"));    // Anticounters
3746          cout << "Anticounter  : set branch address AcLevel2"<<endl;    if (AC) {
3747      };      t->SetBranchAddress("AcLevel2", GetPointerTo("AcLevel2"));
3748      // OrbitalInfo      cout << "Anticounter  : set branch address AcLevel2" << endl;
3749      if(ORB) {    };
3750          t->SetBranchAddress("OrbitalInfo", GetPointerTo("OrbitalInfo"));    // OrbitalInfo
3751          cout << "OrbitalInfo  : set branch address OrbitalInfo"<<endl;    if (ORB) {
3752      };      t->SetBranchAddress("OrbitalInfo", GetPointerTo("OrbitalInfo"));
3753      // SelectionList      cout << "OrbitalInfo  : set branch address OrbitalInfo" << endl;
3754      if(SELLI==1) {    };
3755          t->SetBranchAddress("RunEntry", &irun);    // GPamela
3756          cout << "SelectionList: set branch address RunEntry"<<endl;    //    cout <<"GP "<<GP<<endl;
3757          t->SetBranchAddress("EventEntry", &irunentry);    if (GP) {
3758          cout << "SelectionList: set branch address EventEntry"<<endl;      //  GetPointerTo("GPamela");
3759      };      if (!gp_obj)
3760              gp_obj = new GPamela();
3761        if (SELLI)
3762          t->SetBranchAddress("GPamela", GetPointerTo("GPamela"));
3763        else
3764          gp_obj->SetBranchAddress(t); //ho dovuto fare in maniera diversa dagli altri
3765        //  gp_obj->SetBranchAddress(t); //ho dovuto fare in maniera diversa dagli altri
3766        cout << "h20          : set branch address GPamela " << endl;
3767      };
3768      // SelectionList
3769      //     if(SELLI==1){
3770      //    t->SetBranchAddress("RunEntry",&irunt);//NEWNEW
3771      //    cout << "SelectionList: set branch address RunEntry"<<endl;
3772      //    t->SetBranchAddress("EventEntry",&irunentry);
3773      //    cout << "SelectionList: set branch address EventEntry"<<endl;
3774    
3775      //     }
3776      if(NUC){
3777          
3778          cout << "Found nuclei-track branches" << endl;
3779    
3780          if( !trk_nuc_obj )trk_nuc_obj = new TClonesArray("TrkTrack");
3781          if( !calo_nuc_obj)calo_nuc_obj= new TClonesArray("CaloTrkVar");
3782          if( !tof_nuc_obj)tof_nuc_obj= new TClonesArray("ToFTrkVar");
3783          if( !orb_nuc_obj)orb_nuc_obj= new TClonesArray("OrbitalInfoTrkVar");
3784          if (TRK2)t->                          SetBranchAddress("TrackNuclei",&trk_nuc_obj);
3785          if (CAL2)t->GetFriend("Calorimeter")->SetBranchAddress("TrackNuclei",&calo_nuc_obj);
3786          if (TOF )t->GetFriend("ToF")->        SetBranchAddress("TrackNuclei",&tof_nuc_obj);
3787          if (ORB )t->GetFriend("OrbitalInfo")->SetBranchAddress("TrackNuclei",&orb_nuc_obj);
3788          
3789          ///copy the vector content inside a "fake" object (all aother info are missing)    
3790    
3791          if( !trk2_nuc_obj )trk2_nuc_obj =  new TrkLevel2();
3792          if( !calo2_nuc_obj )calo2_nuc_obj =  new CaloLevel2();
3793          if( !tof2_nuc_obj )tof2_nuc_obj =  new ToFLevel2();
3794          if( !orb2_nuc_obj )orb2_nuc_obj =  new OrbitalInfo();
3795    
3796    //       *(trk2_nuc_obj->GetPointerToTrackArray()) = new TClonesArray(*trk_nuc_obj);
3797    //       *(calo2_nuc_obj->GetPointerToTrackArray()) = new TClonesArray(*calo_nuc_obj);
3798    //       *(tof2_nuc_obj->GetPointerToTrackArray()) = new TClonesArray(*tof_nuc_obj);
3799    //       *(orb2_nuc_obj->GetPointerToTrackArray()) = new TClonesArray(*orb_nuc_obj);
3800          trk2_nuc_obj->SetTrackArray(  trk_nuc_obj  );
3801          calo2_nuc_obj->SetTrackArray( calo_nuc_obj );
3802          tof2_nuc_obj->SetTrackArray(  tof_nuc_obj  );
3803          orb2_nuc_obj->SetTrackArray(  orb_nuc_obj  );
3804    
3805      }    
3806      if(EXT){
3807          
3808          cout << "Found extended tracking algorythm branches" << endl;
3809    
3810          t->SetBranchAddress("extAlgFlag",&extAlgFlag);
3811    
3812          if( !trk_ext_obj )trk_ext_obj = new TClonesArray("ExtTrack");
3813          if( !calo_ext_obj)calo_ext_obj= new TClonesArray("CaloTrkVar");
3814          if( !tof_ext_obj)tof_ext_obj= new TClonesArray("ToFTrkVar");
3815          if( !orb_ext_obj)orb_ext_obj= new TClonesArray("OrbitalInfoTrkVar");
3816          
3817          if (TRK2)t->                          SetBranchAddress("RecoveredTrack",&trk_ext_obj);
3818          if (CAL2)t->GetFriend("Calorimeter")->SetBranchAddress("RecoveredTrack",&calo_ext_obj);
3819          if (TOF )t->GetFriend("ToF")->        SetBranchAddress("RecoveredTrack",&tof_ext_obj);
3820          if (ORB )t->GetFriend("OrbitalInfo")->SetBranchAddress("RecoveredTrack",&orb_ext_obj);
3821          
3822          if(NUC){
3823              if( !trk_ext_nuc_obj )trk_ext_nuc_obj = new TClonesArray("ExtTrack");
3824              if( !calo_ext_nuc_obj)calo_ext_nuc_obj= new TClonesArray("CaloTrkVar");
3825              if( !tof_ext_nuc_obj)tof_ext_nuc_obj= new TClonesArray("ToFTrkVar");
3826              if( !orb_ext_nuc_obj)orb_ext_nuc_obj= new TClonesArray("OrbitalInfoTrkVar");
3827              if (TRK2)t->                          SetBranchAddress("RecoveredTrackNuclei",&trk_ext_nuc_obj);
3828              if (CAL2)t->GetFriend("Calorimeter")->SetBranchAddress("RecoveredTrackNuclei",&calo_ext_nuc_obj);
3829              if (TOF )t->GetFriend("ToF")->        SetBranchAddress("RecoveredTrackNuclei",&tof_ext_nuc_obj);
3830              if (ORB )t->GetFriend("OrbitalInfo")->SetBranchAddress("RecoveredTrackNuclei",&orb_ext_nuc_obj);
3831          }
3832      }    
3833      
3834  }  }
3835    
3836  /**  /**
3837   * Set branch addresses for Pamela friend trees   * Set the tracking algorythm
3838     * @param alg String to choose the track.
3839     * "" --> take the output of the standard tracking algorythm
3840     * "STD" --> take the output of the standard tracking algorythm
3841     * "NUC" --> take the output of the standard tracking algorythm for nuclei cluster selection
3842     * "EXT" --> in case the standard tracking algorythm has not found any track, take the output of the extended one
3843     * "EXTF" --> force the extended tracking algorythm
3844     * "NUCEXT" --> as "EXT", but for nuclei
3845     * "NUCEXTF" --> as "EXTF", but for nuclei
3846   */   */
3847  void PamLevel2::SetBranchAddress(TChain *t){  // void PamLevel2::SetTrackingAlgorythm(const char *alg){
3848    
3849    
3850    //     TString s(alg);
3851    //     if(s.Contains("NUC", TString::kIgnoreCase) && !NUC)
3852    //      cout << "Warning! NUC algorythm requested, but branches are missing"<<endl;
3853    //     if(s.Contains("EXT", TString::kIgnoreCase) && !EXT)
3854    //      cout << "Warning! EXT algorythm requested, but branches are missing"<<endl;;
3855                
3856    //     trkAlg = alg;
3857    
3858    // };
3859    // const char* PamLevel2::GetTrackingAlgorythm(){
3860    
3861    
3862    //     cout<<endl<<" Implemented tracking algorythm: ";
3863    //     cout<<endl<<"  \"\" or \"STD\"  --> take the output of the standard tracking algorythm";
3864    //     cout<<endl<<"  \"NUC\"      --> take the output of the standard tracking algorythm for nuclei cluster selection";
3865    //     cout<<endl<<"  \"EXT\"      --> in case the standard tracking algorythm has not found any track,";
3866    //     cout<<endl<<"                 take the output of the extended one";
3867    //     cout<<endl<<"  \"EXTF\"     --> force the extended tracking algorythm";
3868    //     cout<<endl<<"  \"NUCEXT\"   --> as \"EXT\", but for nuclei ";
3869    //     cout<<endl<<"  \"NUCEXTF\"  --> as \"EXTF\", but for nuclei";
3870    
3871    //     cout<<endl;
3872    //     cout<<" <<Currently set algorythm>> "<<trkAlg<<endl;
3873    //     cout<<endl;
3874    
3875    //     return trkAlg;
3876    // };
3877    
     TRK2    = TRK2 & t->GetBranchStatus("TrkLevel2");  
     TRK1    = TRK1 & t->GetBranchStatus("TrkLevel1");  
     TRKh    = TRKh & t->GetBranchStatus("TrkHough");  
     CAL1    = CAL1 & t->GetBranchStatus("CaloLevel1");  
     CAL2    = CAL2 & t->GetBranchStatus("CaloLevel2");  
     TOF    = TOF & t->GetBranchStatus("ToFLevel2");  
     TRG    = TRG & t->GetBranchStatus("TrigLevel2");  
     S4     = S4  & t->GetBranchStatus("S4Level2");  
     ND     = ND  & t->GetBranchStatus("NDLevel2");  
     AC     = AC  & t->GetBranchStatus("AcLevel2");  
     ORB    = ORB & t->GetBranchStatus("OrbitalInfo");  
   
     // Tracker  
      if(TRK2) {  
         t->SetBranchAddress("TrkLevel2", GetPointerTo("TrkLevel2"));  
         cout << "Tracker      : set branch address TrkLevel2"<<endl;  
     };  
     if(TRK1) {  
         t->SetBranchAddress("TrkLevel1", GetPointerTo("TrkLevel1"));  
         cout << "Tracker      : set branch address TrkLevel1"<<endl;  
     };  
      if(TRKh) {  
         t->SetBranchAddress("TrkHough", GetPointerTo("TrkHough"));  
         cout << "Tracker      : set branch address TrkHough"<<endl;  
      };  
       
     // Calorimeter  
     if(CAL2) {  
         t->SetBranchAddress("CaloLevel2", GetPointerTo("CaloLevel2"));  
         cout << "Calorimeter  : set branch address CaloLevel2"<<endl;  
     };    
     if(CAL1) {  
         t->SetBranchAddress("CaloLevel1", GetPointerTo("CaloLevel1"));  
         cout << "Calorimeter  : set branch address CaloLevel1"<<endl;  
     };  
       
     // ToF      
     if(TOF) {  
         t->SetBranchAddress("ToFLevel2", GetPointerTo("ToFLevel2"));  
         cout << "ToF          : set branch address ToFLevel2"<<endl;  
     };  
     // Trigger  
     if(TRG) {  
         t->SetBranchAddress("TrigLevel2", GetPointerTo("TrigLevel2"));  
         cout << "Trigger      : set branch address TrigLevel2"<<endl;  
     };  
     // S4  
     if(S4) {  
         t->SetBranchAddress("S4Level2", GetPointerTo("S4Level2"));  
         cout << "S4           : set branch address S4Level2"<<endl;  
     };  
     // Neutron Detector  
     if(ND) {  
         t->SetBranchAddress("NDLevel2", GetPointerTo("NDLevel2"));  
         cout << "NeutronD     : set branch address NDLevel2"<<endl;  
     };  
     // Anticounters  
     if(AC) {  
         t->SetBranchAddress("AcLevel2", GetPointerTo("AcLevel2"));  
         cout << "Anticounter  : set branch address AcLevel2"<<endl;  
     };  
     // OrbitalInfo  
     if(ORB) {  
         t->SetBranchAddress("OrbitalInfo", GetPointerTo("OrbitalInfo"));  
         cout << "OrbitalInfo  : set branch address OrbitalInfo"<<endl;  
     };  
     // SelectionList  
     if(SELLI==1) {  
         t->SetBranchAddress("RunEntry", &irun);  
         cout << "SelectionList: set branch address RunEntry"<<endl;  
         t->SetBranchAddress("EventEntry", &irunentry);  
         cout << "SelectionList: set branch address EventEntry"<<endl;  
     };  
       
 }  
3878    
3879    
3880  //--------------------------------------  //--------------------------------------
# Line 1455  void PamLevel2::SetBranchAddress(TChain Line 3883  void PamLevel2::SetBranchAddress(TChain
3883  //--------------------------------------  //--------------------------------------
3884  /**  /**
3885   * Get the Run tree chain from a list of files.   * Get the Run tree chain from a list of files.
3886   * @param fl Pointer to a TList of TSystemFiles   * @param fl Pointer to a TList of TSystemFiles
3887   * @return Pointer to a TChain   * @return Pointer to a TChain
3888   */   */
3889  TChain *PamLevel2::GetRunTree(TList *fl){  TChain *PamLevel2::GetRunTree(TList *fl) {
3890              //
3891      TChain *R = new TChain("Run");    //
3892          //
3893      // loop over files and create chains            if (run_tree) {
3894      TIter next(fl);      printf("WARNING: TChain *PamLevel2::GetRunTree(TList *fl) -- run_tree already exists!\n ");
3895      TSystemFile *questo = 0;      return run_tree;
3896      while ( (questo = (TSystemFile*) next()) ) {    };
3897          TString name =  questo->GetName();    //
 //              cout << "File: "<< name << endl;  
         if( CheckLevel2File(name) ){  
             R->Add(name);  
         };  
     }  
3898    
3899      if(R->GetNtrees()){  
3900          TChain *R = new TChain("Run");
3901          R->SetBranchAddress("RunInfo", GetPointerTo("RunInfo"));  
3902          cout << "Run         : set branch address RunInfo"<<endl;    // loop over files and create chains
3903          R->SetBranchAddress("SoftInfo", GetPointerTo("SoftInfo")); // Emiliano    TIter next(fl);
3904          cout << "Software    : set branch address SoftInfo"<<endl; // Emiliano    TSystemFile *questo = 0;
3905      }else{    while ((questo = (TSystemFile*) next())) {
3906          delete R;      TString name = questo->GetName();
3907          R=0;      //          cout << "File: "<< name << endl;
3908        if (CheckLevel2File(name)) {
3909          R->Add(name);
3910        };
3911      }
3912    
3913      cout << "done run chain  "<<  R->GetNtrees() <<" \n";
3914    
3915    
3916      if (RUN && R->GetNtrees()) {
3917    
3918        R->SetBranchAddress("RunInfo", GetPointerTo("RunInfo"));
3919        cout << "Run         : set branch address RunInfo" << endl;
3920        R->SetBranchAddress("SoftInfo", GetPointerTo("SoftInfo")); // Emiliano
3921        cout << "Software    : set branch address SoftInfo" << endl; // Emiliano
3922    
3923        irunoffset = new int[R->GetNtrees()];
3924        if (DBG) {
3925          cout << "----------------------------------------------------" << endl;
3926          cout << "irun\t | ";
3927          cout << "tree\t |";
3928          //        cout << "offset\t |";
3929          cout << "RUN\t";
3930          cout << "FRAG\t";
3931          cout << "NEVENTS\t";
3932          cout << "absolute time\t\t\t";
3933          cout << "on-board time";
3934          cout << endl;
3935      }      }
3936        for (Int_t ii = 0; ii < R->GetEntries(); ii++) {
3937          R->GetEntry(ii);
3938          if (DBG) {
3939            cout << ii << "\t | ";
3940            cout << R->GetTreeNumber() << "\t |";
3941            //          cout << R->GetChainOffset()<< "\t |";
3942            cout << GetRunInfo()->ID << "\t";
3943            cout << GetRunInfo()->ID_RUN_FRAG << "\t";
3944            cout << GetRunInfo()->NEVENTS << "\t";
3945            cout << GetRunInfo()->RUNHEADER_TIME << " <---> " << GetRunInfo()->RUNTRAILER_TIME << "\t";
3946            cout << GetRunInfo()->RUNHEADER_OBT << " <---> " << GetRunInfo()->RUNTRAILER_OBT << "\t";
3947            cout << endl;
3948          }
3949          irunoffset[R->GetTreeNumber()] = R->GetChainOffset();
3950        }
3951        cout << "N.run = " << R->GetEntries() << endl;
3952        cout << "----------------------------------------------------" << endl;
3953    
3954      run_tree = R;    }
3955    //   else {
3956    //     delete R;
3957    //     R = 0;
3958    //   }
3959    
3960      run_tree = R;
3961    
3962      return R;
3963    
     return R;  
       
3964  }  }
3965  //--------------------------------------  //--------------------------------------
3966  //  //
# Line 1495  TChain *PamLevel2::GetRunTree(TList *fl) Line 3968  TChain *PamLevel2::GetRunTree(TList *fl)
3968  //--------------------------------------  //--------------------------------------
3969  /**  /**
3970   * Get the Run tree  from a file.   * Get the Run tree  from a file.
3971   * @param f Pointer to a TFile   * @param f Pointer to a TFile
3972   * @return Pointer to a TTree   * @return Pointer to a TTree
3973   */   */
3974  TTree *PamLevel2::GetRunTree(TFile *f){  TTree *PamLevel2::GetRunTree(TFile *f) {
3975      if (run_tree) {
3976        printf("WARNING: TTree *PamLevel2::GetRunTree(TFile *f) -- run_tree already exists!\n ");
3977        return run_tree;
3978      };
3979    
3980      cout << "TTree *PamLevel2::GetRunTree(TFile *f) -- obsolte "<<endl;    cout << "TTree *PamLevel2::GetRunTree(TFile *f) -- obsolte " << endl;
3981    
3982      TTree *R = (TTree*)f->Get("Run");    TTree *T = (TTree*) f->Get("Run");
       
     if(R){  
         R->SetBranchAddress("RunInfo", GetPointerTo("RunInfo"));  
         cout << "Run         : set branch address RunInfo"<<endl;  
         R->SetBranchAddress("SoftInfo", GetPointerTo("SoftInfo")); // Emiliano  
         cout << "Software    : set branch address SoftInfo"<<endl; // Emiliano  
     }  
3983    
3984      run_tree = (TChain*)R;    if (T) {
3985        T->SetBranchAddress("RunInfo", GetPointerTo("RunInfo"));
3986        cout << "Run         : set branch address RunInfo" << endl;
3987        T->SetBranchAddress("SoftInfo", GetPointerTo("SoftInfo")); // Emiliano
3988        cout << "Software    : set branch address SoftInfo" << endl; // Emiliano
3989    
3990      }
3991    
3992      run_tree = (TChain*) T;
3993    
3994      return T;
3995    
     return R;  
       
3996  }  }
3997  /**  
3998   * Update the runinfo informations (to be used to have Run infos event by event basis)  Bool_t PamLevel2::UpdateRunInfo(Long64_t iev) {
3999   * @param run Pointer to the chain/tree which contains run infos  
4000   * @return true if a new run has been read, false if it is still the same run    if (DBG) printf("PamLevel2::UpdateRunInfo(Long64_t) - inside\n");
4001   */  
4002  Bool_t PamLevel2::UpdateRunInfo(TChain *run, ULong64_t iev){    if (!run_tree) {
4003    //      cout << " Bool_t PamLevel2::UpdateRunInfo(ULong64_t iev) -- ERROR -- run tree not loaded" << endl;
4004    // check if we have already called once GetEntry, if not call it      return false;
4005    //    }
4006    if ( run->GetEntries() <= 0 ) return(false);    if (run_tree->GetEntries() <= 0) {
4007    //      cout << " Bool_t PamLevel2::UpdateRunInfo(ULong64_t iev) -- ERROR -- run tree is empty" << endl;
4008          return (false);
4009    Int_t oldrun = irun;    }
4010    // --------------------------------------  
4011    
4012      Int_t oldrun = irun; // store current run index
4013    
4014      // -----------------------------------------------------------------------
4015      // the first time the routine is called, set run search from the beginning
4016      // -----------------------------------------------------------------------
4017    
4018      if (irun < 0) {
4019        irun = 0LL;
4020        irunt = 0LL;
4021        totrunentry = 0LL;
4022        totrunentrymin = 0LL;
4023        totrunentrymax = 0LL;
4024        irunentry = 0LL;
4025        il0entry = 0LL;
4026        prevshift = 0;
4027        yprevshift = 0;
4028        prevabstime = 0;
4029        prevpktnum = 0;
4030        abstime = 0ULL;
4031        pktnum = 0;
4032        isFragment = false;
4033        run_tree->GetEntry(irun);
4034        if (!GetOrbitalInfo())
4035          cout << "** WARNING ** missing OrbitalInfo ---> run info might be not correctly updated " << endl;
4036        if ( fUseDBinRunInfo ){
4037          if (gltsync)
4038            delete gltsync; //Emiliano
4039          if (!dbc || (dbc && !dbc->IsConnected()))
4040            SetDBConnection(); //Emiliano
4041          gltsync = new GL_TIMESYNC(GetRunInfo()->ID_ROOT_L0, "ID", dbc, false); //Emiliano // the "false" means not to use level0 file (not necessary here)
4042          if (dbc){
4043            dbc->Close();// Emiliano
4044            delete dbc;
4045            dbc=0;
4046          }
4047        }
4048      }
4049      // ---------------------------------------------------------------
4050      // retrieve OBT and absolute time of the event
4051      // ---------------------------------------------------------------
4052      Long64_t obt = 0LL; // Emiliano, Long64_t GL_TIMESYNC::DBobt(UInt_t obt) since depending on the situation OBT is lowered or boosted
4053      prevabstime = abstime;
4054      prevpktnum = pktnum;
4055      if (GetOrbitalInfo()) {
4056        abstime = GetOrbitalInfo()->absTime;
4057        if ( fUseDBinRunInfo ) obt = gltsync->DBobt(GetOrbitalInfo()->OBT); // Emiliano
4058        pktnum = GetOrbitalInfo()->pkt_num; // Emiliano
4059      }
4060      else {
4061        abstime = GetRunInfo()->RUNHEADER_TIME;
4062        if ( fUseDBinRunInfo ) obt = gltsync->DBobt(GetRunInfo()->RUNHEADER_OBT); // Emiliano
4063        pktnum = GetRunInfo()->RUNHEADER_PKT; // Emiliano
4064      }
4065    
4066      if (DBG){
4067        printf("0abstime %lld %lld pktnum %d %d obt %lld \n",abstime,prevabstime,pktnum,prevpktnum,obt);
4068        printf("0        rth %d %d nevents %d  \n",GetRunInfo()->RUNHEADER_TIME,GetRunInfo()->RUNTRAILER_TIME,GetRunInfo()->NEVENTS);
4069        printf("0        rto %d %d \n",GetRunInfo()->RUNHEADER_OBT,GetRunInfo()->RUNTRAILER_OBT);
4070        if ( fUseDBinRunInfo ) printf("0        rto2 %lld %lld \n",gltsync->DBobt(GetRunInfo()->RUNHEADER_OBT),gltsync->DBobt(GetRunInfo()->RUNTRAILER_OBT));
4071        printf("0        bo irunentry %lld prevshift %lld irun %lld  \n",irunentry,prevshift,irun);
4072        printf("0        min %lld iev %lld max %lld tot %lld \n",totrunentrymin,iev,totrunentrymax,totrunentry);
4073      }
4074    
4075      // +-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-
4076    // if it is a full file (not preselected)    // if it is a full file (not preselected)
4077    // --------------------------------------    // +-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-
4078    if(SELLI==0){    if (SELLI == 0 || SELLI == 2) { // Emiliano
4079        if ( irun < 0 ){  
4080            irun = 0;      // ---------------------------------------------------------------
4081            run->GetEntry(irun);      // increment dead and live-time counters
4082            runfirstentry = 0ULL;      // (only when reading a file not preselected)
4083            runlastentry += (ULong64_t)(this->GetRunInfo()->NEVENTS);      // ---------------------------------------------------------------
4084            if ( (ULong64_t)(this->GetRunInfo()->NEVENTS) > 0ULL ) runlastentry -= 1ULL;      if (SELLI == 0) {
4085            return(true);        if (GetTrigLevel2()) {
4086        };                totdltime[0] += GetTrigLevel2()->dltime[0];
4087            totdltime[1] += GetTrigLevel2()->dltime[1];
       if( !GetOrbitalInfo() ){  
           cout << "Bool_t PamLevel2::UpdateRunInfo(TChain *run, ULong64_t iev) -- ERROR -- missing OrbitalInfo "<<endl;  
           return(false);  
4088        }        }
4089        // modificato il controllo sull'aggiornamento del run, per evitare problemi        totdltime[2]++;
4090        // dovuti agli eventi annidati (NB! NEVENTS conta anche questi!!)      }
4091        //  
4092        bool fromfirst = true;      //
4093        //      bool a = true;
4094        while ( !(GetOrbitalInfo()->absTime >= GetRunInfo()->RUNHEADER_TIME && GetOrbitalInfo()->absTime <= GetRunInfo()->RUNTRAILER_TIME) && irun < run->GetEntries() ){      bool b = true;
4095  //      while ( iev > (runfirstentry+(ULong64_t)(this->GetRunInfo()->NEVENTS-1)) && irun < run->GetEntries() ){      if ( fUseDBinRunInfo ){
4096            irun++;        a = false;    
4097            run->GetEntry(irun);        b = false;
4098            runfirstentry = runlastentry;        if ( obt < gltsync->DBobt(GetRunInfo()->RUNHEADER_OBT) ) a = true;
4099            if ( (ULong64_t)(this->GetRunInfo()->NEVENTS) > 0ULL ) runfirstentry += 1ULL;        if ( obt > gltsync->DBobt(GetRunInfo()->RUNTRAILER_OBT) ) b = true;
4100            runlastentry += (ULong64_t)(this->GetRunInfo()->NEVENTS);      }
4101            //      printf(" iev %llu %u %llu \n",iev,this->GetRunInfo()->NEVENTS,(ULong64_t)(runfirstentry+(ULong64_t)(this->GetRunInfo()->NEVENTS)));      if ( iev < totrunentrymin || iev > totrunentrymax // entry is outside run limits
4102            //      printf(" abstime %u trailertime %u \n",GetOrbitalInfo()->absTime,GetRunInfo()->RUNTRAILER_TIME);           || iev == 0 // or it is the first entry
4103            //      printf(" IDRUN %u \n",GetRunInfo()->ID);           || (!isSync && (
4104            //                           (abstime <= GetRunInfo()->RUNHEADER_TIME && a ) // or it is outside obt limits (and abstime limits for security reasons)
4105            prevshift = 0;                           || (abstime >= GetRunInfo()->RUNTRAILER_TIME && b ) ))// or it is outside obt limits (and abstime limits for security reasons)
4106            //           ){ // check on abstime and obt needed to handle nested+DV_skipped packets
4107            if ( irun == run->GetEntries()-1 && fromfirst && !(GetOrbitalInfo()->absTime >= GetRunInfo()->RUNHEADER_TIME && GetOrbitalInfo()->absTime <= GetRunInfo()->RUNTRAILER_TIME)){        
4108              //      printf(" resetting irun \n");        // check for a new run (ma prima il primo!)
4109              fromfirst = false;        if (DBG){
4110              irun = 0;          printf("1abstime %lld %lld pktnum %d %d obt %lld \n",abstime,prevabstime,pktnum,prevpktnum,obt);
4111              run->GetEntry(irun);          printf("1        rth %d %d nevents %d  \n",GetRunInfo()->RUNHEADER_TIME,GetRunInfo()->RUNTRAILER_TIME,GetRunInfo()->NEVENTS);
4112              runfirstentry = 0ULL;          printf("1        rto %d %d \n",GetRunInfo()->RUNHEADER_OBT,GetRunInfo()->RUNTRAILER_OBT);
4113              runlastentry += (ULong64_t)(this->GetRunInfo()->NEVENTS);          if ( fUseDBinRunInfo ) printf("1        rto2 %lld %lld \n",gltsync->DBobt(GetRunInfo()->RUNHEADER_OBT),gltsync->DBobt(GetRunInfo()->RUNTRAILER_OBT));
4114              if ( (ULong64_t)(this->GetRunInfo()->NEVENTS) > 0ULL ) runlastentry -= 1ULL;          printf("1        bo irunentry %lld prevshift %lld irun %lld  \n",irunentry,prevshift,irun);
4115            };          printf("1        min %lld iev %lld max %lld tot %lld \n",totrunentrymin,iev,totrunentrymax,totrunentry);
4116            //        }
4117        };        //        printf("1abstime %lld %lld pktnum %d %d obt %lld \n",abstime,prevabstime,pktnum,prevpktnum,obt);
4118        //        //        printf("1        rth %d %d nevents %d  \n",GetRunInfo()->RUNHEADER_TIME,GetRunInfo()->RUNTRAILER_TIME,GetRunInfo()->NEVENTS);
4119        if ( !fromfirst && !(GetOrbitalInfo()->absTime >= GetRunInfo()->RUNHEADER_TIME && GetOrbitalInfo()->absTime <= GetRunInfo()->RUNTRAILER_TIME) ) printf(" Something very wrong here: cannot find RUN containing absolute time %u \n",GetOrbitalInfo()->absTime);        //        printf("1        rto %d %d \n",GetRunInfo()->RUNHEADER_OBT,GetRunInfo()->RUNTRAILER_OBT);
4120        //        //        printf("1        rto2 %lld %lld \n",gltsync->DBobt(GetRunInfo()->RUNHEADER_OBT),gltsync->DBobt(GetRunInfo()->RUNTRAILER_OBT));
4121        if ( irun == oldrun || irun >= run->GetEntries() ) return(false);        //        printf("1        bo irunentry %lld prevshift %lld irun %lld  \n",irunentry,prevshift,irun);
4122        //        //        printf("1        min %lld iev %lld max %lld tot %lld \n",totrunentrymin,iev,totrunentrymax,totrunentry);//TOGLITOGLI
4123        //  printf(" iev %llu irun %i nevents %u 1st %llu last %llu \n",iev,irun,this->GetRunInfo()->NEVENTS,(ULong64_t)runfirstentry,(ULong64_t)runlastentry);  
4124        //        totrunentry = 0LL;
4125        return(true);            runfirstentry = 0LL;
4126    };        for (Int_t r=0; r< run_tree->GetEntries();r++){
4127    // ----------------------------------------------------          // -------------------------------------------------------------------
4128            // save the index of the first entry of the run, relative to pam_tree,
4129            // and read a new run
4130            // -------------------------------------------------------------------
4131            run_tree->GetEntry(r);//update runinfo
4132            if ( r > 0 ){
4133              totrunentrymin = totrunentrymax+1;
4134            } else {
4135              totrunentrymin = 0LL;
4136            }
4137            totrunentry += GetRunInfo()->NEVENTS;
4138            totrunentrymax = totrunentry - 1 - prevshift; // prevshift is needed to handle nested+DV_skipped packets
4139            irun = r;        
4140            if ( fUseDBinRunInfo ){
4141              a = false;    
4142              b = false;
4143              if ( obt < gltsync->DBobt(GetRunInfo()->RUNHEADER_OBT) ) a = true;
4144              if ( obt > gltsync->DBobt(GetRunInfo()->RUNTRAILER_OBT) ) b = true;
4145            }
4146            if ( (iev >= totrunentrymin && iev <= totrunentrymax) || // entry is inside run limits
4147                 ( !isSync &&
4148                   ( abstime >= GetRunInfo()->RUNHEADER_TIME  && a // or it is inside obt limits (and abstime limits for security reasons)
4149                     && abstime <= GetRunInfo()->RUNTRAILER_TIME && b))  // or it is inside obt limits (and abstime limits for security reasons)
4150                 ){ // check on abstime and obt needed to handle nested+DV_skipped packets
4151              if ( totrunentrymin > iev ){ // there is a shift (nested+DV_skipped packets)
4152                if ( !isSync ){
4153                  if (DBG) printf("PamLevel2::UpdateRunInfo(Long64_t) - unconsistent iev - nevents, probable DBL0-L2 async\n");
4154                  if (DBG) printf("PamLevel2::UpdateRunInfo(Long64_t) - totrunentrymin %lld iev %lld prevshift %lld totrunentrymax %lld \n",totrunentrymin,iev,prevshift,totrunentrymax);
4155                  //              printf("PamLevel2::UpdateRunInfo(Long64_t) - unconsistent iev - nevents, probable DBL0-L2 async\n");
4156                  //              printf("PamLevel2::UpdateRunInfo(Long64_t) - totrunentrymin %lld iev %lld prevshift %lld totrunentrymax %lld \n",totrunentrymin,iev,prevshift,totrunentrymax);//TOGLITOGLI
4157                  prevshift += (totrunentrymin-iev); // add the new shift to total shift
4158                  totrunentrymin -= (totrunentrymin-iev); // shift run position min
4159                  totrunentrymax -= (totrunentrymin-iev); // shift run position max
4160                  if (DBG) printf("PamLevel2::UpdateRunInfo(Long64_t) - totrunentrymin %lld iev %lld prevshift %lld totrunentrymax %lld \n",totrunentrymin,iev,prevshift,totrunentrymax);
4161                  //              printf("PamLevel2::UpdateRunInfo(Long64_t) - totrunentrymin %lld iev %lld prevshift %lld totrunentrymax %lld \n",totrunentrymin,iev,prevshift,totrunentrymax);//TOGLITOGLI
4162                } else {
4163                  printf(" PamLevel2::UpdateRunInfo(Long64_t) ERROR! sync file but unconsistent totrunetrymin %lld and iev %lld!!! \n",totrunentrymin,iev);
4164                  cout << " OK this is a bug, write to Emiliano, Emiliano.Mocchiutti@ts.infn.it " << endl;
4165                  cout << "\nFor bug reporting instructions, please see for example:\n";
4166                  cout << "     <http://www.ts.infn.it/~mocchiut/bugs/bugs.html>.\n";
4167                  cout << "  " << endl;
4168                }
4169              }
4170              runfirstentry = totrunentrymin; // first entry of the run in the level2
4171              
4172    
4173              //
4174              if ( fUseDBinRunInfo ){
4175                if (gltsync)
4176                  delete gltsync; // Emiliano
4177                if (!dbc || (dbc && !dbc->IsConnected()))
4178                  SetDBConnection(); //Emiliano
4179                gltsync = new GL_TIMESYNC(GetRunInfo()->ID_ROOT_L0, "ID", dbc, false); // Emiliano
4180                TrkParams::Set(GetRunInfo(), dbc);
4181                if (dbc){
4182                  dbc->Close(); // Emiliano
4183                  delete dbc;
4184                  dbc=0;
4185                }          
4186                if (gltsync->DBobt(GetRunInfo()->RUNHEADER_OBT) > gltsync->DBobt(GetRunInfo()->RUNTRAILER_OBT)) { // Emiliano
4187                  cout << "Bool_t PamLevel2::UpdateRunInfo(Long64_t iev) -- WARNING -- irun " << irun
4188                       << "  has RUNHEADER_OBT>=RUNTRAILER_OBT " << endl;
4189                  cout
4190                    << "                                                            (NB!! in this case some events could be assigned to a wrong run)"
4191                    << endl;
4192                }
4193              }
4194              //
4195              if (DBG) printf(" found \n");
4196              //          printf(" found \n");//TOGLITOGLI
4197              //
4198              break;
4199            }
4200          } // loop over run
4201          
4202          // --------------------------------------
4203          // if there was no need to update the run
4204          // ---> exit with FALSE
4205          // --------------------------------------
4206          if (irun == oldrun){
4207            if (DBG) printf(" no new run \n");
4208            //        printf(" no new run \n");//TOGLITOGLI
4209            return (false);
4210          }      
4211          // --------------------------------------
4212          // ... otherwise
4213          // ---> exit with TRUE
4214          // --------------------------------------
4215    
4216          if (SELLI != 2) {
4217            /// decrement counters since this event belongs to a new run
4218            if (GetTrigLevel2()) {
4219              totdltime[0] -= GetTrigLevel2()->dltime[0];//live-time
4220              totdltime[1] -= GetTrigLevel2()->dltime[1];//dead-time
4221            }
4222            totdltime[2]--; //event counter
4223            if (DBG) {
4224              cout << endl;
4225              cout << "n.events     : " << totdltime[2] << endl;
4226              cout << "RUN LIVE-TIME: " << totdltime[0] * 0.16 << " ms" << endl;
4227              cout << "RUN DEAD-TIME: " << totdltime[1] * 0.01 << " ms" << endl;
4228            }
4229            // add an entry
4230            if (run_tree_clone && totdltime[2] > 0)
4231              if (run_tree_clone->GetBranch("DeadLiveTime")->GetEntries() < run_tree->GetEntries())
4232                run_tree_clone->GetBranch("DeadLiveTime")->Fill();
4233            // reset counters
4234            if ( totdltime[2] > 0 ){
4235              if (GetTrigLevel2()) {
4236                totdltime[0] = GetTrigLevel2()->dltime[0];//live-time
4237                totdltime[1] = 0; //dead-time
4238              }
4239              totdltime[2] = 1; //event counter
4240            }
4241          }
4242    
4243          if (DBG){
4244            cout << endl << " ))))) UPDATE RUN INFO (((((  @iev " << iev << " run " << GetRunInfo()->ID << " irun " << irun
4245                 << endl;        
4246            printf("2abstime %lld %lld pktnum %d %d obt %lld \n",abstime,prevabstime,pktnum,prevpktnum,obt);
4247            printf("2        rth %d %d nevents %d  \n",GetRunInfo()->RUNHEADER_TIME,GetRunInfo()->RUNTRAILER_TIME,GetRunInfo()->NEVENTS);
4248            printf("2        rto %d %d \n",GetRunInfo()->RUNHEADER_OBT,GetRunInfo()->RUNTRAILER_OBT);
4249            if ( fUseDBinRunInfo ) printf("2        rto2 %lld %lld \n",gltsync->DBobt(GetRunInfo()->RUNHEADER_OBT),gltsync->DBobt(GetRunInfo()->RUNTRAILER_OBT));
4250            printf("2        bo irunentry %lld prevshift %lld irun %lld  \n",irunentry,prevshift,irun);
4251            printf("2        min %lld iev %lld max %lld tot %lld \n",totrunentrymin,iev,totrunentrymax,totrunentry);
4252          }
4253          //        printf("2abstime %lld %lld pktnum %d %d obt %lld \n",abstime,prevabstime,pktnum,prevpktnum,obt);
4254          //        printf("2        rth %d %d nevents %d  \n",GetRunInfo()->RUNHEADER_TIME,GetRunInfo()->RUNTRAILER_TIME,GetRunInfo()->NEVENTS);
4255          //        printf("2        rto %d %d \n",GetRunInfo()->RUNHEADER_OBT,GetRunInfo()->RUNTRAILER_OBT);
4256          //        printf("2        rto2 %lld %lld \n",gltsync->DBobt(GetRunInfo()->RUNHEADER_OBT),gltsync->DBobt(GetRunInfo()->RUNTRAILER_OBT));
4257          //        printf("2        bo irunentry %lld prevshift %lld irun %lld  \n",irunentry,prevshift,irun);
4258          //        printf("2        min %lld iev %lld max %lld tot %lld \n",totrunentrymin,iev,totrunentrymax,totrunentry);//TOGLITOGLI
4259    
4260          return (true);
4261        } // need for run upgrade
4262        if (DBG) printf("return false\n");
4263        return (false);
4264      }// SELLI = 0 SELLI = 2
4265      
4266      // +-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-
4267    // if it is a preselected file (there is SelectionList)    // if it is a preselected file (there is SelectionList)
4268    // NBNB - the event tree MUST be read first    // +-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-
4269    // ----------------------------------------------------    // irun  = run entry relative to the chain
4270    if(SELLI==1){          // irunt = run entry relative to the tree
4271        sel_tree->GetEntry(iev);    if (SELLI == 1) {
4272        if(irun != oldrun){      sel_tree->GetEntry(iev);// read irunt from SelectionList
4273            run->GetEntry(irun);      irun = irunt + irunoffset[sel_tree->GetTreeNumber()];//NEWNEW
4274            return true;      if (irun != oldrun) {
4275          if (irun < run_tree->GetEntries())
4276            run_tree->GetEntry(irun);
4277          // check if the time is ok (with merged files it is not...)
4278          // if not loop over run and look for the proper entry
4279          bool SECONDO_GIRO = false;
4280          //            Long64_t irun_start   = irun;
4281          int offset_start = irunoffset[sel_tree->GetTreeNumber()];
4282          while (((!(abstime >= GetRunInfo()->RUNHEADER_TIME && // check on absolute time (s)
4283              abstime <= GetRunInfo()->RUNTRAILER_TIME)
4284          //                        ||
4285          //                        !(obt >= GetRunInfo()->RUNHEADER_OBT &&         // additional check on OBT (ms)
4286          //                          obt <= GetRunInfo()->RUNTRAILER_OBT)
4287          ) || GetRunInfo()->NEVENTS == 0)
4288          //                && irun < run_tree->GetEntries()
4289          ) {
4290    
4291            if (DBG) {
4292              cout << " (test) ";
4293              cout << " tree " << sel_tree->GetTreeNumber();
4294              cout << " irunt " << irunt;
4295              cout << " offset " << irunoffset[sel_tree->GetTreeNumber()];
4296              cout << " abs " << abstime;
4297              cout << " >> " << GetRunInfo()->RUNHEADER_TIME << " " << GetRunInfo()->RUNTRAILER_TIME;
4298              cout << " obt " << obt;
4299              cout << " >> " << GetRunInfo()->RUNHEADER_OBT << " " << GetRunInfo()->RUNTRAILER_OBT;
4300              cout << " *** JUMP RUN *** irun " << irun;
4301              cout << endl;
4302            }
4303            //              irun++;
4304            irunoffset[sel_tree->GetTreeNumber()]++;
4305            irun = irunt + irunoffset[sel_tree->GetTreeNumber()];//NEWNEW
4306            if (irun == run_tree->GetEntries() && SECONDO_GIRO) {
4307              //            if(irun == irun_start ){
4308              cout << " ...grrrvzzkhhhajsdkj!!!! " << endl;
4309              irunoffset[sel_tree->GetTreeNumber()] = offset_start;
4310              return false;
4311            }
4312            if (irun >= run_tree->GetEntries() || irun < 0) {
4313              cout << "irun = " << irun << " >>  search from the beginning... <<" << endl;
4314              SECONDO_GIRO = true;
4315              irun = 0;
4316              irunoffset[sel_tree->GetTreeNumber()] = -irunt;
4317            }
4318            run_tree->GetEntry(irun);
4319        }        }
4320        return false;  
4321          if (DBG) {
4322            cout << " (test) ";
4323            cout << " tree " << sel_tree->GetTreeNumber();
4324            cout << " irunt " << irunt;
4325            cout << " offset " << irunoffset[sel_tree->GetTreeNumber()];
4326            cout << " abs " << abstime;
4327            cout << " >> " << GetRunInfo()->RUNHEADER_TIME << " " << GetRunInfo()->RUNTRAILER_TIME;
4328            cout << " obt " << obt;
4329            cout << " >> " << GetRunInfo()->RUNHEADER_OBT << " " << GetRunInfo()->RUNTRAILER_OBT;
4330          }
4331          if (DBG)
4332            cout << endl;
4333          if (DBG)
4334            cout << endl << " ))))) UPDATE RUN INFO (((((  @iev " << iev << " run " << GetRunInfo()->ID << " (run-entry "
4335                << irun << ")" << endl;
4336          // ----------------------------------------------------
4337          // update the tracker parameters
4338          // (non ho trovato nessun altro modo sicuro di farlo...)
4339          // ----------------------------------------------------
4340          if ( fUseDBinRunInfo ){
4341            if (!dbc || (dbc && !dbc->IsConnected()))
4342              SetDBConnection();
4343            TrkParams::Set(GetRunInfo(), dbc);
4344            if (dbc){
4345              dbc->Close();
4346              delete dbc;
4347              dbc=0;
4348            }
4349          }
4350          //            cout << endl;
4351          prevshift = 0;
4352          yprevshift = 0;
4353          return true;
4354        }
4355        return false;
4356    }    }
4357    
4358    return false;    return false;
4359    //    //
4360  };  }
4361    
4362  /**  /**
4363   * Update the runinfo informations (to be used to have Run infos event by event basis)   * Update the runinfo informations (to be used to have Run infos event by event basis)
4364   * @param run Pointer to the chain/tree which contains run infos   * @param run Pointer to the chain/tree which contains run infos
4365   * @return true if a new run has been read, false if it is still the same run   * @return true if a new run has been read, false if it is still the same run
4366   */   */
4367  Bool_t PamLevel2::UpdateRunInfo(TTree *run, ULong64_t iev){  Bool_t PamLevel2::UpdateRunInfo(TChain *run, Long64_t iev) {
4368    return(UpdateRunInfo((TChain*)run,iev));    return (UpdateRunInfo(iev));
4369  };  }
4370    
4371    /**
4372     * Update the runinfo informations (to be used to have Run infos event by event basis)
4373     * @param run Pointer to the chain/tree which contains run infos
4374     * @return true if a new run has been read, false if it is still the same run
4375     */
4376    Bool_t PamLevel2::UpdateRunInfo(TTree *run, Long64_t iev) {
4377      return (UpdateRunInfo((TChain*) run, iev));
4378    }
4379    
4380    
4381  //--------------------------------------  //--------------------------------------
4382  //  //
# Line 1615  Bool_t PamLevel2::UpdateRunInfo(TTree *r Line 4384  Bool_t PamLevel2::UpdateRunInfo(TTree *r
4384  //--------------------------------------  //--------------------------------------
4385  /**  /**
4386   * Set which trees shoul be analysed   * Set which trees shoul be analysed
4387   * @param detlist TString containing the sequence of trees required   * @param detlist TString containing the sequence of trees required
4388  */   */
4389  void PamLevel2::SetWhichTrees(TString detlist){  void PamLevel2::SetWhichTrees(TString detlist) {
           
     if(detlist.IsNull() || detlist.Contains("+ALL", TString::kIgnoreCase)){  
         CAL0 = false;  
         CAL1 = true;  
         CAL2 = true;  
         TRK2 = true;  
         TRK1 = false;  
         TRKh = false;  
         TRK0 = false;  
         TRG = true;  
         TOF = true;  
         TOF0 = false;  
         S4  = true;  
         ND  = true;  
         AC  = true;  
         ORB = true;  
     }else if( detlist.Contains("-ALL", TString::kIgnoreCase) ){  
         CAL0 = false;  
         CAL1 = false;  
         CAL2 = false;  
         TRK2 = false;  
         TRK1 = false;  
         TRKh = false;  
         TRK0 = false;  
         TRG = false;  
         TOF = false;  
         TOF0 = false;  
         S4  = false;  
         ND  = false;  
         AC  = false;  
         ORB = false;  
     };  
       
 //  -------------------------------------------------------------------------  
     if( detlist.Contains("CAL1", TString::kIgnoreCase) ){  
         if ( detlist.Contains("-CAL1", TString::kIgnoreCase) )CAL1=false;  
         if ( detlist.Contains("+CAL1", TString::kIgnoreCase) )CAL1=true;  
     };  
4390    
4391      if( detlist.Contains("CAL0", TString::kIgnoreCase) ){    //    if(detlist.IsNull() || detlist.Contains("+ALL", TString::kIgnoreCase)){
4392          if ( detlist.Contains("-CAL0", TString::kIgnoreCase) )CAL0=false;    if (detlist.Contains("+ALL", TString::kIgnoreCase)) {
         if ( detlist.Contains("+CAL0", TString::kIgnoreCase) )CAL0=true;  
     };  
           
     if( detlist.Contains("CAL2", TString::kIgnoreCase)){  
         if ( detlist.Contains("-CAL2", TString::kIgnoreCase) )CAL2=false;  
         if ( detlist.Contains("+CAL2", TString::kIgnoreCase) )CAL2=true;  
     };  
           
     if( detlist.Contains("+CAL", TString::kIgnoreCase) && !CAL1 && !CAL2 )CAL2=true;  
     if( detlist.Contains("-CAL", TString::kIgnoreCase) && CAL1 && CAL2 ){  
         CAL2=false;  
         CAL1=false;  
     }  
 //  -------------------------------------------------------------------------  
     if( detlist.Contains("TRK0", TString::kIgnoreCase) ){  
         if ( detlist.Contains("-TRK0", TString::kIgnoreCase) )TRK0=false;  
         if ( detlist.Contains("+TRK0", TString::kIgnoreCase) )TRK0=true;  
     };  
4393    
4394      if( detlist.Contains("TRK1", TString::kIgnoreCase) ){      cout << " ======================================================== " << endl;
4395          if ( detlist.Contains("-TRK1", TString::kIgnoreCase) )TRK1=false;      cout << "                       (( WARNING ))                      " << endl;
4396          if ( detlist.Contains("+TRK1", TString::kIgnoreCase) )TRK1=true;      cout << " The meaning of the option +ALL has changed!!             " << endl;
4397      };      cout << " Now it includes really all (level0+level1+level2+gpamela)" << endl;
4398                cout << " and the file is discarded if it does not contain         " << endl;
4399      if( detlist.Contains("TRK2", TString::kIgnoreCase)){      cout << " all trees or  if level0 files are not available!!        " << endl;
4400          if ( detlist.Contains("-TRK2", TString::kIgnoreCase) )TRK2=false;      cout << " ======================================================== " << endl;
         if ( detlist.Contains("+TRK2", TString::kIgnoreCase) )TRK2=true;  
     };  
4401    
4402      if( detlist.Contains("TRKh", TString::kIgnoreCase)){      CAL0 = true;
4403          if ( detlist.Contains("-TRKh", TString::kIgnoreCase) )TRKh=false;      CAL1 = true;
4404          if ( detlist.Contains("+TRKh", TString::kIgnoreCase) )TRKh=true;      CAL2 = true;
4405      };      TRK2 = true;
4406                TRK1 = true;
4407      if( detlist.Contains("+TRK", TString::kIgnoreCase) && !TRK1 && !TRK2 && !TRKh )TRK2=true;      TRKh = true;
4408      if( detlist.Contains("-TRK", TString::kIgnoreCase) && TRK1 && TRK2 && TRKh){      TRK0 = true;
4409          TRK2=false;      TRG = true;
4410          TRK1=false;      TOF = true;
4411          TRKh=false;      TOF0 = true;
4412      }      S4 = true;
4413  //  -------------------------------------------------------------------------      ND = true;
4414            AC = true;
4415      if( detlist.Contains("-TRG", TString::kIgnoreCase) )TRG = false;      ORB = true;
4416      else if( detlist.Contains("+TRG", TString::kIgnoreCase) )TRG = true;      GP = true;
4417          }
4418      if( detlist.Contains("-TOF", TString::kIgnoreCase) )TOF = false;    else if (detlist.Contains("-ALL", TString::kIgnoreCase)) {
4419      else if( detlist.Contains("+TOF", TString::kIgnoreCase) )TOF = true;      CAL0 = false;
4420        CAL1 = false;
4421        CAL2 = false;
4422        TRK2 = false;
4423        TRK1 = false;
4424        TRKh = false;
4425        TRK0 = false;
4426        TRG = false;
4427        TOF = false;
4428        TOF0 = false;
4429        S4 = false;
4430        ND = false;
4431        AC = false;
4432        ORB = false;
4433        GP = false;
4434      };
4435    
4436      if( detlist.Contains("-TOF0", TString::kIgnoreCase) )TOF0 = false;    //  -------------------------------------------------------------------------
4437      else if( detlist.Contains("+TOF0", TString::kIgnoreCase) )TOF0 = true;    if (detlist.Contains("CAL1", TString::kIgnoreCase)) {
4438            if (detlist.Contains("-CAL1", TString::kIgnoreCase))
4439      if( detlist.Contains("-S4",  TString::kIgnoreCase) )S4  = false;        CAL1 = false;
4440      else if( detlist.Contains("+S4",  TString::kIgnoreCase) )S4  = true;      if (detlist.Contains("+CAL1", TString::kIgnoreCase))
4441              CAL1 = true;
4442      if( detlist.Contains("-ND",  TString::kIgnoreCase) )ND  = false;    };
     else if( detlist.Contains("+ND",  TString::kIgnoreCase) )ND  = true;  
       
     if( detlist.Contains("-AC",  TString::kIgnoreCase) )AC  = false;  
     else if( detlist.Contains("+AC",  TString::kIgnoreCase) )AC  = true;  
       
     if( detlist.Contains("-ORB", TString::kIgnoreCase) )ORB = false;  
     else if( detlist.Contains("+ORB", TString::kIgnoreCase) )ORB = true;  
4443    
4444  //     cout<< "Set detector list --> ";    if (detlist.Contains("CAL0", TString::kIgnoreCase)) {
4445  //     if(TRK1)cout<<"TRK1 ";      if (detlist.Contains("-CAL0", TString::kIgnoreCase))
4446  //     if(TRK2)cout<<"TRK2 ";        CAL0 = false;
4447  //     if(TRKh)cout<<"TRKH ";      if (detlist.Contains("+CAL0", TString::kIgnoreCase))
4448  //     if(CAL1)cout<<"CAL1 ";        CAL0 = true;
4449  //     if(CAL2)cout<<"CAL2 ";    };
4450  //     if(TOF)cout<<"TOF ";  
4451  //     if(TRG)cout<<"TRG ";    if (detlist.Contains("CAL2", TString::kIgnoreCase)) {
4452  //     if(AC)cout<<"AC ";      if (detlist.Contains("-CAL2", TString::kIgnoreCase))
4453  //     if(ND)cout<<"ND ";        CAL2 = false;
4454  //     if(S4)cout<<"S4 ";      if (detlist.Contains("+CAL2", TString::kIgnoreCase))
4455  //     if(ORB)cout<<"ORB ";        CAL2 = true;
4456  //     cout << endl;    };
4457        
4458  };    if (detlist.Contains("+CAL", TString::kIgnoreCase) && !CAL1 && !CAL2)
4459        CAL2 = true;
4460      if (detlist.Contains("-CAL", TString::kIgnoreCase) && CAL1 && CAL2) {
4461        CAL2 = false;
4462        CAL1 = false;
4463      }
4464      //  -------------------------------------------------------------------------
4465      if (detlist.Contains("TRK0", TString::kIgnoreCase)) {
4466        if (detlist.Contains("-TRK0", TString::kIgnoreCase))
4467          TRK0 = false;
4468        if (detlist.Contains("+TRK0", TString::kIgnoreCase))
4469          TRK0 = true;
4470      };
4471    
4472      if (detlist.Contains("TRK1", TString::kIgnoreCase)) {
4473        if (detlist.Contains("-TRK1", TString::kIgnoreCase))
4474          TRK1 = false;
4475        if (detlist.Contains("+TRK1", TString::kIgnoreCase))
4476          TRK1 = true;
4477      };
4478    
4479      if (detlist.Contains("TRK2", TString::kIgnoreCase)) {
4480        if (detlist.Contains("-TRK2", TString::kIgnoreCase))
4481          TRK2 = false;
4482        if (detlist.Contains("+TRK2", TString::kIgnoreCase))
4483          TRK2 = true;
4484      };
4485    
4486      if (detlist.Contains("TRKh", TString::kIgnoreCase)) {
4487        if (detlist.Contains("-TRKh", TString::kIgnoreCase))
4488          TRKh = false;
4489        if (detlist.Contains("+TRKh", TString::kIgnoreCase))
4490          TRKh = true;
4491      };
4492    
4493      if (detlist.Contains("+TRK", TString::kIgnoreCase) && !TRK1 && !TRK2 && !TRKh)
4494        TRK2 = true;
4495      if (detlist.Contains("-TRK", TString::kIgnoreCase) && TRK1 && TRK2 && TRKh) {
4496        TRK2 = false;
4497        TRK1 = false;
4498        TRKh = false;
4499      }
4500      //  -------------------------------------------------------------------------
4501    
4502      if (detlist.Contains("-TRG", TString::kIgnoreCase))
4503        TRG = false;
4504      else if (detlist.Contains("+TRG", TString::kIgnoreCase))
4505        TRG = true;
4506    
4507      if (detlist.Contains("-TOF", TString::kIgnoreCase))
4508        TOF = false;
4509      else if (detlist.Contains("+TOF", TString::kIgnoreCase))
4510        TOF = true;
4511    
4512      if (detlist.Contains("-TOF0", TString::kIgnoreCase))
4513        TOF0 = false;
4514      else if (detlist.Contains("+TOF0", TString::kIgnoreCase))
4515        TOF0 = true;
4516    
4517      if (detlist.Contains("-S4", TString::kIgnoreCase))
4518        S4 = false;
4519      else if (detlist.Contains("+S4", TString::kIgnoreCase))
4520        S4 = true;
4521    
4522      if (detlist.Contains("-ND", TString::kIgnoreCase))
4523        ND = false;
4524      else if (detlist.Contains("+ND", TString::kIgnoreCase))
4525        ND = true;
4526    
4527      if (detlist.Contains("-AC", TString::kIgnoreCase))
4528        AC = false;
4529      else if (detlist.Contains("+AC", TString::kIgnoreCase))
4530        AC = true;
4531    
4532      if (detlist.Contains("-ORB", TString::kIgnoreCase))
4533        ORB = false;
4534      else if (detlist.Contains("+ORB", TString::kIgnoreCase))
4535        ORB = true;
4536    
4537      if (detlist.Contains("-GP", TString::kIgnoreCase))
4538        GP = false;
4539      else if (detlist.Contains("+GP", TString::kIgnoreCase))
4540        GP = true;
4541    
4542      cout << "tree/branch list from input --> ";
4543      if (TRK0)
4544        cout << "TRK0 ";
4545      if (TRK1)
4546        cout << "TRK1 ";
4547      if (TRK2)
4548        cout << "TRK2 ";
4549      if (TRKh)
4550        cout << "TRKH ";
4551      if (CAL0)
4552        cout << "CAL0 ";
4553      if (CAL1)
4554        cout << "CAL1 ";
4555      if (CAL2)
4556        cout << "CAL2 ";
4557      if (TOF)
4558        cout << "TOF ";
4559      if (TRG)
4560        cout << "TRG ";
4561      if (AC)
4562        cout << "AC ";
4563      if (ND)
4564        cout << "ND ";
4565      if (S4)
4566        cout << "S4 ";
4567      if (ORB)
4568        cout << "ORB ";
4569      if (GP)
4570        cout << "GP ";
4571      cout << endl;
4572      //     cout<< "Set detector list --> ";
4573      //     if(TRK1)cout<<"TRK1 ";
4574      //     if(TRK2)cout<<"TRK2 ";
4575      //     if(TRKh)cout<<"TRKH ";
4576      //     if(CAL1)cout<<"CAL1 ";
4577      //     if(CAL2)cout<<"CAL2 ";
4578      //     if(TOF0)cout<<"TOF0 ";
4579      //     if(TOF)cout<<"TOF ";
4580      //     if(TRG)cout<<"TRG ";
4581      //     if(AC)cout<<"AC ";
4582      //     if(ND)cout<<"ND ";
4583      //     if(S4)cout<<"S4 ";
4584      //     if(ORB)cout<<"ORB ";
4585      //     cout << endl;
4586    
4587    }
4588    ;
4589    
4590  /**  /**
4591   * Set tree/branch detector flags from the content of a tree   * Set tree/branch detector flags from the content of a tree
4592   */   */
4593  void  PamLevel2::GetWhichTrees(TFile* f){  void PamLevel2::GetWhichTrees(TFile* f) {
       
4594    
4595      //    cout << "void  PamLevel2::GetWhichTrees(TFile* f) --- WARNING!! --- ...potrebbe non funzionare "<<endl;
4596      // -----------
4597      // reset flags
4598      // -----------
4599      CAL1 = false;
4600      CAL2 = false;
4601      TRK2 = false;
4602      TRK1 = false;
4603      TRKh = false;
4604      TRG = false;
4605      TOF = false;
4606      S4 = false;
4607      ND = false;
4608      AC = false;
4609      ORB = false;
4610      GP = false;
4611    
4612      RUN = false;
4613    
4614      //    cout << "Checking file: "<<f->GetName()<<endl;
4615      if (!f || f->IsZombie()) {
4616        cout << "File: " << f->GetName() << " Non valid root file" << endl;
4617        fDiscarded = true;
4618        return;
4619      }
4620    
4621      cout << "void  PamLevel2::GetWhichTrees(TFile* f) --- WARNING!! --- ...potrebbe non funzionare "<<endl;    TList *lk = f->GetListOfKeys();
4622      // -----------    if (!lk)
4623      // reset flags      return;
4624      // -----------    TIter next(lk);
4625      CAL1   = false;        TKey *key = 0;
4626      CAL2   = false;      
4627      TRK2   = false;        Int_t nev = 0;
4628      TRK1   = false;      
4629      TRKh   = false;        while ((key = (TKey*) next())) {
4630      TRG    = false;      
4631      TOF    = false;          if (!strcmp(key->GetName(), "Run"))
4632      S4     = false;            RUN = true;
4633      ND     = false;      
4634      AC     = false;          //=========================================================
4635      ORB    = false;          if (!strcmp(key->GetName(), "Trigger")) {
4636              TRG = true;
4637      RUN    = false;        Int_t nevt = ((TTree*) f->Get("Trigger"))->GetEntries();
4638                  if (nev && nevt != nev) {
4639      cout << "Checking file: "<<f->GetName()<<endl;          cout << "File: " << f->GetName() << " Trigger tree has " << nevt << " events instead of " << nev << endl;
4640      if( !f || f->IsZombie() ){          TRG = false;
4641          cout << "File: "<< f->GetName() <<" Non valid root file"<< endl;        }
4642          return;        else
4643            nev = nevt;
4644      }      }
4645        //=========================================================
4646        if (!strcmp(key->GetName(), "ToF")) {
4647          TOF = true;
4648          Int_t nevt = ((TTree*) f->Get("ToF"))->GetEntries();
4649          if (nev && nevt != nev) {
4650            cout << "File: " << f->GetName() << "     ToF tree has " << nevt << " events instead of " << nev << endl;
4651            TOF = false;
4652          }
4653          else
4654            nev = nevt;
4655        }
4656        //=========================================================
4657        if (!strcmp(key->GetName(), "S4")) {
4658          S4 = true;
4659          Int_t nevt = ((TTree*) f->Get("S4"))->GetEntries();
4660          if (nev && nevt != nev) {
4661            cout << "File: " << f->GetName() << "      S4 tree has " << nevt << " events instead of " << nev << endl;
4662            S4 = false;
4663          }
4664          else
4665            nev = nevt;
4666        }
4667        //=========================================================
4668    
4669      TList *lk = f->GetListOfKeys();      if (!strcmp(key->GetName(), "NeutronD")) {
4670      TIter next(lk);        ND = true;
4671      TKey *key =0;        Int_t nevt = ((TTree*) f->Get("NeutronD"))->GetEntries();
4672          if (nev && nevt != nev) {
4673      Int_t nev = 0;          cout << "File: " << f->GetName() << "NeutronD tree has " << nevt << " events instead of " << nev << endl;
4674            ND = false;
4675      while( (key = (TKey*)next()) ){        }
4676                  else
4677          if( !strcmp(key->GetName(),"Run"        ) )RUN = true;          nev = nevt;
4678        }
4679        //=========================================================
4680        if (!strcmp(key->GetName(), "Anticounter")) {
4681          AC = true;
4682          Int_t nevt = ((TTree*) f->Get("Anticounter"))->GetEntries();
4683          if (nev && nevt != nev) {
4684            cout << "File: " << f->GetName() << " Anticounter tree has " << nevt << " events instead of " << nev << endl;
4685            AC = false;
4686          }
4687          else
4688            nev = nevt;
4689        }
4690        //=========================================================
4691        if (!strcmp(key->GetName(), "OrbitalInfo")) {
4692          ORB = true;
4693          Int_t nevt = ((TTree*) f->Get("OrbitalInfo"))->GetEntries();
4694          if (nev && nevt != nev) {
4695            cout << "File: " << f->GetName() << " OrbitalInfo tree has " << nevt << " events instead of " << nev << endl;
4696            ORB = false;
4697          }
4698          else
4699            nev = nevt;
4700        }
4701        //=========================================================
4702        if (!strcmp(key->GetName(), "Tracker")) {
4703          TTree *T = (TTree*) f->Get("Tracker");
4704          for (Int_t i = 0; i < T->GetListOfBranches()->GetEntries(); i++) {
4705            TString name = T->GetListOfBranches()->At(i)->GetName();
4706            if (!name.CompareTo("TrkLevel1"))
4707              TRK1 = true;
4708            if (!name.CompareTo("TrkLevel2"))
4709              TRK2 = true;
4710            if (!name.CompareTo("TrkHough"))
4711              TRKh = true;
4712          };
4713          Int_t nevt = T->GetEntries();
4714          if (nev && nevt != nev) {
4715            cout << "File: " << f->GetName() << " Tracker tree has " << nevt << " events instead of " << nev << endl;
4716            TRK1 = false;
4717            TRK2 = false;
4718            TRKh = false;
4719          }
4720          else
4721            nev = nevt;
4722          //            T->Delete();
4723        };
4724        //=========================================================
4725        if (!strcmp(key->GetName(), "Calorimeter")) {
4726          TTree *T = (TTree*) f->Get("Calorimeter");
4727          for (Int_t i = 0; i < T->GetListOfBranches()->GetEntries(); i++) {
4728            TString name = T->GetListOfBranches()->At(i)->GetName();
4729            if (!name.CompareTo("CaloLevel1"))
4730              CAL1 = true;
4731            if (!name.CompareTo("CaloLevel2"))
4732              CAL2 = true;
4733          };
4734          Int_t nevt = T->GetEntries();
4735          if (nev && nevt != nev) {
4736            cout << "File: " << f->GetName() << "  Calorimeter tree has " << nevt << " events instead of " << nev << endl;
4737            CAL1 = false;
4738            CAL2 = false;
4739          }
4740          else
4741            nev = nevt;
4742          //            T->Delete();
4743        };
4744        //=========================================================
4745        if (!strcmp(key->GetName(), "h20")) {
4746          GP = true;
4747          Int_t nevt = ((TTree*) f->Get("h20"))->GetEntries();
4748          if (nev && nevt != nev) {
4749            cout << "File: " << f->GetName() << " h20 tree has " << nevt << " events instead of " << nev << endl;
4750            GP = false;
4751          }
4752          else
4753            nev = nevt;
4754        }
4755    
4756          //=========================================================        };
         if( !strcmp(key->GetName(),"Trigger"    ) ){  
             TRG = true;  
             Int_t nevt = ((TTree*)f->Get("Trigger"))->GetEntries();  
             if( nev && nevt!=nev){  
                 cout << "File: "<< f->GetName() <<" Trigger tree has "<<nevt<<" events instead of "<<nev<< endl;  
                 TRG = false;  
             }else nev=nevt;  
         }  
         //=========================================================      
         if( !strcmp(key->GetName(),"ToF"        ) ){  
             TOF = true;  
             Int_t nevt = ((TTree*)f->Get("ToF"))->GetEntries();  
             if( nev && nevt!=nev){  
                 cout << "File: "<< f->GetName() <<"     ToF tree has "<<nevt<<" events instead of "<<nev<< endl;  
                 TOF = false;  
             }else nev=nevt;  
         }  
         //=========================================================    
         if( !strcmp(key->GetName(),"S4"         ) ){  
             S4 = true;  
             Int_t nevt = ((TTree*)f->Get("S4"))->GetEntries();  
             if( nev && nevt!=nev){  
                 cout << "File: "<< f->GetName() <<"      S4 tree has "<<nevt<<" events instead of "<<nev<< endl;  
                 S4 = false;  
             }else nev=nevt;  
         }  
         //=========================================================    
4757    
4758          if( !strcmp(key->GetName(),"NeutronD"   ) ){    //    delete lk;
             ND = true;  
             Int_t nevt = ((TTree*)f->Get("NeutronD"))->GetEntries();  
             if( nev && nevt!=nev){  
                 cout << "File: "<< f->GetName() <<"NeutronD tree has "<<nevt<<" events instead of "<<nev<< endl;  
                 ND =false;  
             }else nev=nevt;  
         }        
         //=========================================================    
         if( !strcmp(key->GetName(),"Anticounter") ){  
             AC = true;  
             Int_t nevt = ((TTree*)f->Get("Anticounter"))->GetEntries();  
             if( nev && nevt!=nev){  
                 cout << "File: "<< f->GetName() <<" Anticounter tree has "<<nevt<<" events instead of "<<nev<< endl;  
                 AC =false;  
             }else nev=nevt;  
         }  
         //=========================================================    
         if( !strcmp(key->GetName(),"OrbitalInfo") ){  
             ORB = true;  
             Int_t nevt = ((TTree*)f->Get("OrbitalInfo"))->GetEntries();  
             if( nev && nevt!=nev){  
                 cout << "File: "<< f->GetName() <<" OrbitalInfo tree has "<<nevt<<" events instead of "<<nev<< endl;  
                 ORB = false;  
             }else nev=nevt;  
         }  
         //=========================================================    
         if( !strcmp(key->GetName(),"Tracker"    ) ){  
             TTree *T = (TTree*)f->Get("Tracker");  
             for(Int_t i=0; i<T->GetListOfBranches()->GetEntries(); i++){  
                 TString name = T->GetListOfBranches()->At(i)->GetName();  
                 if( !name.CompareTo("TrkLevel1") )TRK1=true;  
                 if( !name.CompareTo("TrkLevel2") )TRK2=true;  
                 if( !name.CompareTo("TrkHough") )TRKh=true;  
             };        
             Int_t nevt = T->GetEntries();  
             if( nev && nevt!=nev){  
                 cout << "File: "<< f->GetName() <<" Tracker tree has "<<nevt<<" events instead of "<<nev<< endl;  
                 TRK1 = false;  
                 TRK2 = false;  
                 TRKh = false;  
             }else nev=nevt;  
             T->Delete();  
         };  
         //=========================================================    
         if( !strcmp(key->GetName(),"Calorimeter"    ) ){  
             TTree *T = (TTree*)f->Get("Calorimeter");  
             for(Int_t i=0; i<T->GetListOfBranches()->GetEntries(); i++){  
                 TString name = T->GetListOfBranches()->At(i)->GetName();  
                 if( !name.CompareTo("CaloLevel1") )CAL1=true;  
                 if( !name.CompareTo("CaloLevel2") )CAL2=true;  
             };      
             Int_t nevt = T->GetEntries();  
             if( nev && nevt!=nev){  
                 cout << "File: "<< f->GetName() <<"  Calorimeter tree has "<<nevt<<" events instead of "<<nev<< endl;  
                 CAL1 = false;  
                 CAL2 = false;  
             }else nev=nevt;  
             T->Delete();  
         };        
4759    
4760      };    cout << "tree/branch list from file  --> ";
4761          if (TRK1)
4762      delete lk;      cout << "TRK1 ";
4763      if (TRK2)
4764        cout << "TRK2 ";
4765      if (TRKh)
4766        cout << "TRKH ";
4767      if (CAL1)
4768        cout << "CAL1 ";
4769      if (CAL2)
4770        cout << "CAL2 ";
4771      if (TOF)
4772        cout << "TOF ";
4773      if (TRG)
4774        cout << "TRG ";
4775      if (AC)
4776        cout << "AC ";
4777      if (ND)
4778        cout << "ND ";
4779      if (S4)
4780        cout << "S4 ";
4781      if (ORB)
4782        cout << "ORB ";
4783      if (GP)
4784        cout << "GP ";
4785      cout << endl;
4786    
4787  //     cout<< "Get detector list from input file --> ";    return;
 //     if(TRK1)cout<<"TRK1 ";  
 //     if(TRK2)cout<<"TRK2 ";  
 //     if(TRKh)cout<<"TRKH ";  
 //     if(CAL1)cout<<"CAL1 ";  
 //     if(CAL2)cout<<"CAL2 ";  
 //     if(TOF)cout<<"TOF ";  
 //     if(TRG)cout<<"TRG ";  
 //     if(AC)cout<<"AC ";  
 //     if(ND)cout<<"ND ";  
 //     if(S4)cout<<"S4 ";  
 //     if(ORB)cout<<"ORB ";  
 //     cout << endl;  
         
     return ;  
           
 };  
4788    
4789    }
4790    ;
4791    
4792  //--------------------------------------  //--------------------------------------
4793  //  //
# Line 1902  void  PamLevel2::GetWhichTrees(TFile* f) Line 4798  void  PamLevel2::GetWhichTrees(TFile* f)
4798   * @param name File name   * @param name File name
4799   * @return true if the file is ok.   * @return true if the file is ok.
4800   */   */
4801  Bool_t  PamLevel2::CheckLevel2File(TString name){  Bool_t PamLevel2::CheckLevel2File(TString name) {
4802            
4803      Bool_t CAL1__ok   = false;        Bool_t CAL1__ok = false;
4804      Bool_t CAL2__ok   = false;        Bool_t CAL2__ok = false;
4805      Bool_t TRK2__ok   = false;        Bool_t TRK2__ok = false;
4806      Bool_t TRK1__ok   = false;        Bool_t TRK1__ok = false;
4807      Bool_t TRKh__ok   = false;        Bool_t TRKh__ok = false;
4808      Bool_t TRG__ok    = false;        Bool_t TRG__ok = false;
4809      Bool_t TOF__ok    = false;        Bool_t TOF__ok = false;
4810      Bool_t S4__ok     = false;        Bool_t S4__ok = false;
4811      Bool_t ND__ok     = false;        Bool_t ND__ok = false;
4812      Bool_t AC__ok     = false;        Bool_t AC__ok = false;
4813      Bool_t ORB__ok    = false;        Bool_t ORB__ok = false;
4814          Bool_t GP__ok = false;
4815      Bool_t RUN__ok    = false;  
4816          Bool_t RUN__ok = false;
4817      Bool_t SELLI__ok  = false;  
4818      Bool_t SELLI__ok = false;
4819    
4820      //    cout << "Checking file: "<<name<<endl;
4821      TFile *f = new TFile(name.Data());
4822      if (!f || f->IsZombie()) {
4823        cout << "File: " << f->GetName() << " discarded ---- Non valid root file" << endl;
4824        fDiscarded = true;
4825        return false;
4826      }
4827      //    cout << "Get list of keys: "<<f<<endl;
4828      TList *lk = f->GetListOfKeys();
4829      //    lk->Print();
4830      TIter next(lk);
4831      TKey *key = 0;
4832    
4833      Int_t nev = 0;
4834    
4835      while ((key = (TKey*) next())) {
4836    
4837        //  cout << key->GetName() << endl;
4838        //  cout << key->GetName() << ""<<key->GetClassName()<<endl;
4839        //          cout << " Get tree: " << f->Get(key->GetName())<<endl;
4840        //  nev_previous = nev;
4841        //  cout << " n.entries  "<< nev <<endl;
4842        //  if( key->GetClassName()=="TTree" && nev_previous && nev != nev_previous ){
4843        //      nev = ((TTree*)f->Get(key->GetName()))->GetEntries();
4844        //      cout << "File: "<< f->GetName() <<" discarded ---- "<< key->GetName() << " tree: n.entries does not match "<<nev<<" "<<nev_previous<< endl;
4845        //      return false;
4846        //  };
4847    
4848        //=========================================================
4849        // check if the file
4850    
4851    
4852        if (!strcmp(key->GetName(), "Run"))
4853          RUN__ok = true;
4854    
4855        //=========================================================
4856        if (!strcmp(key->GetName(), "SelectionList")) {
4857          SELLI__ok = true;
4858          if (SELLI == 1) {
4859            Int_t nevt = ((TTree*) f->Get("SelectionList"))->GetEntries();
4860            if (nev && nevt != nev) {
4861              cout << "File: " << f->GetName() << " discarded ---- SelectionList tree has " << nevt
4862                  << " events instead of " << nev << endl;
4863              fDiscarded = true;
4864              return false;
4865            }
4866            nev = nevt;
4867          }
4868        }
4869    
4870        //=========================================================
4871        if (!strcmp(key->GetName(), "Trigger")) {
4872          TRG__ok = true;
4873          if (TRG) {
4874            Int_t nevt = ((TTree*) f->Get("Trigger"))->GetEntries();
4875            if (nev && nevt != nev) {
4876              cout << "File: " << f->GetName() << " discarded ---- Trigger tree has " << nevt << " events instead of "
4877                  << nev << endl;
4878              fDiscarded = true;
4879              return false;
4880            }
4881            nev = nevt;
4882          }
4883        }
4884        //=========================================================
4885        if (!strcmp(key->GetName(), "ToF")) {
4886          TOF__ok = true;
4887          if (TOF) {
4888            Int_t nevt = ((TTree*) f->Get("ToF"))->GetEntries();
4889            if (nev && nevt != nev) {
4890              cout << "File: " << f->GetName() << " discarded ---- ToF tree has " << nevt << " events instead of " << nev
4891                  << endl;
4892              fDiscarded = true;
4893              return false;
4894            }
4895            nev = nevt;
4896          }
4897        }
4898        //=========================================================
4899        if (!strcmp(key->GetName(), "S4")) {
4900          S4__ok = true;
4901          if (S4) {
4902            Int_t nevt = ((TTree*) f->Get("S4"))->GetEntries();
4903            if (nev && nevt != nev) {
4904              cout << "File: " << f->GetName() << " discarded ---- S4 tree has " << nevt << " events instead of " << nev
4905                  << endl;
4906              fDiscarded = true;
4907              return false;
4908            }
4909            nev = nevt;
4910          }
4911        }
4912        //=========================================================
4913    
4914      cout << "Checking file: "<<name<<endl;      if (!strcmp(key->GetName(), "NeutronD")) {
4915      TFile *f = new TFile(name.Data());        ND__ok = true;
4916      if( !f || f->IsZombie() ){        if (ND) {
4917          cout << "File: "<< f->GetName() <<" discarded ---- Non valid root file"<< endl; return false;          Int_t nevt = ((TTree*) f->Get("NeutronD"))->GetEntries();
4918      }          if (nev && nevt != nev) {
4919  //    cout << "Get list of keys: "<<f<<endl;            cout << "File: " << f->GetName() << " discarded ---- NeutronD tree has " << nevt << " events instead of "
4920      TList *lk = f->GetListOfKeys();                << nev << endl;
4921  //    lk->Print();            fDiscarded = true;
4922      TIter next(lk);            return false;
4923      TKey *key =0;          }
4924            nev = nevt;
4925          }
4926        }
4927        //=========================================================
4928        if (!strcmp(key->GetName(), "Anticounter")) {
4929          AC__ok = true;
4930          if (AC) {
4931            Int_t nevt = ((TTree*) f->Get("Anticounter"))->GetEntries();
4932            if (nev && nevt != nev) {
4933              cout << "File: " << f->GetName() << " discarded ---- Anticounter tree has " << nevt << " events instead of "
4934                  << nev << endl;
4935              fDiscarded = true;
4936              return false;
4937            }
4938            nev = nevt;
4939          }
4940        }
4941        //=========================================================
4942        if (!strcmp(key->GetName(), "OrbitalInfo")) {
4943          ORB__ok = true;
4944          if (ORB) {
4945            Int_t nevt = ((TTree*) f->Get("OrbitalInfo"))->GetEntries();
4946            if (nev && nevt != nev) {
4947              cout << "File: " << f->GetName() << " discarded ---- OrbitalInfo tree has " << nevt << " events instead of "
4948                  << nev << endl;
4949              fDiscarded = true;
4950              return false;
4951            }
4952            nev = nevt;
4953          }
4954        }
4955        //=========================================================
4956        if (!strcmp(key->GetName(), "Tracker")) {
4957          TTree *T = (TTree*) f->Get("Tracker");
4958          if (TRK1 || TRK2 || TRKh) {
4959            Int_t nevt = T->GetEntries();
4960            if (nev && nevt != nev) {
4961              cout << "File: " << f->GetName() << " discarded ---- Tracker tree has " << nevt << " events instead of "
4962                  << nev << endl;
4963              fDiscarded = true;
4964              return false;
4965            }
4966            nev = nevt;
4967          }
4968          for (Int_t i = 0; i < T->GetListOfBranches()->GetEntries(); i++) {
4969            TString name = T->GetListOfBranches()->At(i)->GetName();
4970            if (!name.CompareTo("TrkLevel1"))
4971              TRK1__ok = true;
4972            if (!name.CompareTo("TrkLevel2"))
4973              TRK2__ok = true;
4974            if (!name.CompareTo("TrkHough"))
4975              TRKh__ok = true;
4976          };
4977          T->Delete();
4978        };
4979        //=========================================================
4980        if (!strcmp(key->GetName(), "Calorimeter")) {
4981          TTree *T = (TTree*) f->Get("Calorimeter");
4982          if (CAL1 || CAL2) {
4983            Int_t nevt = T->GetEntries();
4984            if (nev && nevt != nev) {
4985              cout << "File: " << f->GetName() << " discarded ---- Calorimeter tree has " << nevt << " events instead of "
4986                  << nev << endl;
4987              fDiscarded = true;
4988              return false;
4989            }
4990            nev = nevt;
4991          }
4992          for (Int_t i = 0; i < T->GetListOfBranches()->GetEntries(); i++) {
4993            TString name = T->GetListOfBranches()->At(i)->GetName();
4994            if (!name.CompareTo("CaloLevel1"))
4995              CAL1__ok = true;
4996            if (!name.CompareTo("CaloLevel2"))
4997              CAL2__ok = true;
4998          };
4999          T->Delete();
5000        };
5001        //=========================================================
5002        if (!strcmp(key->GetName(), "h20")) {
5003          ISGP = true;
5004          GP__ok = true;
5005          if (GP) {
5006            Int_t nevt = ((TTree*) f->Get("h20"))->GetEntries();
5007            if (nev && nevt != nev) {
5008              cout << "File: " << f->GetName() << " discarded ---- h20 tree has " << nevt << " events instead of " << nev
5009                  << endl;
5010              fDiscarded = true;
5011              return false;
5012            }
5013            nev = nevt;
5014          }
5015        }
5016    
5017      Int_t nev = 0;    };
5018    
5019      while( (key = (TKey*)next()) ){    if (SELLI == -1)
5020                SELLI = (Int_t) SELLI__ok;
5021  //      cout << key->GetName() << endl;    if (SELLI == 0 && SELLI__ok) {
5022  //      cout << key->GetName() << ""<<key->GetClassName()<<endl;      cout << "File: " << f->GetName() << " discarded ---- found SelectionList (it is not a full-event file)" << endl;
5023  //              cout << " Get tree: " << f->Get(key->GetName())<<endl;      fDiscarded = true;
5024  //      nev_previous = nev;      return false;
5025  //      cout << " n.entries  "<< nev <<endl;    }
5026  //      if( key->GetClassName()=="TTree" && nev_previous && nev != nev_previous ){    if (SELLI == 1 && !SELLI__ok) {
5027  //          nev = ((TTree*)f->Get(key->GetName()))->GetEntries();      cout << "File: " << f->GetName() << " discarded ---- SelectionList missing" << endl;
5028  //          cout << "File: "<< f->GetName() <<" discarded ---- "<< key->GetName() << " tree: n.entries does not match "<<nev<<" "<<nev_previous<< endl;      fDiscarded = true;
5029  //          return false;      return false;
5030  //      };    }
   
   
         if( !strcmp(key->GetName(),"Run"        ) )RUN__ok = true;        
   
         //=========================================================      
         if( !strcmp(key->GetName(),"SelectionList"    ) ){  
             SELLI__ok = true;  
             if(SELLI==1){  
                 Int_t nevt = ((TTree*)f->Get("SelectionList"))->GetEntries();  
                 if( nev && nevt!=nev){  
                     cout << "File: "<< f->GetName() <<" discarded ---- SelectionList tree has "<<nevt<<" events instead of "<<nev<< endl;  
                     return false;  
                 }  
                 nev=nevt;  
             }  
         }  
5031    
5032          //=========================================================        //    cout << "SELLI "<<SELLI<<endl;
         if( !strcmp(key->GetName(),"Trigger"    ) ){  
             TRG__ok = true;  
             if(TRG){  
                 Int_t nevt = ((TTree*)f->Get("Trigger"))->GetEntries();  
                 if( nev && nevt!=nev){  
                     cout << "File: "<< f->GetName() <<" discarded ---- Trigger tree has "<<nevt<<" events instead of "<<nev<< endl;  
                     return false;  
                 }  
                 nev=nevt;  
             }  
         }  
         //=========================================================      
         if( !strcmp(key->GetName(),"ToF"        ) ){  
             TOF__ok = true;  
             if(TOF){  
                 Int_t nevt = ((TTree*)f->Get("ToF"))->GetEntries();  
                 if( nev && nevt!=nev){  
                     cout << "File: "<< f->GetName() <<" discarded ---- ToF tree has "<<nevt<<" events instead of "<<nev<< endl;  
                     return false;  
                 }  
                 nev=nevt;  
             }  
         }  
         //=========================================================    
         if( !strcmp(key->GetName(),"S4"         ) ){  
             S4__ok = true;  
             if(S4){  
                 Int_t nevt = ((TTree*)f->Get("S4"))->GetEntries();  
                 if( nev && nevt!=nev){  
                     cout << "File: "<< f->GetName() <<" discarded ---- S4 tree has "<<nevt<<" events instead of "<<nev<< endl;  
                     return false;  
                 }  
                 nev=nevt;  
             }  
         }  
         //=========================================================    
5033    
5034          if( !strcmp(key->GetName(),"NeutronD"   ) ){    //     cout<< "CheckLevel2File(TString): detector list --> ";
5035              ND__ok = true;    //     if(TRK1__ok)cout<<"TRK1 ";
5036              if(ND){    //     if(TRK2__ok)cout<<"TRK2 ";
5037                  Int_t nevt = ((TTree*)f->Get("NeutronD"))->GetEntries();    //     if(TRKh__ok)cout<<"TRKH ";
5038                  if( nev && nevt!=nev){    //     if(CAL1__ok)cout<<"CAL1 ";
5039                      cout << "File: "<< f->GetName() <<" discarded ---- NeutronD tree has "<<nevt<<" events instead of "<<nev<< endl;    //     if(CAL2__ok)cout<<"CAL2 ";
5040                      return false;    //     if(TOF__ok)cout<<"TOF ";
5041                  }    //     if(TRG__ok)cout<<"TRG ";
5042                  nev=nevt;    //     if(AC__ok)cout<<"AC ";
5043              }    //     if(ND__ok)cout<<"ND ";
5044          }          //     if(S4__ok)cout<<"S4 ";
5045          //=========================================================      //     if(ORB__ok)cout<<"ORB ";
5046          if( !strcmp(key->GetName(),"Anticounter") ){    //     cout << endl;
5047              AC__ok = true;  
5048              if(AC){  
5049                  Int_t nevt = ((TTree*)f->Get("Anticounter"))->GetEntries();    if (TRK2 && TRK1__ok)
5050                  if( nev && nevt!=nev){      TRK1 = 1;
5051                      cout << "File: "<< f->GetName() <<" discarded ---- Anticounter tree has "<<nevt<<" events instead of "<<nev<< endl;    // ----------------------------------------------------------------------------
5052                      return false;    // NOTA
5053                  }    // se c'e` il level1, lo devo necessarimente leggere.
5054                  nev=nevt;    // infatti (non ho capito perche`) i cluster vengono letti e allocati in memoria
5055              }    // comunque, ma non vengono disallocati da PamLevel2::Clear()
5056          }    // ----------------------------------------------------------------------------
5057          //=========================================================    
5058          if( !strcmp(key->GetName(),"OrbitalInfo") ){  
5059              ORB__ok = true;    if (!RUN__ok) {
5060              if(ORB){      cout << "File: " << f->GetName() << " *WARNING* ---- Missing RunInfo tree (NB: RUN infos will not be updated)"
5061                  Int_t nevt = ((TTree*)f->Get("OrbitalInfo"))->GetEntries();          << endl;
5062                  if( nev && nevt!=nev){      RUN = false;
5063                      cout << "File: "<< f->GetName() <<" discarded ---- OrbitalInfo tree has "<<nevt<<" events instead of "<<nev<< endl;    };
                     return false;  
                 }  
                 nev=nevt;  
             }  
         }  
         //=========================================================    
         if( !strcmp(key->GetName(),"Tracker"    ) ){  
             TTree *T = (TTree*)f->Get("Tracker");  
             if(TRK1||TRK2||TRKh){  
                 Int_t nevt = T->GetEntries();  
                 if( nev && nevt!=nev){  
                     cout << "File: "<< f->GetName() <<" discarded ---- Tracker tree has "<<nevt<<" events instead of "<<nev<< endl;  
                     return false;  
                 }  
                 nev=nevt;  
             }  
             for(Int_t i=0; i<T->GetListOfBranches()->GetEntries(); i++){  
                 TString name = T->GetListOfBranches()->At(i)->GetName();  
                 if( !name.CompareTo("TrkLevel1") )TRK1__ok=true;  
                 if( !name.CompareTo("TrkLevel2") )TRK2__ok=true;  
                 if( !name.CompareTo("TrkHough") )TRKh__ok=true;  
             };        
             T->Delete();  
         };  
         //=========================================================    
         if( !strcmp(key->GetName(),"Calorimeter"    ) ){  
             TTree *T = (TTree*)f->Get("Calorimeter");  
             if(CAL1||CAL2){  
                 Int_t nevt = T->GetEntries();  
                 if( nev && nevt!=nev){  
                     cout << "File: "<< f->GetName() <<" discarded ---- Calorimeter tree has "<<nevt<<" events instead of "<<nev<< endl;  
                     return false;  
                 }  
                 nev=nevt;  
             }  
             for(Int_t i=0; i<T->GetListOfBranches()->GetEntries(); i++){  
                 TString name = T->GetListOfBranches()->At(i)->GetName();  
                 if( !name.CompareTo("CaloLevel1") )CAL1__ok=true;  
                 if( !name.CompareTo("CaloLevel2") )CAL2__ok=true;  
             };      
             T->Delete();  
         };        
5064    
5065      };    if (CAL1 && !CAL1__ok) {
5066        cout << "File: " << f->GetName() << " discarded ---- Missing CaloLevel1 branch" << endl;
5067        fDiscarded = true;
5068        return false;
5069      };
5070      if (CAL2 && !CAL2__ok) {
5071        cout << "File: " << f->GetName() << " discarded ---- Missing CaloLevel2 branch" << endl;
5072        fDiscarded = true;
5073        return false;
5074      };
5075      if (TRK2 && !TRK2__ok) {
5076        cout << "File: " << f->GetName() << " discarded ---- Missing TrkLevel2 branch" << endl;
5077        fDiscarded = true;
5078        return false;
5079      };
5080      if (TRK1 && !TRK1__ok) {
5081        cout << "File: " << f->GetName() << " discarded ---- Missing TrkLevel1 branch" << endl;
5082        fDiscarded = true;
5083        return false;
5084      };
5085      if (TRKh && !TRKh__ok) {
5086        cout << "File: " << f->GetName() << " discarded ---- Missing TrkHough branch" << endl;
5087        fDiscarded = true;
5088        return false;
5089      };
5090      if (ORB && !ORB__ok) {
5091        cout << "File: " << f->GetName() << " discarded ---- Missing ORB tree" << endl;
5092        fDiscarded = true;
5093        return false;
5094      };
5095      if (AC && !AC__ok) {
5096        cout << "File: " << f->GetName() << " discarded ---- Missing AC tree" << endl;
5097        fDiscarded = true;
5098        return false;
5099      };
5100      if (S4 && !S4__ok) {
5101        cout << "File: " << f->GetName() << " discarded ---- Missing S4 tree" << endl;
5102        fDiscarded = true;
5103        return false;
5104      };
5105      if (TOF && !TOF__ok) {
5106        cout << "File: " << f->GetName() << " discarded ---- Missing ToF tree" << endl;
5107        fDiscarded = true;
5108        return false;
5109      };
5110    
5111      if( SELLI==-1 )SELLI = (Int_t)SELLI__ok;    if (ND && !ND__ok) {
5112      if( SELLI==0 && SELLI__ok ){      cout << "File: " << f->GetName() << " discarded ---- Missing ND tree" << endl;
5113          cout << "File: "<< f->GetName() <<" discarded ---- found SelectionList (it is not a full-event file)" << endl;      fDiscarded = true;
5114          return false;        return false;
5115      }    };
5116      if( SELLI==1 && !SELLI__ok ){    if (TRG && !TRG__ok) {
5117          cout << "File: "<< f->GetName() <<" discarded ---- SelectionList missing" << endl;      cout << "File: " << f->GetName() << " discarded ---- Missing Trigger tree" << endl;
5118          return false;      fDiscarded = true;
5119      }      return false;
5120          };
5121  //    cout << "SELLI "<<SELLI<<endl;    if (GP && !GP__ok) {
5122        cout << "File: " << f->GetName() << " discarded ---- Missing h20 tree" << endl;
5123        fDiscarded = true;
5124        return false;
5125      };
5126    
5127  //     cout<< "CheckLevel2File(TString): detector list --> ";    //    lk->Delete();
5128  //     if(TRK1__ok)cout<<"TRK1 ";    //    delete lk;
5129  //     if(TRK2__ok)cout<<"TRK2 ";    f->Close();
5130  //     if(TRKh__ok)cout<<"TRKH ";  
5131  //     if(CAL1__ok)cout<<"CAL1 ";    //     cout<< "CheckLevel2File(TString): detector list --> ";
5132  //     if(CAL2__ok)cout<<"CAL2 ";    //     if(TRK1)cout<<"TRK1 ";
5133  //     if(TOF__ok)cout<<"TOF ";    //     if(TRK2)cout<<"TRK2 ";
5134  //     if(TRG__ok)cout<<"TRG ";    //     if(TRKh)cout<<"TRKH ";
5135  //     if(AC__ok)cout<<"AC ";    //     if(CAL1)cout<<"CAL1 ";
5136  //     if(ND__ok)cout<<"ND ";    //     if(CAL2)cout<<"CAL2 ";
5137  //     if(S4__ok)cout<<"S4 ";    //     if(TOF)cout<<"TOF ";
5138  //     if(ORB__ok)cout<<"ORB ";    //     if(TRG)cout<<"TRG ";
5139  //     cout << endl;    //     if(AC)cout<<"AC ";
5140      //     if(ND)cout<<"ND ";
5141      //     if(S4)cout<<"S4 ";
5142      if(TRK2 && TRK1__ok)TRK1=1;    //     if(ORB)cout<<"ORB ";
5143  // ----------------------------------------------------------------------------    //     if(GP)cout<<"GP ";
5144  // NOTA    //     cout << endl;
 // se c'e` il level1, lo devo necessarimente leggere.  
 // infatti (non ho capito perche`) i cluster vengono letti e allocati in memoria  
 // comunque, ma non vengono disallocati da PamLevel2::Clear()  
 // ----------------------------------------------------------------------------  
   
   
     if(!RUN__ok) {  
         cout << "File: "<< f->GetName() <<" *WARNING* ---- Missing RunInfo tree"<< endl;  
 //      return false;  
     };  
   
     if(CAL1 && !CAL1__ok){  
         cout << "File: "<< f->GetName() <<" discarded ---- Missing CaloLevel1 branch"<< endl;  
         return false;  
     };  
     if(CAL2 && !CAL2__ok){  
         cout << "File: "<< f->GetName() <<" discarded ---- Missing CaloLevel2 branch"<< endl;  
         return false;  
     };  
     if(TRK2 && !TRK2__ok){  
         cout << "File: "<< f->GetName() <<" discarded ---- Missing TrkLevel2 branch"<< endl;  
         return false;  
     };  
     if(TRK1 && !TRK1__ok){  
         cout << "File: "<< f->GetName() <<" discarded ---- Missing TrkLevel1 branch"<< endl;  
         return false;  
     };  
     if(TRKh && !TRKh__ok){  
         cout << "File: "<< f->GetName() <<" discarded ---- Missing TrkHough branch"<< endl;  
         return false;  
     };  
     if(ORB && !ORB__ok){  
         cout << "File: "<< f->GetName() <<" discarded ---- Missing ORB tree"<< endl;  
         return false;  
     };  
     if(AC && !AC__ok){  
         cout << "File: "<< f->GetName() <<" discarded ---- Missing AC tree"<< endl;  
         return false;  
     };  
     if(S4 && !S4__ok){  
         cout << "File: "<< f->GetName() <<" discarded ---- Missing S4 tree"<< endl;  
         return false;  
     };  
     if(TOF && !TOF__ok){  
         cout << "File: "<< f->GetName() <<" discarded ---- Missing ToF tree"<< endl;  
         return false;  
     };  
   
     if(ND && !ND__ok){  
         cout << "File: "<< f->GetName() <<" discarded ---- Missing ND tree"<< endl;  
         return false;  
     };  
     if(TRG && !TRG__ok){  
         cout << "File: "<< f->GetName() <<" discarded ---- Missing Trigger tree"<< endl;  
         return false;  
     };  
       
5145    
5146  //    lk->Delete();    return true;
 //    delete lk;  
     f->Close();  
   
 //     cout<< "CheckLevel2File(TString): detector list --> ";  
 //     if(TRK1)cout<<"TRK1 ";  
 //     if(TRK2)cout<<"TRK2 ";  
 //     if(TRKh)cout<<"TRKH ";  
 //     if(CAL1)cout<<"CAL1 ";  
 //     if(CAL2)cout<<"CAL2 ";  
 //     if(TOF)cout<<"TOF ";  
 //     if(TRG)cout<<"TRG ";  
 //     if(AC)cout<<"AC ";  
 //     if(ND)cout<<"ND ";  
 //     if(S4)cout<<"S4 ";  
 //     if(ORB)cout<<"ORB ";  
 //     cout << endl;  
         
     return true;  
           
 };  
5147    
5148    }
5149    ;
5150    
5151  /**  /**
5152   * Create clone-trees   * Create clone-trees
5153   */   */
5154  void PamLevel2::CreateCloneTrees0( TChain *fChain, TFile *ofile ){  void PamLevel2::CreateCloneTrees0(TChain *fChain, TFile *ofile) {
5155    
5156      cout << "+--+--+--+--+--+--+--+--+--+--+--+--+--+--+--+--+--+" <<endl;    cout << "+--+--+--+--+--+--+--+--+--+--+--+--+--+--+--+--+--+" << endl;
5157      cout << "Create clones of PAMELA trees "<<endl;    cout << "Create clones of PAMELA trees " << endl;
5158        
5159      Int_t i=0;    Int_t i = 0;
5160      pam_tree_clone[i] = fChain->GetTree()->CloneTree(0);    pam_tree_clone[i] = fChain->GetTree()->CloneTree(0);
5161      TString name =  pam_tree_clone[i]->GetName();    TString name = pam_tree_clone[i]->GetName();
5162      name.Append("_clone");
5163      //    pam_tree_clone[i]->SetName(name.Data());
5164      cout << pam_tree_clone[i]->GetName() << endl;
5165      i++;
5166    
5167      TList *li = fChain->GetListOfFriends();
5168      TIter next(li);
5169      TFriendElement* T_friend = 0;
5170      ofile->cd();
5171      while ((T_friend = (TFriendElement*) next())) {
5172        //  cout<<T_friend->IsA()->GetName()<<" "<<T_friend->GetName()<<hex << T_friend->GetTree() << dec<<endl;
5173        //  cout<<T_friend->GetTree()->GetName()<< endl;
5174        pam_tree_clone[i] = T_friend->GetTree()->CloneTree(0);
5175        pam_tree_clone[i]->SetAutoSave(1000000);
5176        name = pam_tree_clone[i]->GetName();
5177      name.Append("_clone");      name.Append("_clone");
5178  //    pam_tree_clone[i]->SetName(name.Data());      //  pam_tree_clone[i]->SetName(name.Data());
5179      cout << pam_tree_clone[i]->GetName() <<endl;      cout << pam_tree_clone[i]->GetName() << endl;
5180      i++;      i++;
5181      }
5182    
5183      TList *li = fChain->GetListOfFriends();    delete li;
     TIter next(li);  
     TFriendElement* T_friend=0;  
     ofile->cd();  
     while( (T_friend = (TFriendElement*)next()) ){  
 //      cout<<T_friend->IsA()->GetName()<<" "<<T_friend->GetName()<<hex << T_friend->GetTree() << dec<<endl;  
 //      cout<<T_friend->GetTree()->GetName()<< endl;  
         pam_tree_clone[i] = T_friend->GetTree()->CloneTree(0);  
         pam_tree_clone[i]->SetAutoSave(1000000);  
         name =  pam_tree_clone[i]->GetName();  
         name.Append("_clone");  
 //      pam_tree_clone[i]->SetName(name.Data());  
         cout << pam_tree_clone[i]->GetName() << endl;  
         i++;  
     }  
       
     delete li;  
5184    
5185      cout << "+--+--+--+--+--+--+--+--+--+--+--+--+--+--+--+--+--+" <<endl;    cout << "+--+--+--+--+--+--+--+--+--+--+--+--+--+--+--+--+--+" << endl;
5186    
5187  }  }
5188    
5189  /**  /**
5190   * Create clone-trees   * Create clone-trees
5191   */   */
5192  void PamLevel2::CreateCloneTrees(TFile *ofile){  void PamLevel2::CreateCloneTrees(TFile *ofile) {
5193    
5194      ofile->cd();    //  if the pointer is null, create a default file
5195      if (!run_tree)
5196        return;
5197    
5198      if (!ofile) {
5199        cout << "void PamLevel2::CreateCloneTrees(TFile*) -- WARNING -- Creating file: clone-tree.root " << endl;
5200        ofile = new TFile("clone-tree.root", "recreate");
5201      }
5202    
5203      cout << "+--+--+--+--+--+--+--+--+--+--+--+--+--+--+--+--+--+" <<endl;    ofile->cd();
     cout << "Create new PAMELA trees "<<endl;  
           
5204    
5205      run_tree_clone = new TTree("Run","PAMELA Level2 data from the GL_RUN table ");    cout << "+--+--+--+--+--+--+--+--+--+--+--+--+--+--+--+--+--+" << endl;
5206      run_tree_clone->Branch("RunInfo","GL_RUN",GetPointerTo("RunInfo"));    cout << "Create new PAMELA trees " << endl;
     cout << "Run          : branch RunInfo"<<endl;  
     run_tree_clone->Branch("SoftInfo","SoftInfo",GetPointerTo("SoftInfo"));  
     cout << "Run          : branch SoftInfo"<<endl;  
               
5207    
5208      run_tree_clone = new TTree("Run", "PAMELA Level2 data from the GL_RUN table ");
5209      run_tree_clone->Branch("RunInfo", "GL_RUN", GetPointerTo("RunInfo"));
5210      cout << "Run          : branch RunInfo" << endl;
5211      run_tree_clone->Branch("SoftInfo", "SoftInfo", GetPointerTo("SoftInfo"));
5212      cout << "Run          : branch SoftInfo" << endl;
5213      // ------------------
5214      // replicate run tree
5215      // ------------------
5216      //    cout << "----------------------------------------------------"<<endl;
5217      //    cout << "irun\t | RUN\t NEVENTS\t absolute time"<<endl;
5218      for (Int_t i = 0; i < run_tree->GetEntries(); i++) {
5219        run_tree->GetEntry(i);
5220        //  cout << i<< "\t | "<<GetRunInfo()->ID<<"\t "<<GetRunInfo()->NEVENTS<< "\t "<<GetRunInfo()->RUNHEADER_TIME<<" <---> "<<GetRunInfo()->RUNTRAILER_TIME<<endl;
5221        run_tree_clone->Fill();
5222      }
5223      //
5224      // replicate processinginfo tree
5225      //
5226      if ( PROC ){ // EMEMEM
5227        proc_tree_clone = new TTree("ProcessingInfo","Log of data processing");
5228        proc_tree_clone->Branch("ProcInfo", "ProcInfo", GetPointerTo("ProcInfo"));
5229        cout << "ProcessingInfo: branch ProcessingInfo" << endl;  
5230        // ------------------
5231        // replicate processinginfo tree
5232        // ------------------
5233        //    cout << "----------------------------------------------------"<<endl;
5234        //    cout << "irun\t | RUN\t NEVENTS\t absolute time"<<endl;
5235        for (Int_t i = 0; i < proc_tree->GetEntries(); i++) {
5236          proc_tree->GetEntry(i);
5237          //      cout << i<< "\t | "<<endl;
5238          proc_tree_clone->Fill();
5239        }
5240        if ( SELLI != 2 ){      
5241          proc_obj->runID = 0;
5242          TTimeStamp *dt = new TTimeStamp();
5243          proc_obj->date = dt->AsString();
5244          delete dt;
5245          proc_obj->commandLine = Form("PamelaLevel2 was called: CAL2 %i CAL1 %i CAL0 %i TRK2 %i TRK1 %i TRKh %i TRK0 %i TOF %i TOF0 %i TRG %i \n                                            S4 %i ND %i AC %i ORB %i GP %i EXT %i NUC %i RUN %i ISGP %i SELLI %i \n Custom string   = %s",CAL2,CAL1,CAL0,TRK2,TRK1,TRKh,TRK0,TOF,TOF0,TRG,S4,ND,AC,ORB,GP,EXT,NUC,RUN,ISGP,SELLI,customString.Data());
5246          proc_obj->outputFilename = ofile->GetName();
5247          proc_obj->localDir = gSystem->WorkingDirectory();
5248          proc_obj->uname = gSystem->GetFromPipe("uname -a");
5249          if (!dbc || (dbc && !dbc->IsConnected())) SetDBConnection();
5250          proc_obj->DB = Form("mysql://%s/%s",dbc->GetHost(),dbc->GetDB());
5251          dbc->Close();
5252          proc_tree_clone->Fill();
5253        }
5254        cout << "----------------------------------------------------" << endl;
5255      }
5256      // ------------------------------------
5257      // add branch with dead and live times
5258      // ------------------------------------
5259      if (SELLI != 2) { // EMILIANO
5260        run_tree_clone->Branch("DeadLiveTime", totdltime, "dltime[3]/l");
5261        cout << "Run          : branch DeadLiveTime" << endl;
5262    
5263        sel_tree_clone = new TTree("SelectionList", "List of selected events ");
5264        //    sel_tree_clone->Branch("RunEntry",&irun,"runentry/L");
5265        sel_tree_clone->Branch("RunEntry", &irunt, "runentry/L");//NEWNEW
5266        sel_tree_clone->Branch("EventEntry", &irunentry, "eventry/L");
5267        //    if ( hasL0EE ) sel_tree_clone->Branch("L0EventEntry", &il0entry, "l0eventry/L");
5268      };
5269    
5270      sel_tree_clone = new TTree("SelectionList","List of selected events ");    Int_t i = 0;
5271      sel_tree_clone->Branch("RunEntry",&irun,"runentry/I");    if (TRK1 || TRK2 || TRKh) {
5272      sel_tree_clone->Branch("EventEntry",&irunentry,"eventry/I");      pam_tree_clone[i] = new TTree("Tracker", "PAMELA tracker level2 data ");
5273            if (TRK1) {
5274          pam_tree_clone[i]->Branch("TrkLevel1", "TrkLevel1", GetPointerTo("TrkLevel1"));
5275          pam_tree_clone[i]->BranchRef();
5276          cout << "Tracker      : branch TrkLevel1" << endl;
5277          //            cout << "CreateCloneTrees " << GetTrkLevel1()<<endl;
5278        };
5279        if (TRK2) {
5280          pam_tree_clone[i]->Branch("TrkLevel2", "TrkLevel2", GetPointerTo("TrkLevel2"));
5281          cout << "Tracker      : branch TrkLevel2" << endl;
5282        };
5283        if (TRKh) {
5284          pam_tree_clone[i]->Branch("TrkHough", "TrkHough", GetPointerTo("TrkHough"));
5285          cout << "Tracker      : branch TrkHough" << endl;
5286        };
5287        if(NUC){
5288            pam_tree_clone[i]->Branch("TrackNuclei","TClonesArray",&trk_nuc_obj);
5289            cout << "Tracker      : branch TrackNuclei" << endl;    
5290        }
5291        if(EXT){
5292            pam_tree_clone[i]->Branch("extAlgFlag",&extAlgFlag,"extAlgFlag/I");
5293            pam_tree_clone[i]->Branch("RecoveredTrack","TClonesArray",&trk_ext_obj);
5294            cout << "Tracker      : branch RecoveredTrack" << endl;
5295            if(NUC){
5296                pam_tree_clone[i]->Branch("RecoveredTrackNuclei","TClonesArray",&trk_ext_nuc_obj);
5297                cout << "Tracker      : branch RecoveredTrackNuclei" << endl;                  
5298            }
5299        }
5300    
5301      Int_t i=0;      i++;
5302      if(TRK1||TRK2||TRKh){    }
         pam_tree_clone[i] = new TTree("Tracker","PAMELA tracker level2 data ");  
         if(TRK1) {  
             pam_tree_clone[i]->Branch("TrkLevel1","TrkLevel1", GetPointerTo("TrkLevel1"));  
             pam_tree_clone[i]->BranchRef();  
             cout << "Tracker      : branch TrkLevel1"<<endl;  
             cout << "CreateCloneTrees " << GetTrkLevel1()<<endl;  
         };  
         if(TRK2) {  
             pam_tree_clone[i]->Branch("TrkLevel2", "TrkLevel2",GetPointerTo("TrkLevel2"));  
             cout << "Tracker      : branch TrkLevel2"<<endl;          
         };  
         if(TRKh) {  
             pam_tree_clone[i]->Branch("TrkHough","TrkHough", GetPointerTo("TrkHough"));  
             cout << "Tracker      : branch TrkHough"<<endl;  
         };  
         i++;  
     }  
   
     // Calorimeter  
     if(CAL1||CAL2){  
         pam_tree_clone[i] = new TTree("Calorimeter","PAMELA calorimeter level2 data ");  
         if(CAL1) {  
             pam_tree_clone[i]->Branch("CaloLevel1", "CaloLevel1", GetPointerTo("CaloLevel1"));  
             cout << "Calorimeter  : branch CaloLevel1"<<endl;  
         };  
         if(CAL2) {  
             pam_tree_clone[i]->Branch("CaloLevel2","CaloLevel2", GetPointerTo("CaloLevel2"));  
             cout << "Calorimeter  : branch CaloLevel2"<<endl;  
         };  
         i++;  
     }      
   
     // ToF      
     if(TOF) {  
         pam_tree_clone[i] = new TTree("ToF","PAMELA ToF level2 data ");  
         pam_tree_clone[i]->Branch("ToFLevel2","ToFLevel2", GetPointerTo("ToFLevel2"));  
         cout << "ToF          : branch ToFLevel2"<<endl;  
         i++;  
     };  
     // Trigger  
     if(TRG) {  
         pam_tree_clone[i] = new TTree("Trigger","PAMELA trigger level2 data ");  
         pam_tree_clone[i]->Branch("TrigLevel2","TrigLevel2", GetPointerTo("TrigLevel2"));  
         cout << "Trigger      : branch TrigLevel2"<<endl;  
         i++;  
     };  
     // S4  
     if(S4) {  
         pam_tree_clone[i] = new TTree("S4","PAMELA S4 level2 data ");    
         pam_tree_clone[i]->Branch("S4Level2","S4Level2", GetPointerTo("S4Level2"));  
         cout << "S4           : branch S4Level2"<<endl;  
         i++;  
     };  
     // Neutron Detector  
     if(ND) {  
         pam_tree_clone[i] = new TTree("NeutronD","PAMELA neutron detector level2 data ");        
         pam_tree_clone[i]->Branch("NDLevel2","NDLevel2", GetPointerTo("NDLevel2"));  
         cout << "NeutronD     : branch NDLevel2"<<endl;  
         i++;  
     };  
     // Anticounters  
     if(AC) {  
         pam_tree_clone[i] = new TTree("Anticounter","PAMELA anticounter detector level2 data ");          
         pam_tree_clone[i]->Branch("AcLevel2","AcLevel2", GetPointerTo("AcLevel2"));  
         cout << "Anticounter  : branch AcLevel2"<<endl;  
         i++;  
     };  
     // OrbitalInfo  
     if(ORB) {  
         pam_tree_clone[i] = new TTree("OrbitalInfo","PAMELA oribital info  ");    
         pam_tree_clone[i]->Branch("OrbitalInfo","OrbitalInfo", GetPointerTo("OrbitalInfo"));  
         cout << "OrbitalInfo  : branch OrbitalInfo"<<endl;  
         i++;  
     };  
     cout << "+--+--+--+--+--+--+--+--+--+--+--+--+--+--+--+--+--+" <<endl;  
5303    
5304  }    // Calorimeter
5305      if (CAL1 || CAL2) {
5306        pam_tree_clone[i] = new TTree("Calorimeter", "PAMELA calorimeter level2 data ");
5307        if (CAL1) {
5308          pam_tree_clone[i]->Branch("CaloLevel1", "CaloLevel1", GetPointerTo("CaloLevel1"));
5309          cout << "Calorimeter  : branch CaloLevel1" << endl;
5310        };
5311        if (CAL2) {
5312          pam_tree_clone[i]->Branch("CaloLevel2", "CaloLevel2", GetPointerTo("CaloLevel2"));
5313          cout << "Calorimeter  : branch CaloLevel2" << endl;
5314        };
5315        if(NUC){
5316            pam_tree_clone[i]->Branch("TrackNuclei","TClonesArray",&calo_nuc_obj);
5317            cout << "Calorimeter  : branch TrackNuclei" << endl;    
5318        }
5319        if(EXT){
5320            pam_tree_clone[i]->Branch("RecoveredTrack","TClonesArray",&calo_ext_obj);
5321            cout << "Calorimeter  : branch RecoveredTrack" << endl;
5322            if(NUC){
5323                pam_tree_clone[i]->Branch("RecoveredTrackNuclei","TClonesArray",&calo_ext_nuc_obj);
5324                cout << "Calorimeter  : branch RecoveredTrackNuclei" << endl;                  
5325            }
5326        }
5327        i++;
5328      }
5329    
5330      // ToF
5331      if (TOF) {
5332        pam_tree_clone[i] = new TTree("ToF", "PAMELA ToF level2 data ");
5333        pam_tree_clone[i]->Branch("ToFLevel2", "ToFLevel2", GetPointerTo("ToFLevel2"));
5334        cout << "ToF          : branch ToFLevel2" << endl;
5335        if(NUC){
5336            pam_tree_clone[i]->Branch("TrackNuclei","TClonesArray",&tof_nuc_obj);
5337            cout << "ToF          : branch TrackNuclei" << endl;    
5338        }
5339        if(EXT){
5340            pam_tree_clone[i]->Branch("RecoveredTrack","TClonesArray",&tof_ext_obj);
5341            cout << "ToF          : branch RecoveredTrack" << endl;
5342            if(NUC){
5343                pam_tree_clone[i]->Branch("RecoveredTrackNuclei","TClonesArray",&tof_ext_nuc_obj);
5344                cout << "ToF          : branch RecoveredTrackNuclei" << endl;                  
5345            }
5346        }
5347        i++;
5348      };
5349      // Trigger
5350      if (TRG) {
5351        pam_tree_clone[i] = new TTree("Trigger", "PAMELA trigger level2 data ");
5352        pam_tree_clone[i]->Branch("TrigLevel2", "TrigLevel2", GetPointerTo("TrigLevel2"));
5353        cout << "Trigger      : branch TrigLevel2" << endl;
5354        i++;
5355      };
5356      // S4
5357      if (S4) {
5358        pam_tree_clone[i] = new TTree("S4", "PAMELA S4 level2 data ");
5359        pam_tree_clone[i]->Branch("S4Level2", "S4Level2", GetPointerTo("S4Level2"));
5360        cout << "S4           : branch S4Level2" << endl;
5361        i++;
5362      };
5363      // Neutron Detector
5364      if (ND) {
5365        pam_tree_clone[i] = new TTree("NeutronD", "PAMELA neutron detector level2 data ");
5366        pam_tree_clone[i]->Branch("NDLevel2", "NDLevel2", GetPointerTo("NDLevel2"));
5367        cout << "NeutronD     : branch NDLevel2" << endl;
5368        i++;
5369      };
5370      // Anticounters
5371      if (AC) {
5372        pam_tree_clone[i] = new TTree("Anticounter", "PAMELA anticounter detector level2 data ");
5373        pam_tree_clone[i]->Branch("AcLevel2", "AcLevel2", GetPointerTo("AcLevel2"));
5374        cout << "Anticounter  : branch AcLevel2" << endl;
5375        i++;
5376      };
5377      // OrbitalInfo
5378      if (ORB) {
5379        pam_tree_clone[i] = new TTree("OrbitalInfo", "PAMELA orbital info  ");
5380        pam_tree_clone[i]->Branch("OrbitalInfo", "OrbitalInfo", GetPointerTo("OrbitalInfo"));
5381        cout << "OrbitalInfo  : branch OrbitalInfo" << endl;
5382        if(NUC){
5383            pam_tree_clone[i]->Branch("TrackNuclei","TClonesArray",&orb_nuc_obj);
5384            cout << "OrbitalInfo  : branch TrackNuclei" << endl;    
5385        }
5386        if(EXT){
5387            pam_tree_clone[i]->Branch("RecoveredTrack","TClonesArray",&orb_ext_obj);
5388            cout << "OrbitalInfo  : branch RecoveredTrack" << endl;
5389            if(NUC){
5390                pam_tree_clone[i]->Branch("RecoveredTrackNuclei","TClonesArray",&orb_ext_nuc_obj);
5391                cout << "OrbitalInfo  : branch RecoveredTrackNuclei" << endl;                  
5392            }
5393        }
5394        i++;
5395      };
5396      // GPamela
5397      if (GP) {
5398        pam_tree_clone[i] = new TTree("h20", "GPAMELA info ");
5399        pam_tree_clone[i]->Branch("GPamela", "GPamela", GetPointerTo("GPamela"), 32000, 1);//split
5400        cout << "GPamela  : branch GPamela" << endl;
5401        i++;
5402      };
5403    
5404    
5405      cout << "+--+--+--+--+--+--+--+--+--+--+--+--+--+--+--+--+--+" << endl;
5406    
5407    }
5408    
5409  /**  /**
5410   * Fill tree (created with CreateCloneTrees)   * Fill tree (created with CreateCloneTrees)
5411   *   *
5412   */   */
5413  //void PamLevel2::FillNewPamTree(TTree *T){  //void PamLevel2::FillNewPamTree(TTree *T){
5414  void PamLevel2::FillCloneTrees(){  void PamLevel2::FillCloneTrees() {
       
 //    cout << "PamLevel2::FillCloneTrees()" << irunentry << endl;  
5415    
5416      for(Int_t i=0; i<NCLONES; i++){    //    cout << "PamLevel2::FillCloneTrees()" << irunentry << endl;
         if(pam_tree_clone[i])pam_tree_clone[i]->Fill();  
     }  
     if(sel_tree_clone)sel_tree_clone->Fill();      
5417    
5418  }    for (Int_t i = 0; i < NCLONES; i++) {
5419        if (pam_tree_clone[i])
5420          pam_tree_clone[i]->Fill();
5421      }
5422      if (sel_tree_clone)
5423        sel_tree_clone->Fill();
5424    
5425    }
5426    
5427  TTree* PamLevel2::GetCloneTree(TString name){  TTree* PamLevel2::GetCloneTree(TString name) {
5428    
5429      for(Int_t i=0; i<NCLONES; i++){        for (Int_t i = 0; i < NCLONES; i++) {
5430          if(pam_tree_clone[i]){      if (pam_tree_clone[i]) {
5431              TString na = pam_tree_clone[i]->GetName();        TString na = pam_tree_clone[i]->GetName();
5432              if(!name.CompareTo(na))return pam_tree_clone[i];        if (!name.CompareTo(na))
5433          };          return pam_tree_clone[i];
5434      }      };
5435      if(run_tree_clone){    }
5436          TString na = run_tree_clone->GetName();    if (run_tree_clone) {
5437          if(!name.CompareTo(na))return run_tree_clone;      TString na = run_tree_clone->GetName();
5438      }      if (!name.CompareTo(na))
5439      if(sel_tree_clone){        return run_tree_clone;
5440          TString na = sel_tree_clone->GetName();    }
5441          if(!name.CompareTo(na))return sel_tree_clone;    if (sel_tree_clone) {
5442      }      TString na = sel_tree_clone->GetName();
5443      return NULL;      if (!name.CompareTo(na))
5444          return sel_tree_clone;
5445      }
5446      if (proc_tree_clone && PROC) {
5447        TString na = proc_tree_clone->GetName();
5448        if (!name.CompareTo(na))
5449          return proc_tree_clone;
5450      }
5451      return NULL;
5452    
5453  }  }
5454  void PamLevel2::WriteCloneTrees(){  void PamLevel2::WriteCloneTrees() {
5455      cout << "+--+--+--+--+--+--+--+--+--+--+--+--+--+--+--+--+--+" <<endl;    cout << "+--+--+--+--+--+--+--+--+--+--+--+--+--+--+--+--+--+" << endl;
5456      cout << "Write clones of PAMELA trees "<<endl;    cout << "Write clones of PAMELA trees " << endl;
5457      cout << run_tree_clone->GetName()<<endl;        cout << run_tree_clone->GetName() << endl;
5458      run_tree_clone->Write();    if (SELLI != 2) {// Emiliano
5459      cout << sel_tree_clone->GetName()<<endl;          if (run_tree_clone->GetBranch("DeadLiveTime")->GetEntries() < run_tree->GetEntries())
5460          run_tree_clone->GetBranch("DeadLiveTime")->Fill();
5461      };
5462      run_tree_clone->Write();
5463      if (SELLI != 2) { //Emiliano
5464        cout << sel_tree_clone->GetName() << endl;
5465      sel_tree_clone->Write();      sel_tree_clone->Write();
5466      for(Int_t i=0; i<NCLONES; i++){        };
5467          if(pam_tree_clone[i]){    for (Int_t i = 0; i < NCLONES; i++) {
5468              cout << pam_tree_clone[i]->GetName()<<endl;      if (pam_tree_clone[i]) {
5469              pam_tree_clone[i]->Write();        cout << pam_tree_clone[i]->GetName() << endl;
5470          };        pam_tree_clone[i]->Write(pam_tree_clone[i]->GetName(),TObject::kOverwrite);
5471      }      };
5472      cout << "+--+--+--+--+--+--+--+--+--+--+--+--+--+--+--+--+--+" <<endl;    }
5473      
5474      if ( PROC ){//EMEMEMEM
5475        proc_tree_clone->Write("ProcessingInfo",TObject::kOverwrite);
5476      }
5477      cout << "+--+--+--+--+--+--+--+--+--+--+--+--+--+--+--+--+--+" << endl;
5478    
5479  }  }
5480    
5481  /**  /**
5482   * Method to get level2-trees entry, the corresponding run entry and (if required) the level0 entry.   * Method to get level2-trees entry, the corresponding run entry and (if required) the level0 entry.
5483   */   */
5484  Int_t PamLevel2::GetEntry(Int_t iee){  Int_t PamLevel2::GetEntry(Long64_t iee) {
       
     if(!pam_tree){  
         cout << " Int_t PamLevel2::GetEntry(Int_t) -- ERROR -- level2 trees not loaded"<<endl;  
         return 0;  
     }  
5485    
5486      if (!pam_tree) {
5487        cout << " Int_t PamLevel2::GetEntry(Int_t) -- ERROR -- level2 trees not loaded" << endl;
5488        return 0;
5489      }
5490    
5491      //    //
5492      // This is a sort of bug: if you don't have the run tree you don't want to exit here you want to have loaded the event anyway...    // This is a sort of bug: if you don't have the run tree you don't want to exit here you want to have loaded the event anyway...
5493      //    //
5494      //    if(!run_tree ){    //    if(!run_tree ){
5495      //  cout << " Int_t PamLevel2::GetEntry(Int_t) -- ERROR -- run tree not loeaded"<<endl;    //    cout << " Int_t PamLevel2::GetEntry(Int_t) -- ERROR -- run tree not loeaded"<<endl;
5496      //  return 0;    //    return 0;
5497      //    }    //    }
5498    
5499      Int_t ii=0;    //-------------------------------
5500      //-------------------------------    if (!pam_tree->GetEntry(iee)) {
5501      ii = iee;      cout << " Int_t PamLevel2::GetEntry(Int_t) -- ERROR -- error reading pam tree" << endl;
5502      if( !pam_tree->GetEntry(ii) ) return 0;      return 0;
5503      }
5504      //    //
5505      // ... that's way I put it here. Notice that nothing change in the code (is backward compatible) since in any case you return with 0.    // ... that's way I put it here. Notice that nothing change in the code (is backward compatible) since in any case you return with 0.
5506      // in theory one would like to return 1 if run is not loaded but now I don't have the will to add that 2 lines of code and it is not    // in theory one would like to return 1 if run is not loaded but now I don't have the will to add that 2 lines of code and it is not
5507      // a problem if you don't check the return code of getentry.    // a problem if you don't check the return code of getentry.
5508      //    //
5509      if(!run_tree ){    if (!RUN || !run_tree) {
5510          if ( TRK0 || CAL0 || TOF0 || RUN ) { //forse cosi` va bene per tornare 1?      if (TRK0 || CAL0 || TOF0 || RUN) { //forse cosi` va bene per tornare 1?
5511                  cout << " Int_t PamLevel2::GetEntry(Int_t) -- ERROR -- run tree not loaded"<<endl;        cout << " Int_t PamLevel2::GetEntry(Int_t) -- ERROR -- run tree not loaded" << endl;
5512                  return 0;        return 0;
         }  else {  
                 return 1; //cosi` se non c'e` run esce qua...  
         }  
5513      }      }
5514        else {
5515          return 1; //cosi` se non c'e` run esce qua...
5516        }
5517      }
5518    
5519      //-------------------------------    //-------------------------------
5520      ii = iee;    //
5521      Bool_t UPDATED = UpdateRunInfo(run_tree,ii);    if ( fUpdateRunInfo ) UpdateRunInfo(iee); // Emiliano
5522      if(SELLI==0)irunentry = iee-runfirstentry;    if (SELLI == 0 || SELLI == 2) irunentry = iee - runfirstentry;
     if(UPDATED && run_tree_clone)run_tree_clone->Fill();  
   
 //    cout << "PamLevel2::GetEntry("<<iee<<") "<<irun<<" "<<runfirstentry<<" "<<irunentry<<endl;  
5523    
5524      if( TRK0 || CAL0 || TOF0 )GetYodaEntry( );    return 1;
5525    
5526      return 1;  }
5527    
5528    TrkLevel0 *PamLevel2::GetTrkLevel0() {
5529      if (!TRK0)
5530        return NULL;
5531      if (!GetYodaEntry()) {
5532        cout << " Int_t PamLevel2::GetTrkLevel0() -- ERROR -- error reading level0 tree" << endl;
5533        return 0;
5534      }
5535      return trk0_obj;
5536    }
5537    ;
5538    CaloLevel0 *PamLevel2::GetCaloLevel0() {
5539      if (!CAL0)
5540        return NULL;
5541      if (!GetYodaEntry()) {
5542        cout << " Int_t PamLevel2::GetCaloLevel0() -- ERROR -- error reading level0 tree" << endl;
5543        return 0;
5544      }
5545      return calo0_obj;
5546  }  }
5547    ;
5548    
5549  /**  /**
5550   * Method to retrieve the level0 tree (YODA tree) that contains the current event.   * Method to retrieve the level0 tree (YODA tree) that contains the current event.
# Line 2440  Int_t PamLevel2::GetEntry(Int_t iee){ Line 5552  Int_t PamLevel2::GetEntry(Int_t iee){
5552   * @return Pointer to the tree   * @return Pointer to the tree
5553   */   */
5554    
5555    TTree* PamLevel2::GetYodaTree() {
5556    
5557  TTree* PamLevel2::GetYodaTree( ){    //    cout << "TTree* PamLevel2::GetYodaTree( )"<<endl;
5558          //===================================
5559  //    cout << "TTree* PamLevel2::GetYodaTree( )"<<endl;    // check if iroot has changed
5560      //===================================    //===================================
5561      // check if iroot has changed    if (irun < 0) {
5562      //===================================      cout << "PamLevel2::GetYodaTree() -- ERROR -- irun = " << irun << endl;
5563      if( irun<0 ){      if (DBG) cout << "In order to use this method you have to first load the RunInfo tree "<<endl;
5564          cout << "PamLevel2::GetYodaTree() -- ERROR "<<endl;      return NULL;
5565          cout << "In order to use this method you have to load the RunInfo tree "<<endl;    }
5566          cout << "with the method TChain* PamLevel2::GetRunTree(TString, TString)"<<endl;    Int_t irootnew = GetRunInfo()->ID_ROOT_L0;
5567  //      cout << " - read the event with PamLevel2::GetEntry(Int_t)"<<endl;    if (DBG){
5568          return NULL;      cout << "iroot    "<<iroot<<endl;
5569      }          cout << "irootnew "<<irootnew<<endl;
5570      Int_t irootnew = run_obj->ID_ROOT_L0;    }
 //     cout << "iroot    "<<iroot<<endl;  
 //     cout << "irootnew "<<irootnew<<endl;  
5571    
5572      //===================================
5573      // load the level0 file
5574      // (if not already loaded)
5575      //===================================
5576      if (iroot != irootnew || !l0_tree) {
5577        iroot = irootnew;
5578      //===================================      //===================================
5579      // load the level0 file      // open the DB connection
5580      // (if not already loaded)      // (if not already opened)
5581      //===================================      //===================================
5582      if( iroot != irootnew || !l0_tree){      if (!dbc || (dbc && !dbc->IsConnected()))
5583          iroot = irootnew;        SetDBConnection();
5584          //===================================      GL_ROOT glroot = GL_ROOT();
5585          // open the DB connection      if (glroot.Query_GL_ROOT(iroot, dbc)) {
5586          // (if not already opened)        cout << "TTree* PamLevel2::GetYodaTree( ) -- ERROR -- level0 file iroot = " << iroot << " does not exists"
5587          //===================================            << endl;
5588          if(!dbc || (dbc && !dbc->IsConnected())){        return NULL;
5589              cout<<"~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~"<<endl;      };
5590              cout<<"Connecting to DB"<<endl;      TString filename = glroot.PATH + glroot.NAME;
5591              cout<<"HOST "<<host<<endl;      if (l0_file) {
5592              cout<<"USER "<<user<<endl;        l0_file->Close();
5593              cout<<"PSW  "<<psw<<endl;        l0_file->Delete();
5594              dbc = TSQLServer::Connect(host.Data(),user.Data(),psw.Data());      }
5595              if( !dbc )return NULL;      cout << "Opening LEVEL0 file: " << filename << endl;
5596              if( !dbc->IsConnected() )return NULL;          FileStat_t t;
5597  //          cout<<"...done"<<endl;      if (gSystem->GetPathInfo(filename.Data(), t)) {
5598              cout<<"~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~"<<endl;        cout << " PamLevel2::GetYodaTree() -- ERROR opening file " << endl;
5599          }else{        return NULL;
5600  //          cout<<"DB already connected"<<endl;      }
5601          }      l0_file = new TFile(filename);
5602          GL_ROOT glroot = GL_ROOT();      if (!l0_file)
5603          if( glroot.Query_GL_ROOT(iroot,dbc) ){        return NULL;
5604              cout << "TTree* PamLevel2::GetYodaTree( ) -- ERROR -- level0 file iroot = "<<iroot<< " does not exists"<<endl;      l0_tree = (TTree*) l0_file->Get("Physics");
5605              return NULL;      if (!h0_obj)
5606          };        h0_obj = new EventHeader();
5607          TString filename = glroot.PATH + glroot.NAME;      l0_tree->SetBranchAddress("Header", &h0_obj);
5608          if(l0_file){      yprevshift = 0; // yes, yprevshift is the shift in the level0, prevshift is the shift in the level2
5609              l0_file->Close();      //---------------------------------------------------
5610              l0_file->Delete();      // TRACKER:
5611          }      if (TRK0) {
5612          cout << "Opening LEVEL0 file: "<< filename << endl;        if (!trk0_obj) {
5613          FileStat_t t;          trk0_obj = new TrkLevel0();
5614          if( gSystem->GetPathInfo(filename.Data(),t) ){          trk0_obj->Set();
5615              cout << " PamLevel2::GetYodaTree() -- ERROR opening file "<<endl;        };
5616              return NULL;        l0_tree->SetBranchAddress("Tracker", trk0_obj->GetPointerToTrackerEvent());
5617          }      }
5618          l0_file = new TFile(filename);      //--------------------------------------------------
5619          if( !l0_file )return NULL;      // CALORIMETER:
5620          l0_tree = (TTree*)l0_file->Get("Physics");      if (CAL0) {
5621          if(!h0_obj)h0_obj = new EventHeader();        if (!calo0_obj) {
5622          l0_tree->SetBranchAddress("Header" ,&h0_obj);          calo0_obj = new CaloLevel0();
5623          prevshift = 0;          calo0_obj->Set();
5624          //---------------------------------------------------        };
5625          // TRACKER:        l0_tree->SetBranchAddress("Calorimeter", calo0_obj->GetPointerToCalorimeterEvent());
5626          if(TRK0){      }
5627              if(!trk0_obj){      //---------------------------------------------------
5628                  trk0_obj = new TrkLevel0();      // TOF:
5629                  trk0_obj->Set();      if (TOF0) {
5630              };        cout << "PamLevel2::GetYodaTree() --- level0 TOF not implemented " << endl;
             l0_tree->SetBranchAddress("Tracker" ,trk0_obj->GetPointerToTrackerEvent());  
         }  
         //---------------------------------------------------  
         // CALORIMETER:  
         if(CAL0){  
             if(!calo0_obj){  
                 calo0_obj = new CaloLevel0();  
                 calo0_obj->Set();  
             };  
             l0_tree->SetBranchAddress("Calorimeter" ,calo0_obj->GetPointerToCalorimeterEvent());  
             //      cout << "PamLevel2::GetYodaTree() --- level0 calorimeter not implemented "<<endl;  
         }  
         //---------------------------------------------------  
         // TOF:  
         if(TOF0){  
             cout << "PamLevel2::GetYodaTree() --- level0 TOF not implemented "<<endl;  
         }  
   
     };  
   
     if(!dbc || (dbc && !dbc->IsConnected())){  
         cout << " TTree* PamLevel2::GetYodaTree( ) -- no DB connected... hai fatto qualche cazzata "<<endl;  
5631      }      }
5632    
5633      if ( TRK0 ) TrkParams::SetCalib(run_obj,dbc);      dbc->Close(); // EMILIANO, do not leave open connections, open only when needed
5634        delete dbc;
5635        dbc=0;
5636    
5637  //    cout << l0_tree << endl;    };
       
     return l0_tree;  
5638    
5639      if (TRK0) {
5640        if(!dbc || (dbc && !dbc->IsConnected()))SetDBConnection();
5641        TrkParams::SetCalib(run_obj, dbc);
5642        TrkParams::LoadCalib();
5643        if (!TrkParams::CalibIsLoaded()) {
5644          cout << " TTree* PamLevel2::GetYodaTree( ) -- WARNING -- Calibration not loaded" << endl;
5645        };
5646        if(dbc){
5647          dbc->Close(); // EMILIANO, do not leave open connections, open only when needed
5648          delete dbc;
5649          dbc=0;
5650        };
5651      }
5652      return l0_tree;
5653  }  }
5654    
5655  /**  /**
5656   * Method to retrieve the level0 tree (YODA tree) that contains the current event.   * Method to retrieve the level0 tree (YODA tree) that contains the current event.
5657   */   */
5658  Int_t PamLevel2::GetYodaEntry(){  Int_t PamLevel2::GetYodaEntry() {
5659    
5660  //    cout << "Int_t PamLevel2::GetYodaEntry()"<<endl;    Long64_t iev = this->GetReadEntry();
5661      if(!GetYodaTree())return 0;  
5662          // +-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-
5663      // patch    // if it is a full file (not preselected)
5664      if( (Int_t)irunentry < 0){    // +-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-
5665          cout << "Int_t PamLevel2::GetYodaEntry() -- ATTENZIONE -- irunentry negativo?!?! "<<(Int_t)irunentry<<endl;    //  if (SELLI == 0 || SELLI == 2 || !hasL0EE) {
5666          irunentry=0;  
5667        if (!GetYodaTree()){
5668          printf(" PamLevel2::GetYodaEntry() : ERROR no level0 file loaded!\n");
5669          return 0;
5670        }
5671    
5672        if (irunentry < 0) {
5673          if (DBG) cout << "Int_t PamLevel2::GetYodaEntry() -- ATTENZIONE -- irunentry negativo?!?! "<<(Int_t)irunentry<<endl;
5674          //      cout << "Int_t PamLevel2::GetYodaEntry() -- ATTENZIONE -- irunentry negativo?!?! "<<(Int_t)irunentry<<endl; // TOGLITOGLI
5675          irunentry = 0LL;
5676      }      }
5677      //  ---------------------------------      //  ---------------------------------
5678      //  if file is NOT a preselected file      //  if file is NOT a preselected file
5679      //  ---------------------------------      //  ---------------------------------
5680      UInt_t quellagiusta = irunentry + run_obj->EV_FROM;      Long64_t quellagiusta = irunentry + (Long64_t)(run_obj->EV_FROM); // prevshift already included in irunentry
       
5681    
5682  //     cout << " irun "<< irun << " irunentry "<< irunentry<<" run_obj->EV_FROM "<<run_obj->EV_FROM <<" quella giusta "<<quellagiusta << endl;      if (DBG){
5683  //     cout << " iroot "<<iroot<<" run_obj->ID_ROOT_L0 "<<run_obj->ID_ROOT_L0<<endl;        cout << " irun "<< irun << " irunentry "<< irunentry<<" run_obj->EV_FROM "<<run_obj->EV_FROM <<" quella giusta "<<quellagiusta << endl;
5684  //     cout << " time "<< GetOrbitalInfo()->absTime << endl;        cout << " iroot "<<iroot<<" run_obj->ID_ROOT_L0 "<<run_obj->ID_ROOT_L0<<endl;
5685  //     cout << " trk_calib_used "<<run_obj->TRK_CALIB_USED<< endl;        cout << " time "<< abstime << endl;
5686            }
5687      if( !GetOrbitalInfo() ){  
5688          cout << "Int_t PamLevel2::GetYodaEntry() -- ERROR -- missing OrbitalInfo "<<endl;      ULong64_t obt = 0;
5689          return 0;      ULong64_t pktn = 0;
5690        if (GetOrbitalInfo()) {
5691          obt = GetOrbitalInfo()->OBT;
5692          pktn = GetOrbitalInfo()->pkt_num;
5693        }
5694    
5695        if (!GetOrbitalInfo() && !ISGP) {
5696          cout << "Int_t PamLevel2::GetYodaEntry() -- ERROR -- missing OrbitalInfo " << endl;
5697          return 0;
5698        }
5699        if (obt == 0 && pktn == 0 && !ISGP) {
5700          cout << "Int_t PamLevel2::GetYodaEntry() -- ERROR -- level2 event corrupted ?? " << endl;
5701          return 0;
5702      }      }
5703    
5704      // ---------------------------------------------------------------------      // ---------------------------------------------------------------------
# Line 2584  Int_t PamLevel2::GetYodaEntry(){ Line 5712  Int_t PamLevel2::GetYodaEntry(){
5712      // of the OBT and pkt-number. In case of mismatch, the level0 entry number      // of the OBT and pkt-number. In case of mismatch, the level0 entry number
5713      // is shift forward until when the packets match.      // is shift forward until when the packets match.
5714      // ---------------------------------------------------------------------      // ---------------------------------------------------------------------
5715      Int_t answer = 0;      Long64_t shift = 0LL;
5716      Int_t shift =0;      Long64_t answer = quellagiusta + shift + yprevshift;
5717      //    printf(" siamo qui %i %i \n",shift,prevshift);      Int_t readl0 = 0;
5718      do{      readl0 = l0_tree->GetEntry(answer); // prevshift already included in irunentry
5719          if(shift>0){      
5720            cout << " level0 <--> level2 mismatch ( irun "<<irun<<" irunentry "<<irunentry<<" shift "<<shift<<" )"<<endl;      if (DBG){
5721          }        printf(" siamo qui shift %lld yprevshift %lld answer %lld \n",shift,yprevshift,answer);
5722          answer = l0_tree->GetEntry(quellagiusta+shift+prevshift);      }
5723          shift++;  
5724          if( !GetEventHeader() ){  
5725              cout << "Int_t PamLevel2::GetYodaEntry() -- ERROR -- missing EventHeader "<<endl;      if (ISGP) {
5726              return 0;        obt = (UInt_t)(GetEventHeader()->GetPscuHeader()->GetOrbitalTime()); //BARBATRUCCO
5727          }        pktn = (UInt_t)(GetEventHeader()->GetPscuHeader()->GetCounter()); //BARBATRUCCO
5728  //      if( (quellagiusta+shift) == l0_tree->GetEntries()+1 )cout << ">>> end of level0 tree <<<"<<endl;      }
5729  //      cout << " GetOrbitalInfo()->OBT "<< GetOrbitalInfo()->OBT << endl;  
5730  //      cout << " GetEventHeader()->GetPscuHeader()->GetOrbitalTime() "<< GetEventHeader()->GetPscuHeader()->GetOrbitalTime() << endl;      while ( (obt != (UInt_t)(GetEventHeader()->GetPscuHeader()->GetOrbitalTime()) || pktn != (UInt_t)(GetEventHeader()->GetPscuHeader()->GetCounter())) && (quellagiusta + (Long64_t) shift) < GetYodaTree()->GetEntries() && shift < maxshift ){
5731  //      cout << " GetOrbitalInfo()->pkt_num "<< GetOrbitalInfo()->pkt_num << endl;        if ( isSync && shift == 0LL ){
5732  //      cout << " GetEventHeader()->GetPscuHeader()->GetCounter() "<< GetEventHeader()->GetPscuHeader()->GetCounter() << endl;          printf(" PamLevel2::GetYodaEntry() ERROR! sync file but the level0 entry not found in place!!! \n");
5733  //      printf(" IDRUN %u \n",GetRunInfo()->ID);          cout << " OK this is a bug, write to Emiliano, Emiliano.Mocchiutti@ts.infn.it " << endl;
5734  //          cout << "\nFor bug reporting instructions, please see for example:\n";
5735          if ( prevshift != 0 && (quellagiusta+shift) == GetYodaTree()->GetEntries() ){          cout << "     <http://www.ts.infn.it/~mocchiut/bugs/bugs.html>.\n";
5736            prevshift = 0;          cout << "  " << endl;
5737            shift = -1;        }
5738          };        if (shift > 0) {
5739            if (DBG) cout << " PKTNUM  L2 --- " << pktn << " --- L0 --- " << GetEventHeader()->GetPscuHeader()->GetCounter() << endl;
5740      }while( ( GetOrbitalInfo()->OBT != (UInt_t)(GetEventHeader()->GetPscuHeader()->GetOrbitalTime()) || GetOrbitalInfo()->pkt_num != (UInt_t)(GetEventHeader()->GetPscuHeader()->GetCounter())) && (quellagiusta+shift) < GetYodaTree()->GetEntries() );          if (DBG)
5741              cout << "         RUN: ID " << GetRunInfo()->ID << " ID_ROOT_L0 " << run_obj->ID_ROOT_L0 << " ID_RUN_FRAG "
5742      if ( (quellagiusta+shift) == GetYodaTree()->GetEntries() ) cout << " Big trouble here, no such event in Level0 data! " <<endl;                 << GetRunInfo()->ID_RUN_FRAG << " EV_FROM " << GetRunInfo()->EV_FROM << endl;
5743            if (DBG)
5744  //    cout << "LA ENTRY GIUSTA E`: "<<quellagiusta<<" (spero...)"<<endl;            cout << "         L2 <--> L0 mismatch ( irun " << irun << " irunentry " << irunentry << " shift " << shift
5745  //    return GetYodaTree()->GetEntry(quellagiusta);                 << " prevshift " << prevshift << " )" << endl;
5746      if ( shift > 1 ) prevshift += (shift-1);        }
5747              answer = quellagiusta +  shift+ yprevshift;
5748      return answer;        readl0 = l0_tree->GetEntry(answer);
5749          //      printf(" inside while shift %lld yprevshift %lld answer %lld \n",shift,yprevshift,answer);//TOGLITOGLI
5750    
5751          if (!GetEventHeader()) {
5752            cout << "Int_t PamLevel2::GetYodaEntry() -- ERROR -- missing EventHeader " << endl;
5753            return 0;
5754          }
5755    
5756          //
5757          if (yprevshift != 0 && (quellagiusta + (Long64_t) shift) == GetYodaTree()->GetEntries()) {
5758            if (DBG) printf(" reset inside while shift %lld yprevshift %lld answer %lld \n",shift,yprevshift,answer);
5759            //        printf(" reset inside while shift %lld yprevshift %lld answer %lld \n",shift,yprevshift,answer);//TOGLITOGLI
5760            yprevshift = 0LL;
5761            shift = -1LL;
5762          };
5763            
5764          shift++;
5765        }
5766                                      
5767    
5768        if ( obt != (UInt_t)(GetEventHeader()->GetPscuHeader()->GetOrbitalTime()) || pktn != (UInt_t)(GetEventHeader()->GetPscuHeader()->GetCounter()) ){
5769          if ( isSync ){
5770            printf(" PamLevel2::GetYodaEntry() ERROR! sync file but the level0 entry not found AT ALL!!! \n");
5771            cout << " OK this is a bug, write to Emiliano, Emiliano.Mocchiutti@ts.infn.it " << endl;
5772            cout << "\nFor bug reporting instructions, please see for example:\n";
5773            cout << "     <http://www.ts.infn.it/~mocchiut/bugs/bugs.html>.\n";
5774            cout << "  " << endl;
5775          }
5776          cout << "Int_t PamLevel2::GetYodaEntry() -- WARNING -- " << endl;
5777          cout << " Big trouble here, no such event in Level0 data! (NB maxshift set to " << maxshift << " )" << endl;    
5778          cout << " Nested and/or DarthVader skipped packets in fragmented run? checking and trying to fix " <<endl;
5779          // query the DB for runs containing the event, loop over LEVEL0 files which could contain the level0 event and try to find it
5780          // ma nel mezzo del cammin per ogni run che pesco devo vedere la posizione relativa di iev rispetto al runheader nel livello2 per andare a cercare nel posto giusto
5781          // connect to db
5782          if (!dbc || (dbc && !dbc->IsConnected())) SetDBConnection(); //Emiliano
5783          //
5784          if (GetOrbitalInfo()){
5785            abstime = GetOrbitalInfo()->absTime;
5786          } else {
5787            printf(" PamLevel2::GetYodaEntry() ERROR! no OrbitalInfo, cannot get the absolute time for event \n");
5788            return 0;
5789          }
5790          // query DB looking for runs containing the processed event
5791          TSQLResult *pResult;
5792          TSQLRow *Row = NULL;
5793          TString myquery = Form("select ID,NEVENTS from GL_RUN where RUNHEADER_TIME<=%lld and RUNTRAILER_TIME>=%lld;",abstime,abstime);
5794          if ( DBG ) printf(" query is %s \n",myquery.Data());
5795          //      printf(" query is %s \n",myquery.Data());// TOGLITOGLI
5796          pResult = dbc->Query(myquery.Data());    
5797          if (!pResult->GetRowCount()){
5798            printf(" PamLevel2::GetYodaEntry() ERROR! event is not included in any run!!! \n");
5799            cout << " OK this is a bug, write to Emiliano, Emiliano.Mocchiutti@ts.infn.it " << endl;
5800            cout << "\nFor bug reporting instructions, please see for example:\n";
5801            cout << "     <http://www.ts.infn.it/~mocchiut/bugs/bugs.html>.\n";
5802            cout << "  " << endl;
5803            return 0;
5804          }
5805          if ( pResult->GetRowCount() == 1 ){
5806            if (DBG) printf(" PamLevel2::GetYodaEntry() - WARNING - YodaEntry not found but only one run containing the event, it should not happen \n");
5807            //        printf(" PamLevel2::GetYodaEntry() - WARNING - YodaEntry not found but only one run containing the event, it should not happen \n");//TOGLITOGLI
5808          }
5809          for( Int_t ru=0; ru < pResult->GetRowCount(); ru++){ // loop over runs containing the event
5810            if (Row) delete Row;
5811            Row = pResult->Next();  
5812            if( Row == NULL ) break;
5813            UInt_t idrun = (UInt_t)atoll(Row->GetField(0));
5814            UInt_t nev = (UInt_t)atoll(Row->GetField(1));
5815            if (DBG) printf(" inside loop over runs: ru %i idrun %i nev %i \n",ru,idrun,nev);
5816            //        printf(" inside loop over runs: ru %i idrun %i nev %i \n",ru,idrun,nev);//TOGLITOGLI
5817    
5818            // now look for this run in the level2 file, it must be present! code is taken from updateruninfo of course
5819            Bool_t rfound = false;
5820            totrunentry = 0LL;
5821            runfirstentry = 0LL;
5822            for (Int_t r=0; r< run_tree->GetEntries();r++){
5823              run_tree->GetEntry(r);//update runinfo
5824              if ( r > 0 ){
5825                totrunentrymin = totrunentrymax+1;
5826              } else {
5827                totrunentrymin = 0LL;
5828              }
5829              totrunentry += GetRunInfo()->NEVENTS;
5830              totrunentrymax = totrunentry - 1 - prevshift; // prevshift is needed to handle nested+DV_skipped packets
5831              irun = r;        
5832    
5833              if (idrun == GetRunInfo()->ID){
5834                if ( totrunentrymin > iev ){ // there is a shift (nested+DV_skipped packets)
5835                  if (DBG) printf("PamLevel2::GetYodaEntry - unconsistent iev - nevents, probable DBL0-L2 async\n");
5836                  if (DBG) printf("PamLevel2::GetYodaEntry - totrunentrymin %lld iev %lld prevshift %lld totrunentrymax %lld \n",totrunentrymin,iev,prevshift,totrunentrymax);
5837                  //              printf("PamLevel2::GetYodaEntry - unconsistent iev - nevents, probable DBL0-L2 async\n");
5838                  //              printf("PamLevel2::GetYodaEntry - totrunentrymin %lld iev %lld prevshift %lld totrunentrymax %lld \n",totrunentrymin,iev,prevshift,totrunentrymax);//TOGLITOGLI
5839                  prevshift += (totrunentrymin-iev); // add the new shift to total shift
5840                  totrunentrymin -= (totrunentrymin-iev); // shift run position min
5841                  totrunentrymax -= (totrunentrymin-iev); // shift run position max
5842                  if (DBG) printf("PamLevel2::GetYodaEntry - totrunentrymin %lld iev %lld prevshift %lld totrunentrymax %lld \n",totrunentrymin,iev,prevshift,totrunentrymax);
5843                  //              printf("PamLevel2::GetYodaEntry - totrunentrymin %lld iev %lld prevshift %lld totrunentrymax %lld \n",totrunentrymin,iev,prevshift,totrunentrymax);//TOGLITOGLI
5844                }
5845                runfirstentry = totrunentrymin; // first entry of the run in the level2
5846              
5847    
5848                //
5849                if (gltsync)
5850                  delete gltsync; // Emiliano
5851                if (!dbc || (dbc && !dbc->IsConnected()))
5852                  SetDBConnection(); //Emiliano
5853                gltsync = new GL_TIMESYNC(GetRunInfo()->ID_ROOT_L0, "ID", dbc, false); // Emiliano
5854                if (dbc){
5855                  dbc->Close(); // Emiliano
5856                  delete dbc;
5857                  dbc=0;
5858                }          
5859                if (gltsync->DBobt(GetRunInfo()->RUNHEADER_OBT) > gltsync->DBobt(GetRunInfo()->RUNTRAILER_OBT)) { // Emiliano
5860                  cout << "Bool_t PamLevel2::UpdateRunInfo(Long64_t iev) -- WARNING -- irun " << irun
5861                       << "  has RUNHEADER_OBT>=RUNTRAILER_OBT " << endl;
5862                  cout
5863                    << "                                                            (NB!! in this case some events could be assigned to a wrong run)"
5864                    << endl;
5865                }
5866                //
5867                if (DBG) printf(" found \n");
5868                //            printf(" found \n");//TOGLITOGLI
5869                rfound = true;
5870                //
5871                break;
5872              }
5873            } // loop over run
5874            if ( !rfound ){
5875              printf(" PamLevel2::GetYodaEntry() ERROR! run is not present in the level2 file!!! \n");
5876              cout << " OK this is a bug, write to Emiliano, Emiliano.Mocchiutti@ts.infn.it " << endl;
5877              cout << "\nFor bug reporting instructions, please see for example:\n";
5878              cout << "     <http://www.ts.infn.it/~mocchiut/bugs/bugs.html>.\n";
5879              cout << "  " << endl;        
5880              return 0;
5881            }
5882    
5883            // here we got the first run and we can check if it contains the level0 event
5884            if (!GetYodaTree()){
5885              printf(" PamLevel2::GetYodaEntry() : ERROR no level0 file loaded!\n");
5886              return 0;
5887            }      
5888    
5889            // get the current run entry
5890            irunentry = iev - runfirstentry;
5891            if (irunentry < 0) {
5892              if (DBG) cout << "Int_t PamLevel2::GetYodaEntry() -- ATTENZIONE -- irunentry negativo?!?! "<<(Int_t)irunentry<<endl;
5893              //          cout << "Int_t PamLevel2::GetYodaEntry() -- ATTENZIONE -- irunentry negativo?!?! "<<(Int_t)irunentry<<endl; // TOGLITOGLI
5894              irunentry = 0LL;
5895            }
5896            //  ---------------------------------
5897            //  if file is NOT a preselected file
5898            //  ---------------------------------
5899            quellagiusta = irunentry + (Long64_t)(run_obj->EV_FROM); // prevshift already included in irunentry
5900          
5901            if (DBG){
5902              cout << " irun "<< irun << " irunentry "<< irunentry<<" run_obj->EV_FROM "<<run_obj->EV_FROM <<" quella giusta "<<quellagiusta << endl;
5903              cout << " iroot "<<iroot<<" run_obj->ID_ROOT_L0 "<<run_obj->ID_ROOT_L0<<endl;
5904              cout << " time "<< abstime << endl;
5905            }
5906            //        cout << " irun "<< irun << " irunentry "<< irunentry<<" run_obj->EV_FROM "<<run_obj->EV_FROM <<" quella giusta "<<quellagiusta << endl;
5907            //        cout << " iroot "<<iroot<<" run_obj->ID_ROOT_L0 "<<run_obj->ID_ROOT_L0<<endl;
5908            //        cout << " time "<< abstime << endl; // TOGLITOGLI
5909          
5910            shift = 0;
5911            answer = quellagiusta + shift + yprevshift; // prevshift already included in irunentry
5912            readl0 = l0_tree->GetEntry(answer); // prevshift already included in irunentry
5913    
5914            if (DBG){
5915              printf(" siamo qua shift %lld yprevshift %lld answer %lld \n",shift,yprevshift,answer);
5916            }
5917            //        printf(" siamo qua shift %lld yprevshift %lld answer %lld \n",shift,yprevshift,answer);//TOGLITOGLI
5918          
5919            while ( (obt != (UInt_t)(GetEventHeader()->GetPscuHeader()->GetOrbitalTime()) || pktn != (UInt_t)(GetEventHeader()->GetPscuHeader()->GetCounter())) && (quellagiusta + (Long64_t) shift) < GetYodaTree()->GetEntries() && shift < maxshift ){
5920              if (shift > 0) {
5921                if (DBG) cout << " PKTNUM  L2 --- " << pktn << " --- L0 --- " << GetEventHeader()->GetPscuHeader()->GetCounter() << endl;
5922                if (DBG)
5923                  cout << "         RUN: ID " << GetRunInfo()->ID << " ID_ROOT_L0 " << run_obj->ID_ROOT_L0 << " ID_RUN_FRAG "
5924                       << GetRunInfo()->ID_RUN_FRAG << " EV_FROM " << GetRunInfo()->EV_FROM << endl;
5925                if (DBG)
5926                  cout << "         L2 <--> L0 mismatch ( irun " << irun << " irunentry " << irunentry << " shift " << shift
5927                       << " prevshift " << prevshift << " )" << endl;
5928              }
5929              answer = quellagiusta +  shift+ yprevshift;
5930              readl0 = l0_tree->GetEntry(answer);
5931              //          printf(" inside inside while shift %lld yprevshift %lld answer %lld \n",shift,yprevshift,answer);//TOGLITOGLI
5932            
5933              if (!GetEventHeader()) {
5934                cout << "Int_t PamLevel2::GetYodaEntry() -- ERROR -- missing EventHeader " << endl;
5935                return 0;
5936              }
5937              //
5938              if (yprevshift != 0 && (quellagiusta + (Long64_t) shift) == GetYodaTree()->GetEntries()) {
5939                if (DBG) printf(" reset inside while shift %lld yprevshift %lld answer %lld \n",shift,yprevshift,answer);
5940                //            printf(" reset inside while shift %lld yprevshift %lld answer %lld \n",shift,yprevshift,answer);//TOGLITOGLI
5941                yprevshift = 0;
5942                shift = -1;
5943              };
5944            
5945              shift++;
5946            }
5947          
5948            if ( obt != (UInt_t)(GetEventHeader()->GetPscuHeader()->GetOrbitalTime()) || pktn != (UInt_t)(GetEventHeader()->GetPscuHeader()->GetCounter()) ){
5949              //still not the good run... continue with the nex one!
5950              printf("still not the good run... continue with the nex one!\n");
5951            } else {
5952              if (DBG) cout << "LA ENTRY GIUSTA E`: "<<quellagiusta<<" (spero...)"<<endl;
5953              //          cout << "LA ENTRY GIUSTA E`: "<<answer<<" (spero...)"<<endl;//TOGLITOGLI
5954              if (shift > 1) yprevshift = (shift - 1);
5955              if (Row) delete Row;
5956              delete pResult;  
5957              if (dbc){
5958                dbc->Close(); // Emiliano
5959                delete dbc;
5960                dbc=0;
5961              }    
5962              il0entry = answer;
5963              return readl0;
5964            }
5965            // perhaps it is all
5966          }// loop over runs containing the event
5967          if (Row) delete Row;
5968          delete pResult;  
5969          if (dbc){
5970            dbc->Close(); // Emiliano
5971            delete dbc;
5972            dbc=0;
5973          }          
5974          // arriving here it means no run found, cannot be! error!
5975          printf(" PamLevel2::GetYodaEntry() ERROR! run is not present in the level0 files!!! \n");
5976          cout << " OK this is a bug, write to Emiliano, Emiliano.Mocchiutti@ts.infn.it " << endl;
5977          cout << "\nFor bug reporting instructions, please see for example:\n";
5978          cout << "     <http://www.ts.infn.it/~mocchiut/bugs/bugs.html>.\n";
5979          cout << "  " << endl;        
5980          return 0;
5981        } else {
5982          if (DBG) cout << "=> LA ENTRY GIUSTA E`: "<<answer<<" (spero...)"<<endl;
5983          //    cout << "=> LA ENTRY GIUSTA E`: "<<answer<<" (spero...)"<<endl;
5984          //    printf("obt %lld (UInt_t)(GetEventHeader()->GetPscuHeader()->GetOrbitalTime()) %i  pktn %lld (UInt_t)(GetEventHeader()->GetPscuHeader()->GetCounter() %i \n",obt,(UInt_t)(GetEventHeader()->GetPscuHeader()->GetOrbitalTime()), pktn, (UInt_t)(GetEventHeader()->GetPscuHeader()->GetCounter()) );
5985          if (shift > 1) yprevshift = (shift - 1);
5986          il0entry = answer;
5987          return readl0;
5988        }
5989    
5990        /*  } // if selli 0 || 2
5991      if ( SELLI == 1 && hasL0EE ){
5992        sel_tree->GetEntry(iev);  
5993        Long64_t answer = il0entry;
5994        Int_t readl0 = 0;
5995        readl0 = l0_tree->GetEntry(answer);
5996        return readl0;
5997        }*/
5998      printf(" PamLevel2::GetYodaEntry() ERROR! \n");
5999      cout << " Entry not found! OK this is a bug, write to Emiliano, Emiliano.Mocchiutti@ts.infn.it " << endl;
6000      cout << "\nFor bug reporting instructions, please see for example:\n";
6001      cout << "     <http://www.ts.infn.it/~mocchiut/bugs/bugs.html>.\n";
6002      cout << "  " << endl;
6003      return 0;
6004    }
6005    
6006    /**
6007     * \Brief Set DB connection
6008     */
6009    Bool_t PamLevel2::SetDBConnection() {
6010    
6011      //    cout << "PamLevel2::SetDBConnection()" << endl;
6012      if (DBG) {
6013        cout << "~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~" << endl;
6014        cout << "Connecting to DB" << endl;
6015        cout << "HOST " << host << endl;
6016        cout << "USER " << user << endl;
6017        cout << "PSW  " << psw << endl;
6018      }
6019      Bool_t notconn = true;
6020      Int_t trials = 0;
6021      while ( notconn && trials < 10 ){
6022        //    gSystem->Sleep(500);
6023        dbc = TSQLServer::Connect(host.Data(), user.Data(), psw.Data());
6024        //dbc->Connect(host.Data(), user.Data(), psw.Data());
6025        if ( dbc ) notconn = false;
6026        if (DBG) printf("<%i> test connection...\n ",trials);
6027        if (!dbc){
6028          if (DBG) printf(" :( failed, no pointer \n");
6029          notconn = true;
6030          //      return false;
6031        };
6032        if (dbc && !dbc->IsConnected()){
6033          if (DBG) printf(" :( failed, no connection \n");
6034          notconn = true;
6035          //      return false;
6036        };
6037        trials++;
6038      };
6039      if ( notconn ) return false;
6040      //
6041      if (DBG) printf("=connected!\n");
6042      stringstream myquery; // EMILIANO
6043      myquery.str(""); // EMILIANO
6044      myquery << "SET time_zone='+0:00'"; // EMILIANO
6045      dbc->Query(myquery.str().c_str()); // EMILIANO
6046      if ( DBG ) printf("~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~\n");
6047      return true;
6048    
6049    }
6050    
6051    /**
6052     * \Brief Add a friend to the pamela chain.
6053     * @param cname name of the chain to be added
6054     */
6055    
6056    TChain* PamLevel2::AddFriend(TString cname) {
6057    
6058      if (!GetPamTree()) {
6059        cout << " TChain* PamLevel2::AddFriend(TString cname) --- a pamela tree must be created first" << endl;
6060        return NULL;
6061      }
6062    
6063      TChain *c = new TChain(cname.Data());
6064    
6065      TIter next(GetPamTree()->GetListOfFiles());
6066      Int_t nf = 0;
6067      TChainElement* element = 0;
6068      while ((element = (TChainElement*) next())) {
6069        c->Add(element->GetTitle());
6070        nf++;
6071      }
6072    
6073      GetPamTree()->AddFriend(cname.Data());
6074    
6075      cout << "external chain created and added to pamela friends :" << cname << endl;
6076      cout << "n.files " << nf << endl;
6077    
6078      return c;
6079    
6080  }  }
6081    
6082    /**
6083     * Returns the current read entry. This method simply returns the result of the call to
6084     * pam_tree->GetReadEntry(), so it is entirely handled by ROOT.
6085     */
6086    Long64_t PamLevel2::GetReadEntry() {
6087      return pam_tree->GetReadEntry();
6088    }
6089    
6090    /**
6091     * Sets the sorting method. If the new method is different from the previous, the issorted
6092     * flag is set to false, forcing a new sort the next time GetTrack is called.
6093     * @see GetTrack
6094     */
6095    void PamLevel2::SetSortingMethod(TString how) {
6096      if (howtosort != how) {
6097        issorted = false;
6098        issorted_new = false;
6099      }
6100      howtosort = how;
6101    }

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