/[PAMELA software]/PamelaLevel2/src/PamLevel2.cpp
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Diff of /PamelaLevel2/src/PamLevel2.cpp

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revision 1.6 by pam-fi, Tue Oct 24 10:24:27 2006 UTC revision 1.29 by mocchiut, Sat Mar 17 08:41:09 2007 UTC
# Line 7  Line 7 
7   * Default constructor   * Default constructor
8   */   */
9  PamTrack::PamTrack(){  PamTrack::PamTrack(){
10      trk_track  = this->TrkTrack::GetTrkTrack();      trk_track  = 0;
11      calo_track = this->CaloTrkVar::GetCaloTrkVar();      calo_track = 0;
12      tof_track  = this->ToFTrkVar::GetToFTrkVar();      tof_track  = 0;
13        candeleteobj = 0;
14  };  };
15  //--------------------------------------  //--------------------------------------
16  //  //
# Line 19  PamTrack::PamTrack(){ Line 20  PamTrack::PamTrack(){
20   * Constructor   * Constructor
21   */   */
22  PamTrack::PamTrack(TrkTrack* t, CaloTrkVar* c, ToFTrkVar* o){  PamTrack::PamTrack(TrkTrack* t, CaloTrkVar* c, ToFTrkVar* o){
23      trk_track  = this->TrkTrack::GetTrkTrack();  
24      calo_track = this->CaloTrkVar::GetCaloTrkVar();      trk_track  = 0;
25      tof_track  = this->ToFTrkVar::GetToFTrkVar();      calo_track = 0;
26      if(t) *trk_track  = *t;      tof_track  = 0;
27      if(c) *calo_track = *c;  //     if(t)trk_track  = new TrkTrack(*t);
28      if(o) *tof_track  = *o;      //     if(c)calo_track = new CaloTrkVar(*c);
29    //     if(o)tof_track  = new ToFTrkVar(*o);
30        if(t)trk_track  = t;
31        if(c)calo_track = c;
32        if(o)tof_track  = o;
33        candeleteobj = 0;
34    
35  };  };
36    PamTrack::PamTrack(const PamTrack& track){
37    
38        TrkTrack   *t = track.trk_track;
39        CaloTrkVar *c = track.calo_track;
40        ToFTrkVar  *o = track.tof_track;
41    
42        trk_track  = 0;
43        calo_track = 0;
44        tof_track  = 0;
45        if(t)trk_track  = new TrkTrack(*t);
46        if(c)calo_track = new CaloTrkVar(*c);
47        if(o)tof_track  = new ToFTrkVar(*o);
48        candeleteobj = 1;
49        
50    }
51    void PamTrack::Clear(){
52    
53    //    cout << "PamTrack::Clear() "<<candeleteobj<<endl;
54        if(candeleteobj){
55            if(trk_track)  trk_track->TrkTrack::Clear();
56            if(calo_track) calo_track->CaloTrkVar::Clear();//???
57            if(tof_track)  tof_track->ToFTrkVar::Clear();//???
58        }else{
59            trk_track  = 0;
60            calo_track = 0;
61            tof_track  = 0;
62        }
63    }
64    void PamTrack::Delete(){
65    //    cout << "PamTrack::Delete() "<<candeleteobj<<endl;
66        if(candeleteobj){
67            if(trk_track)  {
68                trk_track->TrkTrack::Clear();
69                delete trk_track;
70            }
71            if(calo_track){
72                calo_track->CaloTrkVar::Clear();//???
73                delete calo_track;
74            }
75            if(tof_track){
76                tof_track->ToFTrkVar::Clear();//???
77                delete tof_track;
78            }
79        }else{
80            Clear();
81        }
82    }
83  //--------------------------------------  //--------------------------------------
84  //  //
85  //  //
# Line 36  PamTrack::PamTrack(TrkTrack* t, CaloTrkV Line 89  PamTrack::PamTrack(TrkTrack* t, CaloTrkV
89   */   */
90  PamLevel2::PamLevel2(){  PamLevel2::PamLevel2(){
91                    
92      trk_l1_obj  = this->TrkLevel1::GetTrkLevel1();        //     trk2_obj  = TrkLevel2::GetTrkLevel2();
93      trk_obj     = this->TrkLevel2::GetTrkLevel2();  //     trk1_obj  = TrkLevel1::GetTrkLevel1();
94      calo_obj    = this->CaloLevel2::GetCaloLevel2();  //     trkh_obj  = TrkHough::GetTrkHough();
95      tof_obj     = this->ToFLevel2::GetToFLevel2();  //     calo1_obj = CaloLevel1::GetCaloLevel1();
96      trig_obj    = this->TrigLevel2::GetTrigLevel2();  //     calo2_obj = CaloLevel2::GetCaloLevel2();
97      s4_obj      = this->S4Level2::GetS4Level2();  //     tof_obj   = ToFLevel2::GetToFLevel2();
98      nd_obj      = this->NDLevel2::GetNDLevel2();  //     trig_obj  = TrigLevel2::GetTrigLevel2();
99      ac_obj      = this->AcLevel2::GetAcLevel2();  //     s4_obj    = S4Level2::GetS4Level2();
100      orb_obj     = this->OrbitalInfo::GetOrbitalInfo();  //     nd_obj    = NDLevel2::GetNDLevel2();
101    //     ac_obj    = AcLevel2::GetAcLevel2();
102      run_obj     = new GL_RUN();  //     orb_obj   = OrbitalInfo::GetOrbitalInfo();
103            
104      sorted_tracks = new TRefArray();      h0_obj    = 0;
105            trk0_obj  = 0;
106      CAL = true;  
107      TRK = true;      trk2_obj  = 0;
108      TRG = true;      trk1_obj  = 0;
109      TOF = true;      trkh_obj  = 0;
110      S4  = true;      calo1_obj = 0;
111      ND  = true;      calo2_obj = 0;
112      AC  = true;      tof_obj   = 0;
113      ORB = true;      trig_obj  = 0;
114        s4_obj    = 0;
115        nd_obj    = 0;
116        ac_obj    = 0;
117        orb_obj   = 0;
118    
119        run_obj   = 0;//new GL_RUN();
120        soft_obj   = 0;// Emiliano
121        irun = -1;
122        runfirstentry = 0ULL;
123        runlastentry = 0ULL;
124    
125        l0_file = NULL;
126        l0_tree = NULL;
127        iroot   = -1;
128        dbc     = 0;
129        
130        irun = -1;
131        run_tree = NULL;
132        run_tree_clone = NULL;
133        sel_tree = NULL;
134        sel_tree_clone = NULL;
135        
136        irunentry = -1;
137        pam_tree = NULL;
138        for(Int_t i=0; i<NCLONES; i++ )pam_tree_clone[i]=NULL;
139    
140        host = "mysql://localhost/pamelaprod";
141        user = "anonymous";
142        psw = "";
143        const char *pamdbhost=gSystem->Getenv("PAM_DBHOST");
144        const char *pamdbuser=gSystem->Getenv("PAM_DBUSER");
145        const char *pamdbpsw=gSystem->Getenv("PAM_DBPSW");
146        if ( !pamdbhost ) pamdbhost = "";
147        if ( !pamdbuser ) pamdbuser = "";
148        if ( !pamdbpsw ) pamdbpsw = "";
149        if ( strcmp(pamdbhost,"") ) host = pamdbhost;
150        if ( strcmp(pamdbuser,"") ) user = pamdbuser;
151        if ( strcmp(pamdbpsw,"") ) psw = pamdbpsw;
152    
153        
154    
155    //    sorted_tracks = 0;//new TRefArray();
156        
157        CAL0 = false;
158        CAL1 = true;
159        CAL2 = true;
160        TRK2 = true;
161        TRK1 = false;
162        TRKh = false;
163        TRKh = false;
164        TRG  = true;
165        TOF  = true;
166        TOF0 = false;
167        S4   = true;
168        ND   = true;
169        AC   = true;
170        ORB  = true;
171            
172      TRK_L1 = false;      RUN  = true;
173        
174      Tout  = NULL;      SELLI = -1;
175    
176        tsorted=0;
177        timage=0;
178    
179  };  };
180  /**  /**
181   * Destructor   * Delete the event (act as Dtor)
182   */   */
183  PamLevel2::~PamLevel2(){  void PamLevel2::Delete(){
184                            
185      TrkLevel1::Clear();      if(run_obj)delete run_obj;
186            if(soft_obj)delete soft_obj; //Emiliano
187      TrkLevel2::Clear();  
188      CaloLevel2::Clear();  //    cout << "void PamLevel2::Clear()"<<endl;
189      ToFLevel2::Clear();      if(h0_obj)   delete h0_obj;
190      TrigLevel2::Clear();      if(trk0_obj) delete trk0_obj;      
191      S4Level2::Clear();      if(trk1_obj) delete trk1_obj;      
192      NDLevel2::Clear();      if(trk2_obj) delete trk2_obj;
193      AcLevel2::Clear();      if(trkh_obj) delete trkh_obj;
194      OrbitalInfo::Clear();      if(calo1_obj)delete calo1_obj;
195        if(calo2_obj)delete calo2_obj;
196        if(tof_obj)  delete tof_obj;
197        if(trig_obj) delete trig_obj;
198        if(s4_obj)   delete s4_obj;
199        if(nd_obj)   delete nd_obj;
200        if(ac_obj)   delete ac_obj;
201        if(orb_obj)  delete orb_obj;
202        
203        if(tsorted){
204            tsorted->Delete();
205            delete tsorted;
206        }
207        if(timage){
208            timage->Delete();
209            delete timage;
210        }
211    
212        if(dbc){
213            dbc->Close();
214            delete dbc;
215        }
216            
217      delete run_obj;      if(l0_file)l0_file->Close();
218        if(pam_tree)pam_tree->Delete();;
219        if(run_tree)run_tree->Delete();;
220        if(sel_tree)sel_tree->Delete();;
221        for(Int_t i=0; i<NCLONES; i++ )if(pam_tree_clone[i])pam_tree_clone[i]->Delete();;
222        if(run_tree_clone)run_tree_clone->Delete();;
223        if(sel_tree_clone)sel_tree_clone->Delete();;
224            
225  //      delete sorted_tracks;  
     sorted_tracks->Delete(); // clean the reference array  
           
     if(Tout)Tout->Delete(); // delete loaded tree from memory  
           
226  };  };
227    
228  /**  /**
229   * Clear the event   * Clear the event (NB! does not deallocate objects)
230   */   */
231  void PamLevel2::Clear(){  void PamLevel2::Clear(){
232                    
233      TrkLevel1::Clear();  //    cout << "void PamLevel2::Clear()"<<endl;
234            
235      TrkLevel2::Clear();  //
236      CaloLevel2::Clear();  // This method is called once for every entry but RunInfo and SoftInfo do not change until the next run so we cannot clear them here unless we don't
237      ToFLevel2::Clear();  // want to load them for each event even if they are the same...
238      TrigLevel2::Clear();  //
239      S4Level2::Clear();  //    if(run_obj)delete run_obj;
240      NDLevel2::Clear();  //    if(run_obj) run_obj->Clear();  // Emiliano: Do not deallocate run_obj here, it will give segmentation fault! call clear instead
241      AcLevel2::Clear();  //    if(soft_obj) soft_obj->Clear();
242      OrbitalInfo::Clear();  
243        if(h0_obj)   h0_obj->Clear();      
244        if(trk0_obj) trk0_obj->Clear();    
245        if(trk1_obj) trk1_obj->Clear();    
246        if(trk2_obj) trk2_obj->Clear();
247        if(trkh_obj) trkh_obj->Clear();
248        if(calo1_obj)calo1_obj->Clear();
249        if(calo2_obj)calo2_obj->Clear();
250        if(tof_obj)  tof_obj->Clear();
251        if(trig_obj) trig_obj->Clear();
252        if(s4_obj)   s4_obj->Clear();
253        if(nd_obj)   nd_obj->Clear();
254        if(ac_obj)   ac_obj->Clear();
255        if(orb_obj)  orb_obj->Clear();
256            
257      sorted_tracks->Delete(); // clean the reference array  //    if(sorted_tracks)sorted_tracks->Clear();
258    //    sorted_tracks.Clear();
259    
260        if(tsorted){
261            tsorted->Delete();
262        }
263        if(timage){
264            timage->Delete();
265        }
266            
267  };  };
268    
# Line 112  void PamLevel2::Clear(){ Line 271  void PamLevel2::Clear(){
271  //  //
272  //  //
273  //--------------------------------------  //--------------------------------------
274    void *PamLevel2::GetPointerTo(const char* c ){
275    
276        TString objname = c;
277    
278        if(!objname.CompareTo("TrkLevel1"))  {
279            if(!trk1_obj){
280                trk1_obj  = new TrkLevel1();
281                trk1_obj->Set();
282            }
283            return &trk1_obj;
284        };
285        if(!objname.CompareTo("TrkLevel2"))  {
286            if(!trk2_obj){  
287                trk2_obj  = new TrkLevel2();
288                trk2_obj->Set();
289            }
290            return &trk2_obj;
291        };
292        if(!objname.CompareTo("TrkHough"))   {
293            if(!trkh_obj)  trkh_obj  = new TrkHough();
294            return &trkh_obj;
295        };
296        if(!objname.CompareTo("CaloLevel1")) {
297            if(!calo1_obj) calo1_obj = new CaloLevel1();
298            return &calo1_obj;
299        };
300        if(!objname.CompareTo("CaloLevel2")) {
301            if(!calo2_obj){
302                calo2_obj = new CaloLevel2();
303                calo2_obj->Set();
304            };
305            return &calo2_obj;
306        };
307        if(!objname.CompareTo("ToFLevel2"))  {
308            if(!tof_obj){
309                tof_obj   = new ToFLevel2();
310                tof_obj->Set();
311            }
312            return &tof_obj;
313        };
314        if(!objname.CompareTo("TrigLevel2")) {
315            if(!trig_obj)  trig_obj  = new TrigLevel2();
316            return &trig_obj;
317        };
318        if(!objname.CompareTo("S4Level2"))   {
319            if(!s4_obj)    s4_obj    = new S4Level2();
320            return &s4_obj;
321        };
322        if(!objname.CompareTo("NDLevel2"))   {
323            if(!nd_obj)    nd_obj    = new NDLevel2();
324            return &nd_obj;
325        };
326        if(!objname.CompareTo("AcLevel2"))   {
327            if(!ac_obj)    ac_obj    = new AcLevel2();
328            return &ac_obj;
329        };
330        if(!objname.CompareTo("OrbitalInfo")){
331            if(!orb_obj)   orb_obj   = new OrbitalInfo();
332            return &orb_obj;
333        };
334        
335        if(!objname.CompareTo("RunInfo"))return &run_obj;
336    
337        if(!objname.CompareTo("SoftInfo"))return &soft_obj; // Emiliano
338    
339        return NULL;
340    };
341    //--------------------------------------
342    //
343    //
344    //--------------------------------------
345  /**  /**
346   * Retrieves the calorimeter track matching the seqno-th tracker stored track.   * Retrieves the calorimeter track matching the seqno-th tracker stored track.
347   * (If seqno = -1 retrieves the self-trigger calorimeter track)   * (If seqno = -1 retrieves the self-trigger calorimeter track)
348   */   */
349   CaloTrkVar *PamLevel2::GetCaloStoredTrack(int seqno){   CaloTrkVar *PamLevel2::GetCaloStoredTrack(int seqno){
350                
351       if( CaloLevel2::ntrk()==0 ){       if( !calo2_obj )return 0;
352    
353         if( calo2_obj->CaloLevel2::ntrk()==0 ){
354           cout << "PamLevel2::GetCaloStoredTrack(int) : requested tracker SeqNo "<< seqno <<" but no Calorimeter tracks are stored"<<endl;           cout << "PamLevel2::GetCaloStoredTrack(int) : requested tracker SeqNo "<< seqno <<" but no Calorimeter tracks are stored"<<endl;
355           return NULL;           return NULL;
356       };       };
# Line 127  void PamLevel2::Clear(){ Line 359  void PamLevel2::Clear(){
359       Int_t it_calo=0;       Int_t it_calo=0;
360            
361       do{       do{
362           c = CaloLevel2::GetCaloTrkVar(it_calo);           c = calo2_obj->CaloLevel2::GetCaloTrkVar(it_calo);
363           it_calo++;           it_calo++;
364       } while( c && seqno != c->trkseqno && it_calo < CaloLevel2::ntrk());             } while( c && seqno != c->trkseqno && it_calo < calo2_obj->CaloLevel2::ntrk());    
365            
366       if(!c || seqno != c->trkseqno){       if(!c || seqno != c->trkseqno){
367           c = 0;           c = 0;
# Line 148  void PamLevel2::Clear(){ Line 380  void PamLevel2::Clear(){
380   */   */
381   ToFTrkVar *PamLevel2::GetToFStoredTrack(int seqno){   ToFTrkVar *PamLevel2::GetToFStoredTrack(int seqno){
382                    
383       if( ToFLevel2::ntrk()==0 ){       if( !tof_obj )return 0;
384    
385         if( tof_obj->ToFLevel2::ntrk()==0 ){
386           cout << "PamLevel2::GetToFStoredTrack(int) : requested tracker SeqNo "<< seqno <<" but no ToF tracks are stored"<<endl;           cout << "PamLevel2::GetToFStoredTrack(int) : requested tracker SeqNo "<< seqno <<" but no ToF tracks are stored"<<endl;
387           return NULL;           return NULL;
388       };       };
# Line 157  void PamLevel2::Clear(){ Line 391  void PamLevel2::Clear(){
391       Int_t it_tof=0;       Int_t it_tof=0;
392            
393       do{       do{
394           c = ToFLevel2::GetToFTrkVar(it_tof);           c = tof_obj->ToFLevel2::GetToFTrkVar(it_tof);
395           it_tof++;           it_tof++;
396       } while( c && seqno != c->trkseqno && it_tof < ToFLevel2::ntrk());       } while( c && seqno != c->trkseqno && it_tof < tof_obj->ToFLevel2::ntrk());        
397            
398       if(!c || seqno != c->trkseqno){       if(!c || seqno != c->trkseqno){
399           c = 0;           c = 0;
# Line 177  void PamLevel2::Clear(){ Line 411  void PamLevel2::Clear(){
411   * Give the pamela track associated to a tracker track, retrieving related calorimeter and tof track information.   * Give the pamela track associated to a tracker track, retrieving related calorimeter and tof track information.
412   */   */
413   PamTrack* PamLevel2::GetPamTrackAlong(TrkTrack* t){   PamTrack* PamLevel2::GetPamTrackAlong(TrkTrack* t){
414                
415         cout <<"PamLevel2::GetPamTrackAlong(TrkTrack* t) **obsolete** "<<endl;
416         cout <<"(if you use it, remember to delete the PamTrack object)"<<endl;
417    
418       CaloTrkVar *c = 0;       CaloTrkVar *c = 0;
419       ToFTrkVar  *o = 0;       ToFTrkVar  *o = 0;
420            
421       if(CAL) c = GetCaloStoredTrack(t->GetSeqNo());       if(CAL2) c = GetCaloStoredTrack(t->GetSeqNo());
422       if(TOF) o = GetToFStoredTrack(t->GetSeqNo());       if(TOF) o = GetToFStoredTrack(t->GetSeqNo());
423            
424  //    if(t && c && o)track = new PamTrack(t,c,o);  //    if(t && c && o)track = new PamTrack(t,c,o);
# Line 202  void PamLevel2::Clear(){ Line 439  void PamLevel2::Clear(){
439    
440  PamTrack* PamLevel2::GetStoredTrack(Int_t itrk){  PamTrack* PamLevel2::GetStoredTrack(Int_t itrk){
441            
442        cout <<"PamLevel2::GetStoredTrack(Int_t itrk) **to-be-updated** "<<endl;
443        cout <<"for the moment, better use separately the methods: TrkLevel2::GetStoredTrack(seqno) CaloLevel2::GetCaloTrkVar(Int_t notrack) ToFLevel2::GetToFTrkVar(Int_t notrack)"<<endl;
444        cout <<"(if you use it, remember to delete the PamTrack object)"<<endl;
445      PamTrack *track = 0;      PamTrack *track = 0;
446            
447      if( itrk >=0 && itrk < TrkLevel2::ntrk() ){      if( itrk >=0 && itrk < trk2_obj->TrkLevel2::ntrk() ){
448                    
449          TrkTrack *t = TrkLevel2::GetStoredTrack(itrk);          TrkTrack *t = trk2_obj->TrkLevel2::GetStoredTrack(itrk);
450          track = GetPamTrackAlong(t);          track = GetPamTrackAlong(t);
451                    
452            
453    
454      }else{      }else{
455          cout << "PamLevel2::GetStoredTrack(int) : tracker track SeqNo "<< itrk <<" does not exist (GetNTracks() = "<<TrkLevel2::GetNTracks()<<")"<<endl;          cout << "PamLevel2::GetStoredTrack(int) : tracker track SeqNo "<< itrk <<" does not exist (GetNTracks() = "<<trk2_obj->TrkLevel2::GetNTracks()<<")"<<endl;
456      };      };
457            
458      return track;      return track;
# Line 224  PamTrack* PamLevel2::GetStoredTrack(Int_ Line 466  PamTrack* PamLevel2::GetStoredTrack(Int_
466   * Sort physical (tracker) tracks and stores them in the TRefArray (of TrkTrack objects) which pointer is  PamLevel2::sorted_tracks.   * Sort physical (tracker) tracks and stores them in the TRefArray (of TrkTrack objects) which pointer is  PamLevel2::sorted_tracks.
467   * @param how String to set the sorting cryterium (es: "CAL" or "TRK+CAL+TOF" ecc...).   * @param how String to set the sorting cryterium (es: "CAL" or "TRK+CAL+TOF" ecc...).
468   * Sorting cryteria:   * Sorting cryteria:
469   * TRK: lower chi**2   * TRK: lower chi**2
470   * CAL: lower Y spatial residual on the first calorimeter plane   * CAL: lower Y spatial residual on the first calorimeter plane
471   * TOF: bigger numebr of hit PMTs along the track, on S12 S21 S32 (where paddles are along the Y axis).   * TOF: bigger numebr of hit PMTs along the track, on S12 S21 S32 (where paddles are along the Y axis).
472   * The default sorting cryterium is "TOF+CAL".   * The default sorting cryterium is "TOF+CAL".
# Line 233  PamTrack* PamLevel2::GetStoredTrack(Int_ Line 475  PamTrack* PamLevel2::GetStoredTrack(Int_
475   */   */
476  void PamLevel2::SortTracks(TString how){  void PamLevel2::SortTracks(TString how){
477    
478    //    cout <<" PamLevel2::SortTracks(TString how) "<<endl;
479        if( !trk2_obj ){
480            cout << "void PamLevel2::SortTracks(TString how):  TrkLevel2 not loaded !!!";
481            return;
482        };
483    //    cout << "call SortTracs() "<<endl;
484    //Save current Object count    //Save current Object count
485      Int_t ObjectNumber = TProcessID::GetObjectCount();      Int_t ObjectNumber = TProcessID::GetObjectCount();
486        
487      sorted_tracks->Delete(); //temporaneo???  //    cout << "ObjectNumber  "<<ObjectNumber <<endl;
488            
489    //     if(!sorted_tracks)sorted_tracks = new TRefArray();
490    //     sorted_tracks->Clear();
491    //    sorted_tracks.Clear();
492    
493        if(!tsorted)tsorted = new TClonesArray("PamTrack",trk2_obj->GetNTracks());
494        tsorted->Delete();
495        TClonesArray &ttsorted = *tsorted;
496        if(!timage)timage = new TClonesArray("PamTrack",trk2_obj->GetNTracks());
497        timage->Delete();
498        TClonesArray &ttimage = *timage;
499    
500    
501      // loop over the tracks sorted by the tracker      // loop over the tracks sorted by the tracker
502      Bool_t use_TRK = how.Contains("TRK", TString::kIgnoreCase);      Bool_t use_TRK = how.Contains("TRK", TString::kIgnoreCase);
503      Bool_t use_CAL = how.Contains("CAL", TString::kIgnoreCase);      Bool_t use_CAL = how.Contains("CAL", TString::kIgnoreCase);
504      Bool_t use_TOF = how.Contains("TOF", TString::kIgnoreCase);      Bool_t use_TOF = how.Contains("TOF", TString::kIgnoreCase);
505            
506      if( !CAL &&  use_CAL) use_CAL = false;      if( !CAL2 &&  use_CAL) use_CAL = false;
507      if( !TOF &&  use_TOF) use_TOF = false;      if( !TOF &&  use_TOF) use_TOF = false;
508            
509      if( !TRK ){      if( !TRK2 ){
510          cout << "SortTracks() : without tracker does not work!!! (not yet)" << endl;  //      cout << "SortTracks() : without tracker does not work!!! (not yet)" << endl;
511          return;          return;
512      };      };
513    
514        //   cout << "use_CAL "<<use_CAL<<" use_TOF "<<use_TOF<<" use_TRK "<<use_TRK <<endl;
515            
516      for(Int_t i=0; i < TrkLevel2::GetNTracks(); i++){      for(Int_t i=0; i < trk2_obj->TrkLevel2::GetNTracks(); i++){
517                    
518          TrkTrack *ts = 0;          TrkTrack   *ts = 0;
519            CaloTrkVar *cs = 0;
520            ToFTrkVar  *os = 0;
521                    
522          // get tracker tracks          // get tracker tracks
523          TrkTrack   *tp = TrkLevel2::GetTrack(i);                    //tracker          TrkTrack   *tp = trk2_obj->TrkLevel2::GetTrack(i);                    //tracker
524  //              CaloTrkVar *cp = GetCaloStoredTrack(tp->GetSeqNo());          CaloTrkVar *cp = GetCaloStoredTrack(tp->GetSeqNo());
525  //              ToFTrkVar  *op = GetToFStoredTrack(tp->GetSeqNo());          ToFTrkVar  *op = GetToFStoredTrack(tp->GetSeqNo());
526          CaloTrkVar *cp = 0;  
527          ToFTrkVar  *op = 0;          TrkTrack   *ti = 0;              //tracker (image)
528                    CaloTrkVar *ci = 0;
529            ToFTrkVar  *oi = 0;
530    //      cout << "trk track n. "<<i << " "<<hex<< tp <<dec<< endl;
531          // if track has an image, check image selection          // if track has an image, check image selection
532          if(tp->HasImage()){          if(tp->HasImage()){
533                            
534              TrkTrack   *ti = TrkLevel2::GetTrackImage(i);              //tracker (image)              ti = trk2_obj->TrkLevel2::GetTrackImage(i);              //tracker (image)
535  //                      CaloTrkVar *ci = GetCaloStoredTrack(ti->GetSeqNo());              ci = GetCaloStoredTrack(ti->GetSeqNo());
536  //                      ToFTrkVar  *oi = GetToFStoredTrack(ti->GetSeqNo());              oi = GetToFStoredTrack(ti->GetSeqNo());
             CaloTrkVar *ci = 0;  
             ToFTrkVar  *oi = 0;  
537                            
538    //          cout << "its image "<<i << " "<<hex<< ti <<dec<< endl;
539    
540              //assign starting scores              //assign starting scores
541              Int_t tp_score = 0;  //main track sorted by the tracker              Int_t tp_score = 0;  //main track sorted by the tracker
542              Int_t ti_score = 0;  //image track              Int_t ti_score = 0;  //image track
# Line 280  void PamLevel2::SortTracks(TString how){ Line 546  void PamLevel2::SortTracks(TString how){
546              // ------------------------              // ------------------------
547              // check the Y spatial residual on the first calorimeter plane              // check the Y spatial residual on the first calorimeter plane
548              // (cut on calorimeter variables from Emiliano)              // (cut on calorimeter variables from Emiliano)
549                if( use_CAL && !calo2_obj ){
550                    cout << "void PamLevel2::SortTracks(TString how): how= "<<how<<" but CaloLevel2 not loaded !!!";
551                    return;
552                };
553              if(              if(
554                  use_CAL            &&                  use_CAL            &&
555                  npcfit[1] > 15     &&   //no. of fit planes on Y view                  calo2_obj->npcfit[1] > 15     &&   //no. of fit planes on Y view
556                  varcfit[1] < 1000. &&  //fit variance on Y view                  calo2_obj->varcfit[1] < 1000. &&  //fit variance on Y view
557                    cp && ci &&
558                  true){                  true){
559    
560                                    
561                  cp = GetCaloStoredTrack(tp->GetSeqNo());                  Float_t resy_p = cp->tbar[0][1] - calo2_obj->cbar[0][1]; if(resy_p < 0)resy_p= - resy_p;
562                  ci = GetCaloStoredTrack(ti->GetSeqNo());                  Float_t resy_i = ci->tbar[0][1] - calo2_obj->cbar[0][1]; if(resy_i < 0)resy_i= - resy_i;
                   
                 Float_t resy_p = cp->tbar[0][1] - cbar[0][1]; if(resy_p < 0)resy_p= - resy_p;  
                 Float_t resy_i = ci->tbar[0][1] - cbar[0][1]; if(resy_i < 0)resy_i= - resy_i;  
563                                    
564                  if(resy_p <= resy_i) tp_score++;                  if(resy_p <= resy_i) tp_score++;
565                  else                 ti_score++;                  else                 ti_score++;
566    
567    //              cout << "CALO "<<tp_score<<ti_score<<endl;
568    
569              };              };
570              // ------------------------              // ------------------------
571              // TOF check              // TOF check
572              // ------------------------                  // ------------------------    
573              // check the number of hit pmts along the track              // check the number of hit pmts along the track
574              // on S12 S21 and S32, where paddles are parallel to Y axis              // on S12 S21 and S32, where paddles are parallel to Y axis
575              if( use_TOF ){              if( use_TOF && !tof_obj ){
576                    cout << "void PamLevel2::SortTracks(TString how): how= "<<how<<" but ToFLevel2 not loaded !!!";
577                    return;
578                };
579                if( use_TOF && op && oi ){
580                                    
581                  Int_t nphit_p =0;                  Int_t nphit_p =0;
582                  Int_t nphit_i =0;                  Int_t nphit_i =0;
583                                    
                 op = GetToFStoredTrack(tp->GetSeqNo());  
                 oi = GetToFStoredTrack(ti->GetSeqNo());  
584                                    
585  /*                              cout << "track: npmtadc "<< op->npmtadc << endl;  /*                              cout << "track: npmtadc "<< op->npmtadc << endl;
586                                  cout << "track: npmttdc "<< op->npmttdc << endl;                                  cout << "track: npmttdc "<< op->npmttdc << endl;
# Line 314  void PamLevel2::SortTracks(TString how){ Line 588  void PamLevel2::SortTracks(TString how){
588                                  cout << "image: npmttdc "<< oi->npmttdc << endl;*/                                  cout << "image: npmttdc "<< oi->npmttdc << endl;*/
589                                    
590                  for (Int_t ih=0; ih < op->npmtadc; ih++){                  for (Int_t ih=0; ih < op->npmtadc; ih++){
591                      Int_t pl = GetPlaneIndex( (op->pmtadc).At(ih) );                      Int_t pl = tof_obj->GetPlaneIndex( (op->pmtadc).At(ih) );
592                      if(pl == 1 || pl == 2 || pl == 5)nphit_p++;                      if(pl == 1 || pl == 2 || pl == 5)nphit_p++;
593                  };                  };
594                                    
595                  for (Int_t ih=0; ih < oi->npmtadc; ih++){                  for (Int_t ih=0; ih < oi->npmtadc; ih++){
596                      Int_t pl = GetPlaneIndex( (oi->pmtadc).At(ih) );                      Int_t pl = tof_obj->GetPlaneIndex( (oi->pmtadc).At(ih) );
597                      if(pl == 1 || pl == 2 || pl == 5)nphit_i++;                      if(pl == 1 || pl == 2 || pl == 5)nphit_i++;
598                  };                  };
599                                    
# Line 331  void PamLevel2::SortTracks(TString how){ Line 605  void PamLevel2::SortTracks(TString how){
605                      if( nphit_p >= nphit_i) tp_score++;                      if( nphit_p >= nphit_i) tp_score++;
606                      else ti_score++;                      else ti_score++;
607                  };                  };
608    //              cout << "TOF "<<tp_score<<ti_score<<endl;
609              };              };
610              if(tp_score == ti_score) use_TRK = true;              if(tp_score == ti_score) use_TRK = true;
611              // ------------------------              // ------------------------
# Line 342  void PamLevel2::SortTracks(TString how){ Line 617  void PamLevel2::SortTracks(TString how){
617              if(use_TRK){              if(use_TRK){
618                  if(      tp->chi2 > 0 && tp->chi2 < ti->chi2 ) tp_score++ ;                  if(      tp->chi2 > 0 && tp->chi2 < ti->chi2 ) tp_score++ ;
619                  else if( ti->chi2 > 0 && ti->chi2 < tp->chi2 ) ti_score++ ;                  else if( ti->chi2 > 0 && ti->chi2 < tp->chi2 ) ti_score++ ;
620    //              cout << "TRK "<<tp_score<<ti_score<<endl;
621              };              };
622                            
623              // ------------------------              // ------------------------
624              // the winner is....              // the winner is....
625              // ------------------------                  // ------------------------    
626              if      (tp_score > ti_score) ts = tp;//the track sorted by the tracker!!              if      (tp_score > ti_score) {
627              else if (tp_score < ti_score) ts = ti;//its image!!  //              ts = tp;//the track sorted by the tracker!!
628              else {  //              cs = cp;
629                  ts = tp;  //              os = op;
630                }else if (tp_score < ti_score) {
631                    ts = ti;//its image!!
632                    cs = ci;
633                    os = oi;
634    
635                    ti = tp;//its image!!
636                    ci = cp;
637                    oi = op;
638    
639                    tp = ts;//its image!!
640                    cp = cs;
641                    op = os;
642    
643                    
644                }else {
645    //              ts = tp;
646    //              cs = cp;
647    //              os = op;
648  //                              cout << "Warning - track image ambiguity not solved" << endl;  //                              cout << "Warning - track image ambiguity not solved" << endl;
649  //                              cout << ts->GetNtot() << " "<< ts->chi2 << " " << npcfit[1] << " "<< nphit_p << endl;  //                              cout << ts->GetNtot() << " "<< ts->chi2 << " " << npcfit[1] << " "<< nphit_p << endl;
650              };              };
651                            
652          }else{          }else{
653              ts = tp;  //          ts = tp;
654    //          cs = cp;
655    //          os = op;
656          };          };
657                    
658  //              cout <<" SortTracks() "<<i<<" -- "<<ts<<endl;  //      cout <<" SortTracks() "<<i<<" -- "<<ts<<endl;
659          sorted_tracks->Add(ts);//save the track in the sorted array  //      sorted_tracks->Add(ts);//save the track in the sorted array
660  //              cout << "SortTracks:: sorted_tracks->Add(it) "<<i<<" "<<ts<<endl;  //      sorted_tracks.Add(ts);//save the track in the sorted array
661            //      sorted_tracks.Add(tp);//save the track in the sorted array
662      };  //      cout << "SortTracks:: sorted_tracks->Add(it) "<<i<<" "<<ts<<endl;
663    //      cout<<"o "<<tp<<endl;
664    //      cout<<"o "<<cp<<endl;
665    //      cout<<"o "<<op<<endl;
666            new(ttsorted[i]) PamTrack(tp,cp,op);
667            new(ttimage[i])  PamTrack(ti,ci,oi);
668        };
669    
670        if( tsorted->GetEntries() != trk2_obj->GetNTracks() ){
671            cout << "void PamLevel2::SortTracks(TString how): tsorted->GetEntries() "<<tsorted->GetEntries()<<" != trk2_obj->GetNTracks() = "<<trk2_obj->GetNTracks() <<endl;
672            tsorted->Delete(); tsorted=0;
673            timage->Delete(); timage=0;    
674        }
675    
676      //Restore Object count      //Restore Object count
677      //To save space in the table keeping track of all referenced objects      //To save space in the table keeping track of all referenced objects
678      //we assume that our events do not address each other. We reset the      //We reset the object count to what it was at the beginning of the event.
     //object count to what it was at the beginning of the event.  
679      TProcessID::SetObjectCount(ObjectNumber);      TProcessID::SetObjectCount(ObjectNumber);
680            
681  };  };
# Line 379  void PamLevel2::SortTracks(TString how){ Line 687  void PamLevel2::SortTracks(TString how){
687   * This method overrides TrkLevel2::GetTracks(), where sorting is done by decreasing number of fit points and increasing chi^2.   * This method overrides TrkLevel2::GetTracks(), where sorting is done by decreasing number of fit points and increasing chi^2.
688   * PamLevel2::GetTracks() keeps the same track order given by TrkLevel2::GetTracks(), but checks image selection by using calorimeter and ToF tracking information.   * PamLevel2::GetTracks() keeps the same track order given by TrkLevel2::GetTracks(), but checks image selection by using calorimeter and ToF tracking information.
689   */   */
690   TRefArray *PamLevel2::GetTracks(){  // TRefArray *PamLevel2::GetTracks(){
691           //  
692  //      SortTracks("+CAL+TOF");  // //  *-*-*-*-*-*-*-*-*-*-*-*-*
693           SortTracks("+CAL+TRK");//TEMP!!!!!!!!!!!!!  //     SortTracks("+CAL+TOF");
694          //  // //  *-*-*-*-*-*-*-*-*-*-*-*-*
695          return sorted_tracks;  
696    // //   return  sorted_tracks;
697    //     return &sorted_tracks;
698        
699    //  };
700    TClonesArray *PamLevel2::GetTracks(){
701    
702    //  *-*-*-*-*-*-*-*-*-*-*-*-*
703        SortTracks("+CAL+TOF");
704    //  *-*-*-*-*-*-*-*-*-*-*-*-*
705    
706        return tsorted;
707        
708   };   };
709  //--------------------------------------  //--------------------------------------
710   //   //
# Line 396  void PamLevel2::SortTracks(TString how){ Line 716  void PamLevel2::SortTracks(TString how){
716   * @param it Track number, ranging from 0 to GetNTracks().   * @param it Track number, ranging from 0 to GetNTracks().
717   */   */
718  PamTrack *PamLevel2::GetTrack(int it){  PamTrack *PamLevel2::GetTrack(int it){
719    
720    //    if(!trk2_obj) return 0;
721                    
722  //  *-*-*-*-*-*-*  // //  *-*-*-*-*-*-*-*-*-*-*-*-*
723  //      SortTracks("+CAL+TOF");  //     SortTracks("+CAL+TOF");
724      SortTracks("+CAL+TRK");//TEMP!!!!!!!!!!!!!  // //  *-*-*-*-*-*-*-*-*-*-*-*-*
725  //  *-*-*-*-*-*-*  // //    if(!sorted_tracks)return 0;
726    //     if(sorted_tracks.IsEmpty())return 0;
727    
728    //     PamTrack *track = 0;
729        
730    //     if( it >=0 && it < trk2_obj->TrkLevel2::GetNTracks() && it<sorted_tracks.GetEntriesFast() ){    
731    //      TrkTrack   *t = (TrkTrack*)sorted_tracks.At(it);
732    //      track = GetPamTrackAlong(t);
733    //     }else{
734    //      cout << "PamLevel2::GetTrack(int) : tracker track SeqNo "<< it <<" does not exist (GetNTracks() = "<<trk2_obj->TrkLevel2::GetNTracks()<<")"<<endl;
735    //     };
736        
737    //     return track;
738    
739    //    cout << "PamLevel2::GetTrack(int it) "<<endl;
740    //  *-*-*-*-*-*-*-*-*-*-*-*-*
741        SortTracks("+CAL+TOF");
742    //  *-*-*-*-*-*-*-*-*-*-*-*-*
743        if(!tsorted)return 0;
744        if(!tsorted->GetEntries())return 0;
745    
746      PamTrack *track = 0;      PamTrack *track = 0;
747            
748      if( it >=0 && it < TrkLevel2::GetNTracks() && it<sorted_tracks->GetEntriesFast() ){      if( it >=0 && it < trk2_obj->TrkLevel2::GetNTracks()){
749          TrkTrack   *t = (TrkTrack*)sorted_tracks->At(it);  //      TrkTrack   *t = (TrkTrack*)sorted_tracks.At(it);
750          track = GetPamTrackAlong(t);  //      track = GetPamTrackAlong(t);
751            TClonesArray &t = *(tsorted);
752            track = (PamTrack*)t[it];
753            
754      }else{      }else{
755          cout << "PamLevel2::GetTrack(int) : tracker track SeqNo "<< it <<" does not exist (GetNTracks() = "<<TrkLevel2::GetNTracks()<<")"<<endl;          cout << "PamLevel2::GetTrack(int) : tracker track SeqNo "<< it <<" does not exist (GetNTracks() = "<<trk2_obj->TrkLevel2::GetNTracks()<<")"<<endl;
756      };      };
757            
758      return track;      return track;
# Line 425  PamTrack *PamLevel2::GetTrack(int it){ Line 769  PamTrack *PamLevel2::GetTrack(int it){
769   */   */
770  PamTrack *PamLevel2::GetTrackImage(int it){  PamTrack *PamLevel2::GetTrackImage(int it){
771    
772  //      SortTracks("+CAL+TOF");  //     if(!trk2_obj) return 0;
         SortTracks("+CAL+TRK");//TEMP!!!!!!!!!!!!!  
           
         PamTrack *image = 0;  
773    
774          if( it >=0 && it < TrkLevel2::GetNTracks() ){  // //  *-*-*-*-*-*-*-*-*-*-*-*-*
775                  TrkTrack *temp = (TrkTrack*)sorted_tracks->At(it);  //     SortTracks("+CAL+TOF");
776                  if( temp->HasImage() ){  // //  *-*-*-*-*-*-*-*-*-*-*-*-*
777                          TrkTrack   *t = TrkLevel2::GetStoredTrack(temp->GetImageSeqNo());  // //    if(!sorted_tracks)return 0;
778                          image = GetPamTrackAlong(t);  //     if(sorted_tracks.IsEmpty())return 0;
779                  }else{      
780                          cout <<"PamLevel2::GetTrackImage(int) : Track SeqNo "<<it<<" does not have image"<<endl;  //     PamTrack *image = 0;
781                  };      
782    //     if( it >=0 && it < trk2_obj->TrkLevel2::GetNTracks() ){
783    //      TrkTrack *temp = (TrkTrack*)sorted_tracks.At(it);
784    //      if( temp->HasImage() ){
785    //          TrkTrack   *t = trk2_obj->TrkLevel2::GetStoredTrack(temp->GetImageSeqNo());
786    //          image = GetPamTrackAlong(t);
787    //      }else{
788    //          cout <<"PamLevel2::GetTrackImage(int) : Track SeqNo "<<it<<" does not have image"<<endl;
789    //      };
790    //     }else{
791    //      cout << "PamLevel2::GetTrackImage(int) : Tracker track SeqNo "<< it <<" does not exist (GetNTracks() = "<<trk2_obj->TrkLevel2::GetNTracks()<<")"<<endl;
792    //     };
793        
794    //     return image;
795    
796    
797    //  *-*-*-*-*-*-*-*-*-*-*-*-*
798        SortTracks("+CAL+TOF");
799    //  *-*-*-*-*-*-*-*-*-*-*-*-*
800        if(!timage)return 0;
801        if(!timage->GetEntries())return 0;
802        
803        PamTrack *image = 0;
804        
805        if( it >=0 && it < trk2_obj->TrkLevel2::GetNTracks() ){
806            TClonesArray &t = *(tsorted);
807            PamTrack *temp = (PamTrack*)t[it];
808            if( temp->GetTrkTrack()->HasImage() ){
809                TClonesArray &t = *(timage);
810                image = (PamTrack*)t[it];
811          }else{          }else{
812                  cout << "PamLevel2::GetTrackImage(int) : Tracker track SeqNo "<< it <<" does not exist (GetNTracks() = "<<TrkLevel2::GetNTracks()<<")"<<endl;  //          cout <<"PamLevel2::GetTrackImage(int) : Track SeqNo "<<it<<" does not have image"<<endl;
813          };          };
814        }else{
815            cout << "PamLevel2::GetTrackImage(int) : Tracker track SeqNo "<< it <<" does not exist (GetNTracks() = "<<trk2_obj->TrkLevel2::GetNTracks()<<")"<<endl;
816        };
817            
818          return image;      return image;
819  }  }
820    
821  //--------------------------------------  //--------------------------------------
# Line 455  PamTrack *PamLevel2::GetTrackImage(int i Line 828  PamTrack *PamLevel2::GetTrackImage(int i
828   * @param detlist String to select trees to be included   * @param detlist String to select trees to be included
829   * @return Pointer to a TTree   * @return Pointer to a TTree
830   */   */
831  TTree *PamLevel2::GetPamTree(TFile *f, TString detlist="+ALL"){  TTree *PamLevel2::GetPamTree(TFile *f, TString detlist ){
832    
833  //      cout << "WARNING!!! -- obsolete method -- \n";  //     if( !detlist.IsNull() ) SetWhichTrees(detlist);
834  //      cout << "better use TChain *PamLevel2::GetPamTree(TList*, TString) \n";  //     else                    GetWhichTrees(f);
           
     TTree *Trout =0;  
835            
836        cout << "TTree *PamLevel2::GetPamTree(TFile *f, TString detlist ) -- obsolte "<<endl;
837    
838      SetWhichTrees(detlist);      SetWhichTrees(detlist);
839    
840        TTree *Trout =0;
841    
842        TString fname = f->GetName();
843        if(!CheckLevel2File(fname))return NULL;
844    
845    //    UInt_t *found=0;    
846    
847        cout<< "GetPamTree(TFile*,TString): detector list --> ";
848        if(TRK1)cout<<"TRK1 ";
849        if(TRK2)cout<<"TRK2 ";
850        if(TRKh)cout<<"TRKH ";
851        if(CAL1)cout<<"CAL1 ";
852        if(CAL2)cout<<"CAL2 ";
853        if(TOF)cout<<"TOF ";
854        if(TRG)cout<<"TRG ";
855        if(AC)cout<<"AC ";
856        if(ND)cout<<"ND ";
857        if(S4)cout<<"S4 ";
858        if(ORB)cout<<"ORB ";
859        cout << endl;
860        if(SELLI)cout<<">>> Found selection-list <<<"<<endl;
861    
862        f->cd();
863    
864  // Tracker  // Tracker
865      TTree *T = (TTree*)f->Get("Tracker");      TTree *T = (TTree*)f->Get("Tracker");
866      if(T && TRK) {      if(T && (TRK2||TRK1||TRKh)) {
867          if(TRK_L1){          if(TRK2)T->SetBranchAddress("TrkLevel2", GetPointerTo("TrkLevel2"));
868              T->SetBranchAddress("TrkLevel1", GetPointerToTrk(1));  //      else    T->SetBranchStatus("TrkLevel2",0,found);
869              cout << "Tracker      : set branch address TrkLevel1"<<endl;          if(TRK2)cout << "Tracker      : set branch address TrkLevel2"<<endl;
870          };          if(TRK1)T->SetBranchAddress("TrkLevel1", GetPointerTo("TrkLevel1"));
871          T->SetBranchAddress("TrkLevel2", GetPointerToTrk(2));  //      else    T->SetBranchStatus("TrkLevel1",0,found);
872          cout << "Tracker      : set branch address TrkLevel2"<<endl;          if(TRK1)cout << "Tracker      : set branch address TrkLevel1"<<endl;
873          Trout=T;          if(TRKh)T->SetBranchAddress("TrkHough", GetPointerTo("TrkHough"));
874    //      else    T->SetBranchStatus("TrkHough",0,found);
875            if(TRKh)cout << "Tracker      : set branch address TrkHough"<<endl;
876            if(!Trout)Trout=T;
877            else Trout->AddFriend(T);
878      }else{      }else{
879          cout << "Tracker      : missing tree"<<endl;          cout << "Tracker      : missing tree"<<endl;
880      };      };
881      // Calorimeter      // Calorimeter
882      TTree *C = (TTree*)f->Get("Calorimeter");      TTree *C = (TTree*)f->Get("Calorimeter");
883      if(C && CAL) {      if(C && (CAL2||CAL1)) {
884          C->SetBranchAddress("CaloLevel2", GetPointerToCalo());          if(CAL2)C->SetBranchAddress("CaloLevel2", GetPointerTo("CaloLevel2"));
885          cout << "Calorimeter  : set branch address CaloLevel2"<<endl;  //      else    C->SetBranchStatus("CaloLevel2",0,found);
886            if(CAL2)cout << "Calorimeter  : set branch address CaloLevel2"<<endl;
887            if(CAL1)C->SetBranchAddress("CaloLevel1", GetPointerTo("CaloLevel1"));
888    //      else    C->SetBranchStatus("CaloLevel1",0,found);
889            if(CAL1)cout << "Calorimeter  : set branch address CaloLevel1"<<endl;
890          if(!Trout)Trout=C;          if(!Trout)Trout=C;
891          else Trout->AddFriend(C);          else Trout->AddFriend(C);
892      }else{      }else{
893          cout << "Calorimeter  : missing tree"<<endl;          cout << "Calorimeter  : missing tree"<<endl;
894      };      };
895    
896      // ToF          // ToF    
897      TTree *O = (TTree*)f->Get("ToF");      TTree *O = (TTree*)f->Get("ToF");
898      if(O && TOF) {      if(O && TOF) {
899          O->SetBranchAddress("ToFLevel2", GetPointerToToF());          O->SetBranchAddress("ToFLevel2", GetPointerTo("ToFLevel2"));
900          cout << "ToF          : set branch address ToFLevel2"<<endl;          cout << "ToF          : set branch address ToFLevel2"<<endl;
901          if(!Trout)Trout=O;          if(!Trout)Trout=O;
902          else Trout->AddFriend(O);          else Trout->AddFriend(O);
# Line 499  TTree *PamLevel2::GetPamTree(TFile *f, T Line 906  TTree *PamLevel2::GetPamTree(TFile *f, T
906      // Trigger      // Trigger
907      TTree *R = (TTree*)f->Get("Trigger");      TTree *R = (TTree*)f->Get("Trigger");
908      if(R && TRG) {      if(R && TRG) {
909          R->SetBranchAddress("TrigLevel2", GetPointerToTrig());          R->SetBranchAddress("TrigLevel2", GetPointerTo("TrigLevel2"));
910          cout << "Trigger      : set branch address TrigLevel2"<<endl;          cout << "Trigger      : set branch address TrigLevel2"<<endl;
911          if(!Trout)Trout=O;          if(!Trout)Trout=O;
912          else Trout->AddFriend(R);          else Trout->AddFriend(R);
# Line 509  TTree *PamLevel2::GetPamTree(TFile *f, T Line 916  TTree *PamLevel2::GetPamTree(TFile *f, T
916      // S4      // S4
917      TTree *S = (TTree*)f->Get("S4");      TTree *S = (TTree*)f->Get("S4");
918      if(S && S4) {      if(S && S4) {
919          S->SetBranchAddress("S4Level2", GetPointerToS4());          S->SetBranchAddress("S4Level2", GetPointerTo("S4Level2"));
920          cout << "S4           : set branch address S4Level2"<<endl;          cout << "S4           : set branch address S4Level2"<<endl;
921          if(!Trout)Trout=O;          if(!Trout)Trout=O;
922          else Trout->AddFriend(S);          else Trout->AddFriend(S);
# Line 519  TTree *PamLevel2::GetPamTree(TFile *f, T Line 926  TTree *PamLevel2::GetPamTree(TFile *f, T
926      // Neutron Detector      // Neutron Detector
927      TTree *N = (TTree*)f->Get("NeutronD");      TTree *N = (TTree*)f->Get("NeutronD");
928      if(N && ND) {      if(N && ND) {
929          N->SetBranchAddress("NDLevel2", GetPointerToND());          N->SetBranchAddress("NDLevel2", GetPointerTo("NDLevel2"));
930          cout << "NeutronD     : set branch address NDLevel2"<<endl;          cout << "NeutronD     : set branch address NDLevel2"<<endl;
931          if(!Trout)Trout=O;          if(!Trout)Trout=O;
932          else Trout->AddFriend(N);          else Trout->AddFriend(N);
# Line 529  TTree *PamLevel2::GetPamTree(TFile *f, T Line 936  TTree *PamLevel2::GetPamTree(TFile *f, T
936      // Anticounters      // Anticounters
937      TTree *A = (TTree*)f->Get("Anticounter");      TTree *A = (TTree*)f->Get("Anticounter");
938      if(A && AC) {      if(A && AC) {
939          A->SetBranchAddress("AcLevel2", GetPointerToAc());          A->SetBranchAddress("AcLevel2", GetPointerTo("AcLevel2"));
940          cout << "Anticounter  : set branch address AcLevel2"<<endl;          cout << "Anticounter  : set branch address AcLevel2"<<endl;
941          if(!Trout)Trout=O;          if(!Trout)Trout=O;
942          else Trout->AddFriend(A);          else Trout->AddFriend(A);
# Line 537  TTree *PamLevel2::GetPamTree(TFile *f, T Line 944  TTree *PamLevel2::GetPamTree(TFile *f, T
944          cout << "Anticounter  : missing tree"<<endl;          cout << "Anticounter  : missing tree"<<endl;
945      };      };
946      // Orbital Info      // Orbital Info
947          TTree *B = (TTree*)f->Get("OrbitalInfo");      TTree *B = (TTree*)f->Get("OrbitalInfo");
948          if(B && ORB) {      if(B && ORB) {
949                  B->SetBranchAddress("OrbitalInfo", GetPointerToOrb());          B->SetBranchAddress("OrbitalInfo", GetPointerTo("OrbitalInfo"));
950                  cout << "OrbitalInfo  : set branch address OrbitalInfo"<<endl;          cout << "OrbitalInfo  : set branch address OrbitalInfo"<<endl;
951                  if(!Trout)Trout=O;          if(!Trout)Trout=O;
952                  else Trout->AddFriend(B);          else Trout->AddFriend(B);
953          }else{      }else{
954                  cout << "OrbitalInfo  : missing tree"<<endl;          cout << "OrbitalInfo  : missing tree"<<endl;
955          };      };
956    
957        TTree *L = (TTree*)f->Get("SelectionList");
958        if(L && SELLI==1) {
959    //      L->SetBranchAddress("RunEntry",&irun);
960    //      cout << "SelectionList: set branch address RunEntry"<<endl;
961    //      L->SetBranchAddress("EventEntry",&irunentry);
962    //      cout << "SelectionList: set branch address EventEntry"<<endl;
963    //      if(!Trout)Trout=O;
964    //      else Trout->AddFriend("SelectionList");
965            cout << " TTree *PamLevel2::GetPamTree(TFile, TString) >>> SelectionList not implemente!!!!"<<endl;
966            sel_tree = 0;
967        }else{
968            cout << "SelectionList  : missing tree"<<endl;
969        };
970            
971          cout<<endl<<" Number of entries: "<<Trout->GetEntries()<<endl<<endl;      cout<<endl<<" Number of entries: "<<Trout->GetEntries()<<endl<<endl;
972            
973          return Trout;      pam_tree = (TChain*)Trout;
974        
975        return Trout;
976            
977  }  }
978  //--------------------------------------  //--------------------------------------
# Line 574  TList*  PamLevel2::GetListOfLevel2Files( Line 997  TList*  PamLevel2::GetListOfLevel2Files(
997      TList *contents  = new TList; // create output list      TList *contents  = new TList; // create output list
998      contents->SetOwner();      contents->SetOwner();
999            
1000      char *fullpath;  //    char *fullpath;
1001    //    const char *fullpath;
1002            
1003      // if no input file list is given:        // if no input file list is given:  
1004      if ( flisttxt != "" ){      if ( flisttxt != "" ){
1005                    
1006          if( !gSystem->IsFileInIncludePath(flisttxt,&fullpath) )return 0;  //      if( !gSystem->IsFileInIncludePath(flisttxt,&fullpath) ){        
1007            //      if( !(fullpath = gSystem->FindFile("./",flisttxt)) ){
1008  //              flisttxt = gSystem->ConcatFileName(gSystem->DirName(flisttxt),gSystem->BaseName(flisttxt));  //          cout <<"File "<<flisttxt<<" not found"<<endl;
1009          flisttxt = fullpath;  //          return 0;
1010            //      }      
1011          if( !gSystem->ChangeDirectory(ddir) )return 0;  //      flisttxt = fullpath;
1012          if ( !flisttxt.EndsWith(".root") ){
1013    
1014            flisttxt = gSystem->ConcatFileName(gSystem->DirName(flisttxt),gSystem->BaseName(flisttxt));
1015    
1016            if( !gSystem->ChangeDirectory(ddir) ){
1017                cout << "Cannot change directory : "<<ddir<<endl;
1018                return 0;
1019            }
1020                    
1021          cout <<"Input file list : " << flisttxt <<endl;          cout <<"Input file list : " << flisttxt <<endl;
1022          ifstream in;          ifstream in;
1023          in.open(flisttxt, ios::in); //open input file list          in.open(flisttxt, ios::in); //open input file list
1024            if(!in.good()){
1025                cout <<" ERROR opening the file "<<endl;
1026                gSystem->ChangeDirectory(wdir); // back to the working directory
1027                return 0;
1028            }      
1029            int line=0;
1030          while (1) {          while (1) {
1031              TString file;              TString file;
1032              in >> file;              in >> file;
1033              if (!in.good()) break;              if (!in.good()) break;
1034              if( gSystem->IsFileInIncludePath(file,&fullpath) ){              line++;
1035  //                              contents->Add(new TSystemDirectory(fullpath,ddir)); // add file to the list  //          cout <<"(1) " << file << endl;
1036  //                              contents->Add(new TSystemFile(fullpath,ddir)); // add file to the list              if(file.IsNull()){
1037                    cout << "-- list interrupted at line "<<line <<endl;
1038                    break;
1039                }
1040                if(file.Contains("#"))file = file(0,file.First("#"));
1041    //          cout <<"(2) " << file << endl;
1042    //          if( gSystem->IsFileInIncludePath(file,&fullpath) ){
1043    //          if( (fullpath = gSystem->FindFile(ddir,file)) ){
1044                if( file.EndsWith(".root") ){
1045                    char *fullpath = gSystem->ConcatFileName(gSystem->DirName(ddir),gSystem->BaseName(file));
1046                  contents->Add(new TSystemFile(fullpath,gSystem->DirName(fullpath)));// add file to the list                  contents->Add(new TSystemFile(fullpath,gSystem->DirName(fullpath)));// add file to the list
1047              }else{                  delete fullpath;
1048                  cout << "warning! --- File "<<file<<" does not exists"<< endl;              }
1049              };  //          }else{
1050    //              if(file.Data()!="")cout << "File: "<<file<<" ---> missing "<< endl;
1051    //          };
1052          };          };
1053          in.close();          in.close();
1054                  } else {
1055              char *fullpath = gSystem->ConcatFileName(gSystem->DirName(flisttxt),gSystem->BaseName(flisttxt));
1056              contents->Add(new TSystemFile(fullpath,gSystem->DirName(fullpath)));// add file to the list
1057              delete fullpath;
1058          };        
1059      }else{      }else{
1060                    
1061          cout << "No input file list given."<<endl;          cout << "No input file list given."<<endl;
# Line 621  TList*  PamLevel2::GetListOfLevel2Files( Line 1074  TList*  PamLevel2::GetListOfLevel2Files(
1074          while ( (questo = (TSystemFile*) next()) ) {          while ( (questo = (TSystemFile*) next()) ) {
1075              TString name =  questo-> GetName();              TString name =  questo-> GetName();
1076              if( name.EndsWith(".root") ){              if( name.EndsWith(".root") ){
1077                  char *fullpath;  //              const char *fullpath = gSystem->FindFile(ddir,name);
1078                  gSystem->IsFileInIncludePath(name,&fullpath);  //              char *fullpath;
1079    //              gSystem->IsFileInIncludePath(name,&fullpath);
1080                    char *fullpath = gSystem->ConcatFileName(gSystem->DirName(ddir),gSystem->BaseName(name));
1081                  contents->Add(new TSystemFile(fullpath,gSystem->DirName(fullpath)));                  contents->Add(new TSystemFile(fullpath,gSystem->DirName(fullpath)));
1082                    delete fullpath;
1083              };              };
1084          }          }
1085          delete temp;          delete temp;
# Line 633  TList*  PamLevel2::GetListOfLevel2Files( Line 1089  TList*  PamLevel2::GetListOfLevel2Files(
1089      gSystem->ChangeDirectory(wdir); // back to the working directory      gSystem->ChangeDirectory(wdir); // back to the working directory
1090  //      cout << endl << "Selected files:" << endl;  //      cout << endl << "Selected files:" << endl;
1091  //      contents->Print();  //      contents->Print();
1092      cout << contents->GetEntries()<<" files selected\n";      cout << contents->GetEntries()<<" files \n";
1093  //      cout << endl;  //      cout << endl;
1094  //      cout << "Working directory: "<< gSystem->WorkingDirectory()<< endl;  //      cout << "Working directory: "<< gSystem->WorkingDirectory()<< endl;
1095      return contents;      return contents;
# Line 648  TList*  PamLevel2::GetListOfLevel2Files( Line 1104  TList*  PamLevel2::GetListOfLevel2Files(
1104   * @param detlist String to select trees to be included   * @param detlist String to select trees to be included
1105   * @return Pointer to a TChain   * @return Pointer to a TChain
1106   */   */
1107  TChain *PamLevel2::GetPamTree(TList *fl, TString detlist="+ALL"){  TChain *PamLevel2::GetPamTree(TList *fl, TString detlist ){
   
 //      TChain *Tout=0;  
     if(Tout)Tout->Delete();  
     Tout = NULL;  
1108            
1109        TChain *Trout =0;
1110    
1111    //    if( !detlist.IsNull() )SetWhichTrees(detlist);
1112      SetWhichTrees(detlist);      SetWhichTrees(detlist);
1113            
1114        cout<< "GetPamTree(TList*,TString): input detector list --> ";
1115        if(TRK1)cout<<"TRK1 ";
1116        if(TRK2)cout<<"TRK2 ";
1117        if(TRKh)cout<<"TRKH ";
1118        if(CAL1)cout<<"CAL1 ";
1119        if(CAL2)cout<<"CAL2 ";
1120        if(TOF)cout<<"TOF ";
1121        if(TRG)cout<<"TRG ";
1122        if(AC)cout<<"AC ";
1123        if(ND)cout<<"ND ";
1124        if(S4)cout<<"S4 ";
1125        if(ORB)cout<<"ORB ";
1126        cout << endl;
1127    
1128      TChain *T = 0;            TChain *T = 0;      
1129      TChain *C = 0;      TChain *C = 0;
1130      TChain *O = 0;      TChain *O = 0;
# Line 664  TChain *PamLevel2::GetPamTree(TList *fl, Line 1133  TChain *PamLevel2::GetPamTree(TList *fl,
1133      TChain *N = 0;      TChain *N = 0;
1134      TChain *A = 0;      TChain *A = 0;
1135      TChain *B = 0;      TChain *B = 0;
1136    
1137        TChain *L = 0;
1138            
1139      if(TRK) T = new TChain("Tracker");        if(TRK2||TRK1||TRKh) T = new TChain("Tracker");    
1140      if(CAL) C = new TChain("Calorimeter");      if(CAL2||CAL1)       C = new TChain("Calorimeter");
1141      if(TOF) O = new TChain("ToF");      if(TOF)              O = new TChain("ToF");
1142      if(TRG) R = new TChain("Trigger");      if(TRG)              R = new TChain("Trigger");
1143      if(S4)  S = new TChain("S4");      if(S4)               S = new TChain("S4");
1144      if(ND)  N = new TChain("NeutronD");      if(ND)               N = new TChain("NeutronD");
1145      if(AC)  A = new TChain("Anticounter");      if(AC)               A = new TChain("Anticounter");
1146      if(ORB) B = new TChain("OrbitalInfo");      if(ORB)              B = new TChain("OrbitalInfo");
1147    
1148         L = new TChain("SelectionList");
1149            
1150      // loop over files and create chains              // loop over files and create chains        
1151      TIter next(fl);      TIter next(fl);
1152      TSystemFile *questo = 0;      TSystemFile *questo = 0;
1153      while ( (questo = (TSystemFile*) next()) ) {      while ( (questo = (TSystemFile*) next()) ) {
1154          TString name =  questo->GetName();          TString name =  questo->GetName();
1155  //              cout << "File: "<< name << endl;          cout << "File: "<< name << endl;
1156          if( CheckLevel2File(name) ){          if( CheckLevel2File(name) ){
1157              if(TRK) T->Add(name);              if(TRK2||TRK1||TRKh) T->Add(name);
1158              if(CAL) C->Add(name);              if(CAL1||CAL2)       C->Add(name);
1159              if(TOF) O->Add(name);              if(TOF)              O->Add(name);
1160              if(TRG) R->Add(name);              if(TRG)              R->Add(name);
1161              if(S4)  S->Add(name);              if(S4)               S->Add(name);
1162              if(ND)  N->Add(name);              if(ND)               N->Add(name);
1163              if(AC)  A->Add(name);              if(AC)               A->Add(name);
1164              if(ORB) B->Add(name);              if(ORB)              B->Add(name);
1165                if(SELLI==1)         L->Add(name);
1166          };          };
1167      }      }
1168            
1169      cout << "done chain \n";      cout << "done chain \n";
1170    
1171    //    UInt_t *found=0;
1172    // Tracker
1173        if(T && (TRK2||TRK1||TRKh)) {
1174            if(TRK2)T->SetBranchAddress("TrkLevel2", GetPointerTo("TrkLevel2"));
1175    //      else    T->SetBranchStatus("TrkLevel2",0,found);
1176            if(TRK2)cout << "Tracker      : set branch address TrkLevel2"<<endl;
1177            if(TRK1)T->SetBranchAddress("TrkLevel1", GetPointerTo("TrkLevel1"));
1178    //      else    T->SetBranchStatus("TrkLevel1",0,found);
1179            if(TRK1)cout << "Tracker      : set branch address TrkLevel1"<<endl;
1180            if(TRKh)T->SetBranchAddress("TrkHough", GetPointerTo("TrkHough"));
1181    //      else    T->SetBranchStatus("TrkHough",0,found);
1182            if(TRKh)cout << "Tracker      : set branch address TrkHough"<<endl;
1183            if(!Trout)Trout=T;
1184            else Trout->AddFriend("Tracker");
1185        }else{
1186            cout << "Tracker      : missing tree"<<endl;
1187        };
1188        // Calorimeter
1189        if(C && (CAL2||CAL1)) {
1190            if(CAL2)C->SetBranchAddress("CaloLevel2", GetPointerTo("CaloLevel2"));
1191    //      else    C->SetBranchStatus("CaloLevel2",0,found);
1192            if(CAL2)cout << "Calorimeter  : set branch address CaloLevel2"<<endl;
1193            if(CAL1)C->SetBranchAddress("CaloLevel1", GetPointerTo("CaloLevel1"));
1194    //      else    C->SetBranchStatus("CaloLevel1",0,found);
1195            if(CAL1)cout << "Calorimeter  : set branch address CaloLevel1"<<endl;
1196            if(!Trout)Trout=C;
1197            else Trout->AddFriend("Calorimeter");
1198        }else{
1199            cout << "Calorimeter  : missing tree"<<endl;
1200        };
1201        // ToF    
1202        if(O && TOF) {
1203            O->SetBranchAddress("ToFLevel2", GetPointerTo("ToFLevel2"));
1204            cout << "ToF          : set branch address ToFLevel2"<<endl;
1205            if(!Trout)Trout=O;
1206            else Trout->AddFriend("ToF");
1207        }else{
1208            cout << "ToF         : missing tree"<<endl;
1209        };
1210        // Trigger
1211        if(R && TRG) {
1212            R->SetBranchAddress("TrigLevel2", GetPointerTo("TrigLevel2"));
1213            cout << "Trigger      : set branch address TrigLevel2"<<endl;
1214            if(!Trout)Trout=O;
1215            else Trout->AddFriend("Trigger");
1216        }else{
1217            cout << "Trigger      : missing tree"<<endl;
1218        };
1219        // S4
1220        if(S && S4) {
1221            S->SetBranchAddress("S4Level2", GetPointerTo("S4Level2"));
1222            cout << "S4           : set branch address S4Level2"<<endl;
1223            if(!Trout)Trout=O;
1224            else Trout->AddFriend("S4");
1225        }else{
1226            cout << "S4           : missing tree"<<endl;
1227        };
1228        // Neutron Detector
1229        if(N && ND) {
1230            N->SetBranchAddress("NDLevel2", GetPointerTo("NDLevel2"));
1231            cout << "NeutronD     : set branch address NDLevel2"<<endl;
1232            if(!Trout)Trout=O;
1233            else Trout->AddFriend("NeutronD");
1234        }else{
1235            cout << "NeutronD     : missing tree"<<endl;
1236        };
1237        // Anticounters
1238        if(A && AC) {
1239            A->SetBranchAddress("AcLevel2", GetPointerTo("AcLevel2"));
1240            cout << "Anticounter  : set branch address AcLevel2"<<endl;
1241            if(!Trout)Trout=O;
1242            else Trout->AddFriend("Anticounter");
1243        }else{
1244            cout << "Anticounter  : missing tree"<<endl;
1245        };
1246        // Orbital Info
1247        if(B && ORB) {
1248            B->SetBranchAddress("OrbitalInfo", GetPointerTo("OrbitalInfo"));
1249            cout << "OrbitalInfo  : set branch address OrbitalInfo"<<endl;
1250            if(!Trout)Trout=O;
1251            else Trout->AddFriend("OrbitalInfo");
1252        }else{
1253            cout << "OrbitalInfo  : missing tree"<<endl;
1254        };
1255    
1256        // Selection List
1257        if(L && SELLI==1) {
1258            cout<<">>> Found selection-list <<<"<<endl;
1259            L->SetBranchAddress("RunEntry",&irun);
1260            cout << "SelectionList: set branch address RunEntry"<<endl;
1261            L->SetBranchAddress("EventEntry",&irunentry);
1262            cout << "SelectionList: set branch address EventEntry"<<endl;
1263            sel_tree = L;
1264    //      if(!Trout)Trout=O;
1265    //      else Trout->AddFriend("SelectionList");
1266        }else{
1267    //      cout << "SelectionList  : missing tree"<<endl;
1268            if(L)L->Delete();
1269        };
1270        
1271    //    cout<<endl<<" Number of entries: "<<Trout->GetEntries()<<endl<<endl;
1272    
1273        pam_tree = Trout;
1274    
1275        return Trout;
1276    }
1277    
1278    
1279    
1280    //--------------------------------------
1281    //
1282    //
1283    //--------------------------------------
1284    /**
1285     * Set branch addresses for Pamela friend trees
1286     */
1287    void PamLevel2::SetBranchAddress(TTree *t){
1288    
1289        TRK2    = TRK2 & t->GetBranchStatus("TrkLevel2");
1290        TRK1    = TRK1 & t->GetBranchStatus("TrkLevel1");
1291        TRKh    = TRKh & t->GetBranchStatus("TrkHough");
1292        CAL2    = CAL2 & t->GetBranchStatus("CaloLevel2");
1293        CAL1    = CAL1 & t->GetBranchStatus("CaloLevel1");
1294        TOF    = TOF & t->GetBranchStatus("ToFLevel2");
1295        TRG    = TRG & t->GetBranchStatus("TrigLevel2");
1296        S4     = S4  & t->GetBranchStatus("S4Level2");
1297        ND     = ND  & t->GetBranchStatus("NDLevel2");
1298        AC     = AC  & t->GetBranchStatus("AcLevel2");
1299        ORB    = ORB & t->GetBranchStatus("OrbitalInfo");
1300    
1301    
1302      // Tracker      // Tracker
1303      if(TRK) if(!Tout)Tout=T;      if(TRK1) {
1304            t->SetBranchAddress("TrkLevel1", GetPointerTo("TrkLevel2"));
1305            cout << "Tracker      : set branch address TrkLevel1"<<endl;
1306        };
1307        if(TRK2) {
1308            t->SetBranchAddress("TrkLevel2", GetPointerTo("TrkLevel1"));
1309            cout << "Tracker      : set branch address TrkLevel2"<<endl;
1310        };
1311        if(TRKh) {
1312            t->SetBranchAddress("TrkHough", GetPointerTo("TrkHough"));
1313            cout << "Tracker      : set branch address TrkHough"<<endl;
1314        };
1315        
1316      // Calorimeter      // Calorimeter
1317      if(CAL) {                if(CAL1) {
1318          if(!Tout)Tout=C;          t->SetBranchAddress("CaloLevel1", GetPointerTo("CaloLevel1"));
1319          else Tout->AddFriend("Calorimeter");          cout << "Calorimeter  : set branch address CaloLevel1"<<endl;
1320        };
1321        if(CAL2) {
1322            t->SetBranchAddress("CaloLevel2", GetPointerTo("CaloLevel2"));
1323            cout << "Calorimeter  : set branch address CaloLevel2"<<endl;
1324      };      };
1325        
1326      // ToF          // ToF    
1327      if(TOF) {      if(TOF) {
1328          if(!Tout)Tout=O;          t->SetBranchAddress("ToFLevel2", GetPointerTo("ToFLevel2"));
1329          else Tout->AddFriend("ToF");          cout << "ToF          : set branch address ToFLevel2"<<endl;
1330      };      };
1331      // Trigger      // Trigger
1332      if(TRG) {      if(TRG) {
1333          if(!Tout)Tout=O;          t->SetBranchAddress("TrigLevel2", GetPointerTo("TrigLevel2"));
1334          else Tout->AddFriend("Trigger");          cout << "Trigger      : set branch address TrigLevel2"<<endl;
1335      };      };
1336      // S4      // S4
1337      if(S4) {      if(S4) {
1338          if(!Tout)Tout=O;          t->SetBranchAddress("S4Level2", GetPointerTo("S4Level2"));
1339          else Tout->AddFriend("S4");          cout << "S4           : set branch address S4Level2"<<endl;
1340      };      };
1341      // Neutron Detector      // Neutron Detector
1342      if(ND) {      if(ND) {
1343          if(!Tout)Tout=O;          t->SetBranchAddress("NDLevel2", GetPointerTo("NDLevel2"));
1344          else Tout->AddFriend("NeutronD");          cout << "NeutronD     : set branch address NDLevel2"<<endl;
1345      };      };
1346      // Anticounters      // Anticounters
1347      if(AC) {      if(AC) {
1348          if(!Tout)Tout=O;          t->SetBranchAddress("AcLevel2", GetPointerTo("AcLevel2"));
1349          else Tout->AddFriend("Anticounter");          cout << "Anticounter  : set branch address AcLevel2"<<endl;
1350      };      };
1351      // OrbitalInfo      // OrbitalInfo
1352      if(ORB) {      if(ORB) {
1353          if(!Tout)Tout=O;          t->SetBranchAddress("OrbitalInfo", GetPointerTo("OrbitalInfo"));
1354          else Tout->AddFriend("OrbitalInfo");          cout << "OrbitalInfo  : set branch address OrbitalInfo"<<endl;
1355        };
1356        // SelectionList
1357        if(SELLI==1) {
1358            t->SetBranchAddress("RunEntry", &irun);
1359            cout << "SelectionList: set branch address RunEntry"<<endl;
1360            t->SetBranchAddress("EventEntry", &irunentry);
1361            cout << "SelectionList: set branch address EventEntry"<<endl;
1362      };      };
1363            
 //    cout<<endl<<" Number of entries: "<<Tout->GetEntries()<<endl<<endl;  
       
     if( Tout->GetEntries() )PamLevel2::SetBranchAddress();  
       
     return Tout;  
1364  }  }
 //--------------------------------------  
 //  
 //  
 //--------------------------------------  
1365  /**  /**
1366   * Set branch addresses for Pamela friend trees   * Set branch addresses for Pamela friend trees
1367   */   */
1368  void PamLevel2::SetBranchAddress(){  void PamLevel2::SetBranchAddress(TChain *t){
1369    
1370        TRK2    = TRK2 & t->GetBranchStatus("TrkLevel2");
1371        TRK1    = TRK1 & t->GetBranchStatus("TrkLevel1");
1372        TRKh    = TRKh & t->GetBranchStatus("TrkHough");
1373        CAL1    = CAL1 & t->GetBranchStatus("CaloLevel1");
1374        CAL2    = CAL2 & t->GetBranchStatus("CaloLevel2");
1375        TOF    = TOF & t->GetBranchStatus("ToFLevel2");
1376        TRG    = TRG & t->GetBranchStatus("TrigLevel2");
1377        S4     = S4  & t->GetBranchStatus("S4Level2");
1378        ND     = ND  & t->GetBranchStatus("NDLevel2");
1379        AC     = AC  & t->GetBranchStatus("AcLevel2");
1380        ORB    = ORB & t->GetBranchStatus("OrbitalInfo");
1381    
1382      // Tracker      // Tracker
1383      if(TRK) {       if(TRK2) {
1384          if(TRK_L1){          t->SetBranchAddress("TrkLevel2", GetPointerTo("TrkLevel2"));
             Tout->SetBranchAddress("TrkLevel1", GetPointerToTrk(1));  
             cout << "Tracker      : set branch address TrkLevel1"<<endl;  
         };  
         Tout->SetBranchAddress("TrkLevel2", GetPointerToTrk(2));  
1385          cout << "Tracker      : set branch address TrkLevel2"<<endl;          cout << "Tracker      : set branch address TrkLevel2"<<endl;
1386      };      };
1387        if(TRK1) {
1388            t->SetBranchAddress("TrkLevel1", GetPointerTo("TrkLevel1"));
1389            cout << "Tracker      : set branch address TrkLevel1"<<endl;
1390        };
1391         if(TRKh) {
1392            t->SetBranchAddress("TrkHough", GetPointerTo("TrkHough"));
1393            cout << "Tracker      : set branch address TrkHough"<<endl;
1394         };
1395            
1396      // Calorimeter      // Calorimeter
1397      if(CAL) {      if(CAL2) {
1398          Tout->SetBranchAddress("CaloLevel2", GetPointerToCalo());          t->SetBranchAddress("CaloLevel2", GetPointerTo("CaloLevel2"));
1399          cout << "Calorimeter  : set branch address CaloLevel2"<<endl;          cout << "Calorimeter  : set branch address CaloLevel2"<<endl;
1400        };  
1401        if(CAL1) {
1402            t->SetBranchAddress("CaloLevel1", GetPointerTo("CaloLevel1"));
1403            cout << "Calorimeter  : set branch address CaloLevel1"<<endl;
1404      };      };
1405            
1406      // ToF          // ToF    
1407      if(TOF) {      if(TOF) {
1408          Tout->SetBranchAddress("ToFLevel2", GetPointerToToF());          t->SetBranchAddress("ToFLevel2", GetPointerTo("ToFLevel2"));
1409          cout << "ToF          : set branch address ToFLevel2"<<endl;          cout << "ToF          : set branch address ToFLevel2"<<endl;
1410      };      };
1411      // Trigger      // Trigger
1412      if(TRG) {      if(TRG) {
1413          Tout->SetBranchAddress("TrigLevel2", GetPointerToTrig());          t->SetBranchAddress("TrigLevel2", GetPointerTo("TrigLevel2"));
1414          cout << "Trigger      : set branch address TrigLevel2"<<endl;          cout << "Trigger      : set branch address TrigLevel2"<<endl;
1415      };      };
1416      // S4      // S4
1417      if(S4) {      if(S4) {
1418          Tout->SetBranchAddress("S4Level2", GetPointerToS4());          t->SetBranchAddress("S4Level2", GetPointerTo("S4Level2"));
1419          cout << "S4           : set branch address S4Level2"<<endl;          cout << "S4           : set branch address S4Level2"<<endl;
1420      };      };
1421      // Neutron Detector      // Neutron Detector
1422      if(ND) {      if(ND) {
1423          Tout->SetBranchAddress("NDLevel2", GetPointerToND());          t->SetBranchAddress("NDLevel2", GetPointerTo("NDLevel2"));
1424          cout << "NeutronD     : set branch address NDLevel2"<<endl;          cout << "NeutronD     : set branch address NDLevel2"<<endl;
1425      };      };
1426      // Anticounters      // Anticounters
1427      if(AC) {      if(AC) {
1428          Tout->SetBranchAddress("AcLevel2", GetPointerToAc());          t->SetBranchAddress("AcLevel2", GetPointerTo("AcLevel2"));
1429          cout << "Anticounter  : set branch address AcLevel2"<<endl;          cout << "Anticounter  : set branch address AcLevel2"<<endl;
1430      };      };
1431      // OrbitalInfo      // OrbitalInfo
1432      if(ORB) {      if(ORB) {
1433          Tout->SetBranchAddress("OrbitalInfo", GetPointerToOrb());          t->SetBranchAddress("OrbitalInfo", GetPointerTo("OrbitalInfo"));
1434          cout << "OrbitalInfo  : set branch address OrbitalInfo"<<endl;          cout << "OrbitalInfo  : set branch address OrbitalInfo"<<endl;
1435      };      };
1436        // SelectionList
1437        if(SELLI==1) {
1438            t->SetBranchAddress("RunEntry", &irun);
1439            cout << "SelectionList: set branch address RunEntry"<<endl;
1440            t->SetBranchAddress("EventEntry", &irunentry);
1441            cout << "SelectionList: set branch address EventEntry"<<endl;
1442        };
1443            
1444  }  }
1445    
1446  //--------------------------------------  
 //  
 //  
 //--------------------------------------  
 void *PamLevel2::GetPointerTo(const char* c ){  
 //      cout << "objname "<< objname << endl;  
     TString objname = c;  
     if(!objname.CompareTo("TrkLevel1"))return &trk_l1_obj;  
     if(!objname.CompareTo("TrkLevel2"))return &trk_obj;  
       
     return NULL;  
 };  
1447  //--------------------------------------  //--------------------------------------
1448  //  //
1449  //  //
# Line 830  TChain *PamLevel2::GetRunTree(TList *fl) Line 1467  TChain *PamLevel2::GetRunTree(TList *fl)
1467              R->Add(name);              R->Add(name);
1468          };          };
1469      }      }
1470    
1471        if(R->GetNtrees()){
1472            
1473      R->SetBranchAddress("RunInfo", GetPointerToRun());          R->SetBranchAddress("RunInfo", GetPointerTo("RunInfo"));
1474      cout << "Run         : set branch address RunInfo"<<endl;          cout << "Run         : set branch address RunInfo"<<endl;
1475                R->SetBranchAddress("SoftInfo", GetPointerTo("SoftInfo")); // Emiliano
1476            cout << "Software    : set branch address SoftInfo"<<endl; // Emiliano
1477        }else{
1478            delete R;
1479            R=0;
1480        }
1481    
1482        run_tree = R;
1483    
1484      return R;      return R;
1485            
1486  }  }
# Line 848  TChain *PamLevel2::GetRunTree(TList *fl) Line 1495  TChain *PamLevel2::GetRunTree(TList *fl)
1495   */   */
1496  TTree *PamLevel2::GetRunTree(TFile *f){  TTree *PamLevel2::GetRunTree(TFile *f){
1497    
1498        cout << "TTree *PamLevel2::GetRunTree(TFile *f) -- obsolte "<<endl;
1499    
1500      TTree *R = (TTree*)f->Get("Run");      TTree *R = (TTree*)f->Get("Run");
1501            
1502      R->SetBranchAddress("RunInfo", GetPointerToRun());      if(R){
1503      cout << "Run         : set branch address RunInfo"<<endl;          R->SetBranchAddress("RunInfo", GetPointerTo("RunInfo"));
1504                cout << "Run         : set branch address RunInfo"<<endl;
1505            R->SetBranchAddress("SoftInfo", GetPointerTo("SoftInfo")); // Emiliano
1506            cout << "Software    : set branch address SoftInfo"<<endl; // Emiliano
1507        }
1508    
1509        run_tree = (TChain*)R;
1510    
1511      return R;      return R;
1512            
1513  }  }
1514    /**
1515     * Update the runinfo informations (to be used to have Run infos event by event basis)
1516     * @param run Pointer to the chain/tree which contains run infos
1517     * @return true if a new run has been read, false if it is still the same run
1518     */
1519    Bool_t PamLevel2::UpdateRunInfo(TChain *run, ULong64_t iev){
1520      //
1521      // check if we have already called once GetEntry, if not call it
1522      //
1523      if ( run->GetEntries() <= 0 ) return(false);
1524      //
1525      
1526      Int_t oldrun = irun;
1527      // --------------------------------------
1528      // if it is a full file (not preselected)
1529      // --------------------------------------
1530      if(SELLI==0){
1531          if ( irun < 0 ){
1532              irun = 0;
1533              run->GetEntry(irun);
1534              runfirstentry = 0ULL;
1535              runlastentry += (ULong64_t)(this->GetRunInfo()->NEVENTS) - 1ULL;
1536              return(true);
1537          };      
1538    
1539          if( !GetOrbitalInfo() ){
1540              cout << "Bool_t PamLevel2::UpdateRunInfo(TChain *run, ULong64_t iev) -- ERROR -- missing OrbitalInfo "<<endl;
1541              return(false);
1542          }
1543          // modificato il controllo sull'aggiornamento del run, per evitare problemi
1544          // dovuti agli eventi annidati (NB! NEVENTS conta anche questi!!)
1545          while ( GetOrbitalInfo()->absTime > GetRunInfo()->RUNTRAILER_TIME && irun < run->GetEntries() ){
1546    //      while ( iev > (runfirstentry+(ULong64_t)(this->GetRunInfo()->NEVENTS-1)) && irun < run->GetEntries() ){
1547              //    printf(" iev %llu %u %llu \n",iev,this->GetRunInfo()->NEVENTS,(ULong64_t)(runfirstentry+(ULong64_t)(this->GetRunInfo()->NEVENTS)));
1548              irun++;
1549              run->GetEntry(irun);
1550              runfirstentry = runlastentry+1ULL;
1551              runlastentry += (ULong64_t)(this->GetRunInfo()->NEVENTS);
1552          };
1553          
1554          //
1555          if
1556     ( irun == oldrun || irun >= run->GetEntries() ) return(false);
1557          //
1558          //  printf(" iev %llu irun %i nevents %u 1st %llu last %llu \n",iev,irun,this->GetRunInfo()->NEVENTS,(ULong64_t)runfirstentry,(ULong64_t)runlastentry);
1559          //
1560          return(true);    
1561      };
1562      // ----------------------------------------------------
1563      // if it is a preselected file (there is SelectionList)
1564      // NBNB - the event tree MUST be read first
1565      // ----------------------------------------------------
1566      if(SELLI==1){      
1567          sel_tree->GetEntry(iev);
1568          if(irun != oldrun){
1569              run->GetEntry(irun);
1570              return true;
1571          }
1572          return false;
1573      }
1574    
1575      return false;
1576      //
1577    };
1578    /**
1579     * Update the runinfo informations (to be used to have Run infos event by event basis)
1580     * @param run Pointer to the chain/tree which contains run infos
1581     * @return true if a new run has been read, false if it is still the same run
1582     */
1583    Bool_t PamLevel2::UpdateRunInfo(TTree *run, ULong64_t iev){
1584      return(UpdateRunInfo((TChain*)run,iev));
1585    };
1586    
1587  //--------------------------------------  //--------------------------------------
1588  //  //
1589  //  //
1590  //--------------------------------------  //--------------------------------------
1591  /**  /**
1592   * Set which trees should be analysed   * Set which trees shoul be analysed
1593   * @param detlist TString containing the sequence of trees required   * @param detlist TString containing the sequence of trees required
1594  */  */
1595  void PamLevel2::SetWhichTrees(TString detlist){  void PamLevel2::SetWhichTrees(TString detlist){
1596                    
1597      if(detlist.Contains("+ALL", TString::kIgnoreCase)){      if(detlist.IsNull() || detlist.Contains("+ALL", TString::kIgnoreCase)){
1598          CAL = true;          CAL0 = false;
1599          TRK = true;          CAL1 = true;
1600          TRK_L1 = false;          CAL2 = true;
1601            TRK2 = true;
1602            TRK1 = false;
1603            TRKh = false;
1604            TRK0 = false;
1605          TRG = true;          TRG = true;
1606          TOF = true;          TOF = true;
1607            TOF0 = false;
1608          S4  = true;          S4  = true;
1609          ND  = true;          ND  = true;
1610          AC  = true;          AC  = true;
1611          ORB = true;          ORB = true;
1612      }else if( detlist.Contains("-ALL", TString::kIgnoreCase) ){      }else if( detlist.Contains("-ALL", TString::kIgnoreCase) ){
1613          CAL = false;          CAL0 = false;
1614          TRK = false;          CAL1 = false;
1615          TRK_L1 = false;          CAL2 = false;
1616            TRK2 = false;
1617            TRK1 = false;
1618            TRKh = false;
1619            TRK0 = false;
1620          TRG = false;          TRG = false;
1621          TOF = false;          TOF = false;
1622            TOF0 = false;
1623          S4  = false;          S4  = false;
1624          ND  = false;          ND  = false;
1625          AC  = false;          AC  = false;
1626          ORB = false;          ORB = false;
1627      };      };
1628            
1629      if( detlist.Contains("-CAL", TString::kIgnoreCase) )CAL = false;  //  -------------------------------------------------------------------------
1630      else if( detlist.Contains("+CAL", TString::kIgnoreCase) )CAL = true;      if( detlist.Contains("CAL1", TString::kIgnoreCase) ){
1631                if ( detlist.Contains("-CAL1", TString::kIgnoreCase) )CAL1=false;
1632      if( detlist.Contains("-TRK", TString::kIgnoreCase) )TRK = false;          if ( detlist.Contains("+CAL1", TString::kIgnoreCase) )CAL1=true;
1633      else if( detlist.Contains("+TRK", TString::kIgnoreCase) )TRK = true;      };
1634        
1635      if( detlist.Contains("-TRK1", TString::kIgnoreCase) )TRK_L1 = false;      if( detlist.Contains("CAL0", TString::kIgnoreCase) ){
1636      else if( detlist.Contains("+TRK1", TString::kIgnoreCase) )TRK_L1 = true;          if ( detlist.Contains("-CAL0", TString::kIgnoreCase) )CAL0=false;
1637            if ( detlist.Contains("+CAL0", TString::kIgnoreCase) )CAL0=true;
1638        };
1639            
1640        if( detlist.Contains("CAL2", TString::kIgnoreCase)){
1641            if ( detlist.Contains("-CAL2", TString::kIgnoreCase) )CAL2=false;
1642            if ( detlist.Contains("+CAL2", TString::kIgnoreCase) )CAL2=true;
1643        };
1644            
1645        if( detlist.Contains("+CAL", TString::kIgnoreCase) && !CAL1 && !CAL2 )CAL2=true;
1646        if( detlist.Contains("-CAL", TString::kIgnoreCase) && CAL1 && CAL2 ){
1647            CAL2=false;
1648            CAL1=false;
1649        }
1650    //  -------------------------------------------------------------------------
1651        if( detlist.Contains("TRK0", TString::kIgnoreCase) ){
1652            if ( detlist.Contains("-TRK0", TString::kIgnoreCase) )TRK0=false;
1653            if ( detlist.Contains("+TRK0", TString::kIgnoreCase) )TRK0=true;
1654        };
1655    
1656        if( detlist.Contains("TRK1", TString::kIgnoreCase) ){
1657            if ( detlist.Contains("-TRK1", TString::kIgnoreCase) )TRK1=false;
1658            if ( detlist.Contains("+TRK1", TString::kIgnoreCase) )TRK1=true;
1659        };
1660            
1661        if( detlist.Contains("TRK2", TString::kIgnoreCase)){
1662            if ( detlist.Contains("-TRK2", TString::kIgnoreCase) )TRK2=false;
1663            if ( detlist.Contains("+TRK2", TString::kIgnoreCase) )TRK2=true;
1664        };
1665    
1666        if( detlist.Contains("TRKh", TString::kIgnoreCase)){
1667            if ( detlist.Contains("-TRKh", TString::kIgnoreCase) )TRKh=false;
1668            if ( detlist.Contains("+TRKh", TString::kIgnoreCase) )TRKh=true;
1669        };
1670            
1671        if( detlist.Contains("+TRK", TString::kIgnoreCase) && !TRK1 && !TRK2 && !TRKh )TRK2=true;
1672        if( detlist.Contains("-TRK", TString::kIgnoreCase) && TRK1 && TRK2 && TRKh){
1673            TRK2=false;
1674            TRK1=false;
1675            TRKh=false;
1676        }
1677    //  -------------------------------------------------------------------------
1678            
1679      if( detlist.Contains("-TRG", TString::kIgnoreCase) )TRG = false;      if( detlist.Contains("-TRG", TString::kIgnoreCase) )TRG = false;
1680      else if( detlist.Contains("+TRG", TString::kIgnoreCase) )TRG = true;      else if( detlist.Contains("+TRG", TString::kIgnoreCase) )TRG = true;
1681            
1682      if( detlist.Contains("-TOF", TString::kIgnoreCase) )TOF = false;      if( detlist.Contains("-TOF", TString::kIgnoreCase) )TOF = false;
1683      else if( detlist.Contains("+TOF", TString::kIgnoreCase) )TOF = true;      else if( detlist.Contains("+TOF", TString::kIgnoreCase) )TOF = true;
1684    
1685        if( detlist.Contains("-TOF0", TString::kIgnoreCase) )TOF0 = false;
1686        else if( detlist.Contains("+TOF0", TString::kIgnoreCase) )TOF0 = true;
1687            
1688      if( detlist.Contains("-S4",  TString::kIgnoreCase) )S4  = false;      if( detlist.Contains("-S4",  TString::kIgnoreCase) )S4  = false;
1689      else if( detlist.Contains("+S4",  TString::kIgnoreCase) )S4  = true;      else if( detlist.Contains("+S4",  TString::kIgnoreCase) )S4  = true;
# Line 915  void PamLevel2::SetWhichTrees(TString de Line 1696  void PamLevel2::SetWhichTrees(TString de
1696            
1697      if( detlist.Contains("-ORB", TString::kIgnoreCase) )ORB = false;      if( detlist.Contains("-ORB", TString::kIgnoreCase) )ORB = false;
1698      else if( detlist.Contains("+ORB", TString::kIgnoreCase) )ORB = true;      else if( detlist.Contains("+ORB", TString::kIgnoreCase) )ORB = true;
1699    
1700    //     cout<< "Set detector list --> ";
1701    //     if(TRK1)cout<<"TRK1 ";
1702    //     if(TRK2)cout<<"TRK2 ";
1703    //     if(TRKh)cout<<"TRKH ";
1704    //     if(CAL1)cout<<"CAL1 ";
1705    //     if(CAL2)cout<<"CAL2 ";
1706    //     if(TOF)cout<<"TOF ";
1707    //     if(TRG)cout<<"TRG ";
1708    //     if(AC)cout<<"AC ";
1709    //     if(ND)cout<<"ND ";
1710    //     if(S4)cout<<"S4 ";
1711    //     if(ORB)cout<<"ORB ";
1712    //     cout << endl;
1713            
1714  };  };
1715    
1716    
1717    /**
1718     * Set tree/branch detector flags from the content of a tree
1719     */
1720    void  PamLevel2::GetWhichTrees(TFile* f){
1721        
1722    
1723    
1724        cout << "void  PamLevel2::GetWhichTrees(TFile* f) --- WARNING!! --- ...potrebbe non funzionare "<<endl;
1725        // -----------
1726        // reset flags
1727        // -----------
1728        CAL1   = false;    
1729        CAL2   = false;    
1730        TRK2   = false;    
1731        TRK1   = false;    
1732        TRKh   = false;    
1733        TRG    = false;    
1734        TOF    = false;    
1735        S4     = false;    
1736        ND     = false;    
1737        AC     = false;    
1738        ORB    = false;    
1739        
1740        RUN    = false;
1741            
1742        cout << "Checking file: "<<f->GetName()<<endl;
1743        if( !f || f->IsZombie() ){
1744            cout << "File: "<< f->GetName() <<" Non valid root file"<< endl;
1745            return;
1746        }
1747    
1748        TList *lk = f->GetListOfKeys();
1749        TIter next(lk);
1750        TKey *key =0;
1751    
1752        Int_t nev = 0;
1753    
1754        while( (key = (TKey*)next()) ){
1755            
1756            if( !strcmp(key->GetName(),"Run"        ) )RUN = true;
1757    
1758            //=========================================================    
1759            if( !strcmp(key->GetName(),"Trigger"    ) ){
1760                TRG = true;
1761                Int_t nevt = ((TTree*)f->Get("Trigger"))->GetEntries();
1762                if( nev && nevt!=nev){
1763                    cout << "File: "<< f->GetName() <<" Trigger tree has "<<nevt<<" events instead of "<<nev<< endl;
1764                    TRG = false;
1765                }else nev=nevt;
1766            }
1767            //=========================================================    
1768            if( !strcmp(key->GetName(),"ToF"        ) ){
1769                TOF = true;
1770                Int_t nevt = ((TTree*)f->Get("ToF"))->GetEntries();
1771                if( nev && nevt!=nev){
1772                    cout << "File: "<< f->GetName() <<"     ToF tree has "<<nevt<<" events instead of "<<nev<< endl;
1773                    TOF = false;
1774                }else nev=nevt;
1775            }
1776            //=========================================================  
1777            if( !strcmp(key->GetName(),"S4"         ) ){
1778                S4 = true;
1779                Int_t nevt = ((TTree*)f->Get("S4"))->GetEntries();
1780                if( nev && nevt!=nev){
1781                    cout << "File: "<< f->GetName() <<"      S4 tree has "<<nevt<<" events instead of "<<nev<< endl;
1782                    S4 = false;
1783                }else nev=nevt;
1784            }
1785            //=========================================================  
1786    
1787            if( !strcmp(key->GetName(),"NeutronD"   ) ){
1788                ND = true;
1789                Int_t nevt = ((TTree*)f->Get("NeutronD"))->GetEntries();
1790                if( nev && nevt!=nev){
1791                    cout << "File: "<< f->GetName() <<"NeutronD tree has "<<nevt<<" events instead of "<<nev<< endl;
1792                    ND =false;
1793                }else nev=nevt;
1794            }      
1795            //=========================================================  
1796            if( !strcmp(key->GetName(),"Anticounter") ){
1797                AC = true;
1798                Int_t nevt = ((TTree*)f->Get("Anticounter"))->GetEntries();
1799                if( nev && nevt!=nev){
1800                    cout << "File: "<< f->GetName() <<" Anticounter tree has "<<nevt<<" events instead of "<<nev<< endl;
1801                    AC =false;
1802                }else nev=nevt;
1803            }
1804            //=========================================================  
1805            if( !strcmp(key->GetName(),"OrbitalInfo") ){
1806                ORB = true;
1807                Int_t nevt = ((TTree*)f->Get("OrbitalInfo"))->GetEntries();
1808                if( nev && nevt!=nev){
1809                    cout << "File: "<< f->GetName() <<" OrbitalInfo tree has "<<nevt<<" events instead of "<<nev<< endl;
1810                    ORB = false;
1811                }else nev=nevt;
1812            }
1813            //=========================================================  
1814            if( !strcmp(key->GetName(),"Tracker"    ) ){
1815                TTree *T = (TTree*)f->Get("Tracker");
1816                for(Int_t i=0; i<T->GetListOfBranches()->GetEntries(); i++){
1817                    TString name = T->GetListOfBranches()->At(i)->GetName();
1818                    if( !name.CompareTo("TrkLevel1") )TRK1=true;
1819                    if( !name.CompareTo("TrkLevel2") )TRK2=true;
1820                    if( !name.CompareTo("TrkHough") )TRKh=true;
1821                };      
1822                Int_t nevt = T->GetEntries();
1823                if( nev && nevt!=nev){
1824                    cout << "File: "<< f->GetName() <<" Tracker tree has "<<nevt<<" events instead of "<<nev<< endl;
1825                    TRK1 = false;
1826                    TRK2 = false;
1827                    TRKh = false;
1828                }else nev=nevt;
1829                T->Delete();
1830            };
1831            //=========================================================  
1832            if( !strcmp(key->GetName(),"Calorimeter"    ) ){
1833                TTree *T = (TTree*)f->Get("Calorimeter");
1834                for(Int_t i=0; i<T->GetListOfBranches()->GetEntries(); i++){
1835                    TString name = T->GetListOfBranches()->At(i)->GetName();
1836                    if( !name.CompareTo("CaloLevel1") )CAL1=true;
1837                    if( !name.CompareTo("CaloLevel2") )CAL2=true;
1838                };    
1839                Int_t nevt = T->GetEntries();
1840                if( nev && nevt!=nev){
1841                    cout << "File: "<< f->GetName() <<"  Calorimeter tree has "<<nevt<<" events instead of "<<nev<< endl;
1842                    CAL1 = false;
1843                    CAL2 = false;
1844                }else nev=nevt;
1845                T->Delete();
1846            };      
1847    
1848        };
1849        
1850        delete lk;
1851    
1852    //     cout<< "Get detector list from input file --> ";
1853    //     if(TRK1)cout<<"TRK1 ";
1854    //     if(TRK2)cout<<"TRK2 ";
1855    //     if(TRKh)cout<<"TRKH ";
1856    //     if(CAL1)cout<<"CAL1 ";
1857    //     if(CAL2)cout<<"CAL2 ";
1858    //     if(TOF)cout<<"TOF ";
1859    //     if(TRG)cout<<"TRG ";
1860    //     if(AC)cout<<"AC ";
1861    //     if(ND)cout<<"ND ";
1862    //     if(S4)cout<<"S4 ";
1863    //     if(ORB)cout<<"ORB ";
1864    //     cout << endl;
1865          
1866        return ;
1867            
1868    };
1869    
1870    
1871  //--------------------------------------  //--------------------------------------
1872  //  //
1873  //  //
# Line 928  void PamLevel2::SetWhichTrees(TString de Line 1879  void PamLevel2::SetWhichTrees(TString de
1879   */   */
1880  Bool_t  PamLevel2::CheckLevel2File(TString name){  Bool_t  PamLevel2::CheckLevel2File(TString name){
1881                    
1882      Bool_t CAL__ok = false;          Bool_t CAL1__ok   = false;    
1883      Bool_t TRK__ok = false;          Bool_t CAL2__ok   = false;    
1884      Bool_t TRK_L1__ok = false;          Bool_t TRK2__ok   = false;    
1885      Bool_t TRG__ok = false;          Bool_t TRK1__ok   = false;    
1886      Bool_t TOF__ok = false;          Bool_t TRKh__ok   = false;    
1887      Bool_t S4__ok  = false;          Bool_t TRG__ok    = false;    
1888      Bool_t ND__ok  = false;          Bool_t TOF__ok    = false;    
1889      Bool_t AC__ok  = false;          Bool_t S4__ok     = false;    
1890      Bool_t ORB__ok = false;          Bool_t ND__ok     = false;    
1891        Bool_t AC__ok     = false;    
1892        Bool_t ORB__ok    = false;    
1893            
1894      Bool_t RUN__ok = false;      Bool_t RUN__ok    = false;
1895            
1896  //    cout << "Checking file: "<<name<<endl;      Bool_t SELLI__ok  = false;
1897    
1898        cout << "Checking file: "<<name<<endl;
1899      TFile *f = new TFile(name.Data());      TFile *f = new TFile(name.Data());
1900      if( !f || f->IsZombie() ){      if( !f || f->IsZombie() ){
1901          cout << "File: "<< f->GetName() <<" discarded ---- Non valid root file"<< endl; return false;          cout << "File: "<< f->GetName() <<" discarded ---- Non valid root file"<< endl; return false;
1902      }      }
1903      //   cout << "Get list of keys: "<<f<<endl;  //    cout << "Get list of keys: "<<f<<endl;
1904      TList *lk = f->GetListOfKeys();      TList *lk = f->GetListOfKeys();
1905  //      lk->Print();  //    lk->Print();
1906      TIter next(lk);      TIter next(lk);
1907      TKey *key =0;      TKey *key =0;
1908      Int_t nev =0;  
1909      Int_t nev_previous =0;      Int_t nev = 0;
1910    
1911      while( (key = (TKey*)next()) ){      while( (key = (TKey*)next()) ){
1912                    
1913          nev_previous = nev;  //      cout << key->GetName() << endl;
1914          nev = ((TTree*)f->Get(key->GetName()))->GetEntries();  //      cout << key->GetName() << ""<<key->GetClassName()<<endl;
1915          if( key->GetClassName()=="TTree" && nev_previous && nev != nev_previous ){  //              cout << " Get tree: " << f->Get(key->GetName())<<endl;
1916              cout << "File: "<< f->GetName() <<" discarded ---- "<< key->GetName() << " tree: n.entries does not match "<<nev<<" "<<nev_previous<< endl;  //      nev_previous = nev;
1917              return false;  //      cout << " n.entries  "<< nev <<endl;
1918          };  //      if( key->GetClassName()=="TTree" && nev_previous && nev != nev_previous ){
1919    //          nev = ((TTree*)f->Get(key->GetName()))->GetEntries();
1920    //          cout << "File: "<< f->GetName() <<" discarded ---- "<< key->GetName() << " tree: n.entries does not match "<<nev<<" "<<nev_previous<< endl;
1921    //          return false;
1922    //      };
1923    
1924    
         if( !strcmp(key->GetName(),"Calorimeter") )CAL__ok = true;  
         if( !strcmp(key->GetName(),"Trigger"    ) )TRG__ok = true;  
         if( !strcmp(key->GetName(),"ToF"        ) )TOF__ok = true;  
         if( !strcmp(key->GetName(),"S4"         ) )S4__ok = true;  
         if( !strcmp(key->GetName(),"NeutronD"   ) )ND__ok = true;  
         if( !strcmp(key->GetName(),"Anticounter") )AC__ok = true;  
         if( !strcmp(key->GetName(),"OrbitalInfo") )ORB__ok = true;  
1925          if( !strcmp(key->GetName(),"Run"        ) )RUN__ok = true;                if( !strcmp(key->GetName(),"Run"        ) )RUN__ok = true;      
1926    
1927            //=========================================================    
1928            if( !strcmp(key->GetName(),"SelectionList"    ) ){
1929                SELLI__ok = true;
1930                if(SELLI==1){
1931                    Int_t nevt = ((TTree*)f->Get("SelectionList"))->GetEntries();
1932                    if( nev && nevt!=nev){
1933                        cout << "File: "<< f->GetName() <<" discarded ---- SelectionList tree has "<<nevt<<" events instead of "<<nev<< endl;
1934                        return false;
1935                    }
1936                    nev=nevt;
1937                }
1938            }
1939    
1940            //=========================================================    
1941            if( !strcmp(key->GetName(),"Trigger"    ) ){
1942                TRG__ok = true;
1943                if(TRG){
1944                    Int_t nevt = ((TTree*)f->Get("Trigger"))->GetEntries();
1945                    if( nev && nevt!=nev){
1946                        cout << "File: "<< f->GetName() <<" discarded ---- Trigger tree has "<<nevt<<" events instead of "<<nev<< endl;
1947                        return false;
1948                    }
1949                    nev=nevt;
1950                }
1951            }
1952            //=========================================================    
1953            if( !strcmp(key->GetName(),"ToF"        ) ){
1954                TOF__ok = true;
1955                if(TOF){
1956                    Int_t nevt = ((TTree*)f->Get("ToF"))->GetEntries();
1957                    if( nev && nevt!=nev){
1958                        cout << "File: "<< f->GetName() <<" discarded ---- ToF tree has "<<nevt<<" events instead of "<<nev<< endl;
1959                        return false;
1960                    }
1961                    nev=nevt;
1962                }
1963            }
1964            //=========================================================  
1965            if( !strcmp(key->GetName(),"S4"         ) ){
1966                S4__ok = true;
1967                if(S4){
1968                    Int_t nevt = ((TTree*)f->Get("S4"))->GetEntries();
1969                    if( nev && nevt!=nev){
1970                        cout << "File: "<< f->GetName() <<" discarded ---- S4 tree has "<<nevt<<" events instead of "<<nev<< endl;
1971                        return false;
1972                    }
1973                    nev=nevt;
1974                }
1975            }
1976            //=========================================================  
1977    
1978            if( !strcmp(key->GetName(),"NeutronD"   ) ){
1979                ND__ok = true;
1980                if(ND){
1981                    Int_t nevt = ((TTree*)f->Get("NeutronD"))->GetEntries();
1982                    if( nev && nevt!=nev){
1983                        cout << "File: "<< f->GetName() <<" discarded ---- NeutronD tree has "<<nevt<<" events instead of "<<nev<< endl;
1984                        return false;
1985                    }
1986                    nev=nevt;
1987                }
1988            }      
1989            //=========================================================  
1990            if( !strcmp(key->GetName(),"Anticounter") ){
1991                AC__ok = true;
1992                if(AC){
1993                    Int_t nevt = ((TTree*)f->Get("Anticounter"))->GetEntries();
1994                    if( nev && nevt!=nev){
1995                        cout << "File: "<< f->GetName() <<" discarded ---- Anticounter tree has "<<nevt<<" events instead of "<<nev<< endl;
1996                        return false;
1997                    }
1998                    nev=nevt;
1999                }
2000            }
2001            //=========================================================  
2002            if( !strcmp(key->GetName(),"OrbitalInfo") ){
2003                ORB__ok = true;
2004                if(ORB){
2005                    Int_t nevt = ((TTree*)f->Get("OrbitalInfo"))->GetEntries();
2006                    if( nev && nevt!=nev){
2007                        cout << "File: "<< f->GetName() <<" discarded ---- OrbitalInfo tree has "<<nevt<<" events instead of "<<nev<< endl;
2008                        return false;
2009                    }
2010                    nev=nevt;
2011                }
2012            }
2013            //=========================================================  
2014          if( !strcmp(key->GetName(),"Tracker"    ) ){          if( !strcmp(key->GetName(),"Tracker"    ) ){
             TRK__ok = true;  
2015              TTree *T = (TTree*)f->Get("Tracker");              TTree *T = (TTree*)f->Get("Tracker");
2016                if(TRK1||TRK2||TRKh){
2017                    Int_t nevt = T->GetEntries();
2018                    if( nev && nevt!=nev){
2019                        cout << "File: "<< f->GetName() <<" discarded ---- Tracker tree has "<<nevt<<" events instead of "<<nev<< endl;
2020                        return false;
2021                    }
2022                    nev=nevt;
2023                }
2024              for(Int_t i=0; i<T->GetListOfBranches()->GetEntries(); i++){              for(Int_t i=0; i<T->GetListOfBranches()->GetEntries(); i++){
2025                  TString name = T->GetListOfBranches()->At(i)->GetName();                  TString name = T->GetListOfBranches()->At(i)->GetName();
2026                  if( !name.CompareTo("TrkLevel1") )TRK_L1__ok=true;                  if( !name.CompareTo("TrkLevel1") )TRK1__ok=true;
2027              };                  if( !name.CompareTo("TrkLevel2") )TRK2__ok=true;
2028                    if( !name.CompareTo("TrkHough") )TRKh__ok=true;
2029                };      
2030                T->Delete();
2031          };          };
2032                    //=========================================================  
2033            if( !strcmp(key->GetName(),"Calorimeter"    ) ){
2034                TTree *T = (TTree*)f->Get("Calorimeter");
2035                if(CAL1||CAL2){
2036                    Int_t nevt = T->GetEntries();
2037                    if( nev && nevt!=nev){
2038                        cout << "File: "<< f->GetName() <<" discarded ---- Calorimeter tree has "<<nevt<<" events instead of "<<nev<< endl;
2039                        return false;
2040                    }
2041                    nev=nevt;
2042                }
2043                for(Int_t i=0; i<T->GetListOfBranches()->GetEntries(); i++){
2044                    TString name = T->GetListOfBranches()->At(i)->GetName();
2045                    if( !name.CompareTo("CaloLevel1") )CAL1__ok=true;
2046                    if( !name.CompareTo("CaloLevel2") )CAL2__ok=true;
2047                };    
2048                T->Delete();
2049            };      
2050    
2051      };      };
2052    
2053        if( SELLI==-1 )SELLI = (Int_t)SELLI__ok;
2054        if( SELLI==0 && SELLI__ok ){
2055            cout << "File: "<< f->GetName() <<" discarded ---- found SelectionList (it is not a full-event file)" << endl;
2056            return false;  
2057        }
2058        if( SELLI==1 && !SELLI__ok ){
2059            cout << "File: "<< f->GetName() <<" discarded ---- SelectionList missing" << endl;
2060            return false;
2061        }
2062            
2063      lk->Delete();  //    cout << "SELLI "<<SELLI<<endl;
2064      f->Close();  
2065        //     cout<< "CheckLevel2File(TString): detector list --> ";
2066      Bool_t FLAG = true;  //     if(TRK1__ok)cout<<"TRK1 ";
2067    //     if(TRK2__ok)cout<<"TRK2 ";
2068    //     if(TRKh__ok)cout<<"TRKH ";
2069    //     if(CAL1__ok)cout<<"CAL1 ";
2070    //     if(CAL2__ok)cout<<"CAL2 ";
2071    //     if(TOF__ok)cout<<"TOF ";
2072    //     if(TRG__ok)cout<<"TRG ";
2073    //     if(AC__ok)cout<<"AC ";
2074    //     if(ND__ok)cout<<"ND ";
2075    //     if(S4__ok)cout<<"S4 ";
2076    //     if(ORB__ok)cout<<"ORB ";
2077    //     cout << endl;
2078    
2079    
2080        if(TRK2 && TRK1__ok)TRK1=1;
2081    // ----------------------------------------------------------------------------
2082    // NOTA
2083    // se c'e` il level1, lo devo necessarimente leggere.
2084    // infatti (non ho capito perche`) i cluster vengono letti e allocati in memoria
2085    // comunque, ma non vengono disallocati da PamLevel2::Clear()
2086    // ----------------------------------------------------------------------------
2087    
2088    
2089      if(!RUN__ok) {      if(!RUN__ok) {
2090          cout << "File: "<< f->GetName() <<" discarded ---- Missing RunInfo tree"<< endl; return false;          cout << "File: "<< f->GetName() <<" *WARNING* ---- Missing RunInfo tree"<< endl;
2091  //      FLAG = false;  //      return false;
2092      };      };
2093      if(CAL && !CAL__ok){  
2094          cout << "File: "<< f->GetName() <<" discarded ---- Missing Calorimeter tree"<< endl; return false;      if(CAL1 && !CAL1__ok){
2095  //      FLAG = false;          cout << "File: "<< f->GetName() <<" discarded ---- Missing CaloLevel1 branch"<< endl;
2096      };          return false;
     if(TRK && !TRK__ok){  
         cout << "File: "<< f->GetName() <<" discarded ---- Missing Tracker tree"<< endl; return false;  
 //      FLAG = false;  
     };  
     if(TRK_L1 && !TRK_L1__ok){  
         cout << "File: "<< f->GetName() <<" discarded ---- Missing Tracker Level1 Branch"<< endl; return false;  
 //      FLAG = false;  
2097      };      };
2098      if(TRG && !TRG__ok){      if(CAL2 && !CAL2__ok){
2099          cout << "File: "<< f->GetName() <<" discarded ---- Missing Trigger tree"<< endl; return false;          cout << "File: "<< f->GetName() <<" discarded ---- Missing CaloLevel2 branch"<< endl;
2100  //      FLAG = false;          return false;
2101      };      };
2102      if(TOF && !TOF__ok){      if(TRK2 && !TRK2__ok){
2103          cout << "File: "<< f->GetName() <<" discarded ---- Missing ToF tree"<< endl; return false;          cout << "File: "<< f->GetName() <<" discarded ---- Missing TrkLevel2 branch"<< endl;
2104  //      FLAG = false;          return false;
2105      };      };
2106      if(S4 && !S4__ok){      if(TRK1 && !TRK1__ok){
2107          cout << "File: "<< f->GetName() <<" discarded ---- Missing S4 tree"<< endl; return false;          cout << "File: "<< f->GetName() <<" discarded ---- Missing TrkLevel1 branch"<< endl;
2108  //      FLAG = false;          return false;
2109      };      };
2110      if(ND && !ND__ok){      if(TRKh && !TRKh__ok){
2111          cout << "File: "<< f->GetName() <<" discarded ---- Missing ND tree"<< endl; return false;          cout << "File: "<< f->GetName() <<" discarded ---- Missing TrkHough branch"<< endl;
2112  //      FLAG = false;          return false;
2113        };
2114        if(ORB && !ORB__ok){
2115            cout << "File: "<< f->GetName() <<" discarded ---- Missing ORB tree"<< endl;
2116            return false;
2117      };      };
2118      if(AC && !AC__ok){      if(AC && !AC__ok){
2119          cout << "File: "<< f->GetName() <<" discarded ---- Missing AC tree"<< endl; return false;          cout << "File: "<< f->GetName() <<" discarded ---- Missing AC tree"<< endl;
2120  //      FLAG = false;          return false;
2121      };      };
2122      if(ORB && !ORB__ok){      if(S4 && !S4__ok){
2123          cout << "File: "<< f->GetName() <<" discarded ---- Missing ORB tree"<< endl; return false;          cout << "File: "<< f->GetName() <<" discarded ---- Missing S4 tree"<< endl;
2124  //      FLAG = false;          return false;
2125        };
2126        if(TOF && !TOF__ok){
2127            cout << "File: "<< f->GetName() <<" discarded ---- Missing ToF tree"<< endl;
2128            return false;
2129        };
2130    
2131        if(ND && !ND__ok){
2132            cout << "File: "<< f->GetName() <<" discarded ---- Missing ND tree"<< endl;
2133            return false;
2134        };
2135        if(TRG && !TRG__ok){
2136            cout << "File: "<< f->GetName() <<" discarded ---- Missing Trigger tree"<< endl;
2137            return false;
2138      };      };
2139            
2140      return FLAG;  
2141    //    lk->Delete();
2142    //    delete lk;
2143        f->Close();
2144    
2145    //     cout<< "CheckLevel2File(TString): detector list --> ";
2146    //     if(TRK1)cout<<"TRK1 ";
2147    //     if(TRK2)cout<<"TRK2 ";
2148    //     if(TRKh)cout<<"TRKH ";
2149    //     if(CAL1)cout<<"CAL1 ";
2150    //     if(CAL2)cout<<"CAL2 ";
2151    //     if(TOF)cout<<"TOF ";
2152    //     if(TRG)cout<<"TRG ";
2153    //     if(AC)cout<<"AC ";
2154    //     if(ND)cout<<"ND ";
2155    //     if(S4)cout<<"S4 ";
2156    //     if(ORB)cout<<"ORB ";
2157    //     cout << endl;
2158          
2159        return true;
2160                    
2161  };  };
2162    
2163    
2164    /**
2165     * Create clone-trees
2166     */
2167    void PamLevel2::CreateCloneTrees0( TChain *fChain, TFile *ofile ){
2168    
2169        cout << "+--+--+--+--+--+--+--+--+--+--+--+--+--+--+--+--+--+" <<endl;
2170        cout << "Create clones of PAMELA trees "<<endl;
2171        
2172        Int_t i=0;
2173        pam_tree_clone[i] = fChain->GetTree()->CloneTree(0);
2174        TString name =  pam_tree_clone[i]->GetName();
2175        name.Append("_clone");
2176    //    pam_tree_clone[i]->SetName(name.Data());
2177        cout << pam_tree_clone[i]->GetName() <<endl;
2178        i++;
2179    
2180        TList *li = fChain->GetListOfFriends();
2181        TIter next(li);
2182        TFriendElement* T_friend=0;
2183        ofile->cd();
2184        while( (T_friend = (TFriendElement*)next()) ){
2185    //      cout<<T_friend->IsA()->GetName()<<" "<<T_friend->GetName()<<hex << T_friend->GetTree() << dec<<endl;
2186    //      cout<<T_friend->GetTree()->GetName()<< endl;
2187            pam_tree_clone[i] = T_friend->GetTree()->CloneTree(0);
2188            pam_tree_clone[i]->SetAutoSave(1000000);
2189            name =  pam_tree_clone[i]->GetName();
2190            name.Append("_clone");
2191    //      pam_tree_clone[i]->SetName(name.Data());
2192            cout << pam_tree_clone[i]->GetName() << endl;
2193            i++;
2194        }
2195        
2196        delete li;
2197    
2198        cout << "+--+--+--+--+--+--+--+--+--+--+--+--+--+--+--+--+--+" <<endl;
2199    
2200    }
2201    
2202    /**
2203     * Create clone-trees
2204     */
2205    void PamLevel2::CreateCloneTrees(TFile *ofile){
2206    
2207        ofile->cd();
2208    
2209        cout << "+--+--+--+--+--+--+--+--+--+--+--+--+--+--+--+--+--+" <<endl;
2210        cout << "Create new PAMELA trees "<<endl;
2211            
2212    
2213        run_tree_clone = new TTree("Run","PAMELA Level2 data from the GL_RUN table ");
2214        run_tree_clone->Branch("RunInfo","GL_RUN",GetPointerTo("RunInfo"));
2215        cout << "Run          : branch RunInfo"<<endl;
2216        run_tree_clone->Branch("SoftInfo","SoftInfo",GetPointerTo("SoftInfo"));
2217        cout << "Run          : branch SoftInfo"<<endl;
2218                
2219    
2220    
2221        sel_tree_clone = new TTree("SelectionList","List of selected events ");
2222        sel_tree_clone->Branch("RunEntry",&irun,"runentry/I");
2223        sel_tree_clone->Branch("EventEntry",&irunentry,"eventry/I");
2224        
2225    
2226        Int_t i=0;
2227        if(TRK1||TRK2||TRKh){
2228            pam_tree_clone[i] = new TTree("Tracker","PAMELA tracker level2 data ");
2229            if(TRK1) {
2230                pam_tree_clone[i]->Branch("TrkLevel1","TrkLevel1", GetPointerTo("TrkLevel1"));
2231                pam_tree_clone[i]->BranchRef();
2232                cout << "Tracker      : branch TrkLevel1"<<endl;
2233                cout << "CreateCloneTrees " << GetTrkLevel1()<<endl;
2234            };
2235            if(TRK2) {
2236                pam_tree_clone[i]->Branch("TrkLevel2", "TrkLevel2",GetPointerTo("TrkLevel2"));
2237                cout << "Tracker      : branch TrkLevel2"<<endl;        
2238            };
2239            if(TRKh) {
2240                pam_tree_clone[i]->Branch("TrkHough","TrkHough", GetPointerTo("TrkHough"));
2241                cout << "Tracker      : branch TrkHough"<<endl;
2242            };
2243            i++;
2244        }
2245    
2246        // Calorimeter
2247        if(CAL1||CAL2){
2248            pam_tree_clone[i] = new TTree("Calorimeter","PAMELA calorimeter level2 data ");
2249            if(CAL1) {
2250                pam_tree_clone[i]->Branch("CaloLevel1", "CaloLevel1", GetPointerTo("CaloLevel1"));
2251                cout << "Calorimeter  : branch CaloLevel1"<<endl;
2252            };
2253            if(CAL2) {
2254                pam_tree_clone[i]->Branch("CaloLevel2","CaloLevel2", GetPointerTo("CaloLevel2"));
2255                cout << "Calorimeter  : branch CaloLevel2"<<endl;
2256            };
2257            i++;
2258        }    
2259    
2260        // ToF    
2261        if(TOF) {
2262            pam_tree_clone[i] = new TTree("ToF","PAMELA ToF level2 data ");
2263            pam_tree_clone[i]->Branch("ToFLevel2","ToFLevel2", GetPointerTo("ToFLevel2"));
2264            cout << "ToF          : branch ToFLevel2"<<endl;
2265            i++;
2266        };
2267        // Trigger
2268        if(TRG) {
2269            pam_tree_clone[i] = new TTree("Trigger","PAMELA trigger level2 data ");
2270            pam_tree_clone[i]->Branch("TrigLevel2","TrigLevel2", GetPointerTo("TrigLevel2"));
2271            cout << "Trigger      : branch TrigLevel2"<<endl;
2272            i++;
2273        };
2274        // S4
2275        if(S4) {
2276            pam_tree_clone[i] = new TTree("S4","PAMELA S4 level2 data ");  
2277            pam_tree_clone[i]->Branch("S4Level2","S4Level2", GetPointerTo("S4Level2"));
2278            cout << "S4           : branch S4Level2"<<endl;
2279            i++;
2280        };
2281        // Neutron Detector
2282        if(ND) {
2283            pam_tree_clone[i] = new TTree("NeutronD","PAMELA neutron detector level2 data ");      
2284            pam_tree_clone[i]->Branch("NDLevel2","NDLevel2", GetPointerTo("NDLevel2"));
2285            cout << "NeutronD     : branch NDLevel2"<<endl;
2286            i++;
2287        };
2288        // Anticounters
2289        if(AC) {
2290            pam_tree_clone[i] = new TTree("Anticounter","PAMELA anticounter detector level2 data ");        
2291            pam_tree_clone[i]->Branch("AcLevel2","AcLevel2", GetPointerTo("AcLevel2"));
2292            cout << "Anticounter  : branch AcLevel2"<<endl;
2293            i++;
2294        };
2295        // OrbitalInfo
2296        if(ORB) {
2297            pam_tree_clone[i] = new TTree("OrbitalInfo","PAMELA oribital info  ");  
2298            pam_tree_clone[i]->Branch("OrbitalInfo","OrbitalInfo", GetPointerTo("OrbitalInfo"));
2299            cout << "OrbitalInfo  : branch OrbitalInfo"<<endl;
2300            i++;
2301        };
2302        cout << "+--+--+--+--+--+--+--+--+--+--+--+--+--+--+--+--+--+" <<endl;
2303    
2304    }
2305    
2306    
2307    /**
2308     * Fill tree (created with CreateCloneTrees)
2309     *
2310     */
2311    //void PamLevel2::FillNewPamTree(TTree *T){
2312    void PamLevel2::FillCloneTrees(){
2313        
2314    //    cout << "PamLevel2::FillCloneTrees()" << irunentry << endl;
2315    
2316        for(Int_t i=0; i<NCLONES; i++){
2317            if(pam_tree_clone[i])pam_tree_clone[i]->Fill();
2318        }
2319        if(sel_tree_clone)sel_tree_clone->Fill();    
2320    
2321    }
2322    
2323    
2324    TTree* PamLevel2::GetCloneTree(TString name){
2325    
2326        for(Int_t i=0; i<NCLONES; i++){    
2327            if(pam_tree_clone[i]){
2328                TString na = pam_tree_clone[i]->GetName();
2329                if(!name.CompareTo(na))return pam_tree_clone[i];
2330            };
2331        }
2332        if(run_tree_clone){
2333            TString na = run_tree_clone->GetName();
2334            if(!name.CompareTo(na))return run_tree_clone;
2335        }
2336        if(sel_tree_clone){
2337            TString na = sel_tree_clone->GetName();
2338            if(!name.CompareTo(na))return sel_tree_clone;
2339        }
2340        return NULL;
2341    
2342    }
2343    void PamLevel2::WriteCloneTrees(){
2344        cout << "+--+--+--+--+--+--+--+--+--+--+--+--+--+--+--+--+--+" <<endl;
2345        cout << "Write clones of PAMELA trees "<<endl;
2346        cout << run_tree_clone->GetName()<<endl;    
2347        run_tree_clone->Write();
2348        cout << sel_tree_clone->GetName()<<endl;    
2349        sel_tree_clone->Write();
2350        for(Int_t i=0; i<NCLONES; i++){    
2351            if(pam_tree_clone[i]){
2352                cout << pam_tree_clone[i]->GetName()<<endl;
2353                pam_tree_clone[i]->Write();
2354            };
2355        }
2356        cout << "+--+--+--+--+--+--+--+--+--+--+--+--+--+--+--+--+--+" <<endl;
2357    
2358    }
2359    
2360    /**
2361     * Method to get level2-trees entry, the corresponding run entry and (if required) the level0 entry.
2362     */
2363    Int_t PamLevel2::GetEntry(Int_t iee){
2364        
2365        if(!pam_tree){
2366            cout << " Int_t PamLevel2::GetEntry(Int_t) -- ERROR -- level2 trees not loaded"<<endl;
2367            return 0;
2368        }
2369    
2370    
2371        //
2372        // This is a sort of bug: if you don't have the run tree you don't want to exit here you want to have loaded the event anyway...
2373        //
2374        //    if(!run_tree ){
2375        //  cout << " Int_t PamLevel2::GetEntry(Int_t) -- ERROR -- run tree not loeaded"<<endl;
2376        //  return 0;
2377        //    }
2378    
2379        Int_t ii=0;
2380        //-------------------------------
2381        ii = iee;
2382        if( !pam_tree->GetEntry(ii) ) return 0;
2383    
2384        //
2385        // ... that's way I put it here. Notice that nothing change in the code (is backward compatible) since in any case you return with 0.
2386        // in theory one would like to return 1 if run is not loaded but now I don't have the will to add that 2 lines of code and it is not
2387        // a problem if you don't check the return code of getentry.
2388        //
2389        if(!run_tree ){
2390            if ( TRK0 || CAL0 || TOF0 || RUN ) { //forse cosi` va bene per tornare 1?
2391                    cout << " Int_t PamLevel2::GetEntry(Int_t) -- ERROR -- run tree not loaded"<<endl;
2392                    return 0;
2393            }  else {
2394                    return 1; //cosi` se non c'e` run esce qua...
2395            }
2396        }
2397    
2398        //-------------------------------
2399        ii = iee;
2400        Bool_t UPDATED = UpdateRunInfo(run_tree,ii);
2401        if(SELLI==0)irunentry = iee-runfirstentry;
2402        if(UPDATED && run_tree_clone)run_tree_clone->Fill();
2403    
2404    //    cout << "PamLevel2::GetEntry("<<iee<<") "<<irun<<" "<<runfirstentry<<" "<<irunentry<<endl;
2405    
2406        if( TRK0 || CAL0 || TOF0 )GetYodaEntry( );
2407    
2408        return 1;
2409    
2410    }
2411    
2412    /**
2413     * Method to retrieve the level0 tree (YODA tree) that contains the current event.
2414     * Given the run ID (...), if needed it query the DB and load the proper file.
2415     * @return Pointer to the tree
2416     */
2417    
2418    
2419    TTree* PamLevel2::GetYodaTree( ){
2420        
2421    //    cout << "TTree* PamLevel2::GetYodaTree( )"<<endl;
2422        //===================================
2423        // check if iroot has changed
2424        //===================================
2425        if( irun<0 ){
2426            cout << "PamLevel2::GetYodaTree() -- ERROR "<<endl;
2427            cout << "In order to use this method you have to load the RunInfo tree "<<endl;
2428            cout << "with the method TChain* PamLevel2::GetRunTree(TString, TString)"<<endl;
2429    //      cout << " - read the event with PamLevel2::GetEntry(Int_t)"<<endl;
2430            return NULL;
2431        }    
2432        Int_t irootnew = run_obj->ID_ROOT_L0;
2433    //     cout << "iroot    "<<iroot<<endl;
2434    //     cout << "irootnew "<<irootnew<<endl;
2435    
2436        //===================================
2437        // load the level0 file
2438        // (if not already loaded)
2439        //===================================
2440        if( iroot != irootnew || !l0_tree){
2441            iroot = irootnew;
2442            //===================================
2443            // open the DB connection
2444            // (if not already opened)
2445            //===================================
2446            if(!dbc || (dbc && !dbc->IsConnected())){
2447                cout<<"~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~"<<endl;
2448                cout<<"Connecting to DB"<<endl;
2449                cout<<"HOST "<<host<<endl;
2450                cout<<"USER "<<user<<endl;
2451                cout<<"PSW  "<<psw<<endl;
2452                dbc = TSQLServer::Connect(host.Data(),user.Data(),psw.Data());
2453                if( !dbc )return NULL;
2454                if( !dbc->IsConnected() )return NULL;    
2455    //          cout<<"...done"<<endl;
2456                cout<<"~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~"<<endl;
2457            }else{
2458    //          cout<<"DB already connected"<<endl;
2459            }
2460            GL_ROOT glroot = GL_ROOT();
2461            if( glroot.Query_GL_ROOT(iroot,dbc) ){
2462                cout << "TTree* PamLevel2::GetYodaTree( ) -- ERROR -- level0 file iroot = "<<iroot<< " does not exists"<<endl;
2463                return NULL;
2464            };
2465            TString filename = glroot.PATH + glroot.NAME;
2466            if(l0_file){
2467                l0_file->Close();
2468                l0_file->Delete();
2469            }
2470            cout << "Opening LEVEL0 file: "<< filename << endl;
2471            FileStat_t t;
2472            if( gSystem->GetPathInfo(filename.Data(),t) ){
2473                cout << " PamLevel2::GetYodaTree() -- ERROR opening file "<<endl;
2474                return NULL;
2475            }
2476            l0_file = new TFile(filename);
2477            if( !l0_file )return NULL;
2478            l0_tree = (TTree*)l0_file->Get("Physics");
2479            if(!h0_obj)h0_obj = new EventHeader();
2480            l0_tree->SetBranchAddress("Header" ,&h0_obj);
2481            //---------------------------------------------------
2482            // TRACKER:
2483            if(TRK0){
2484                if(!trk0_obj){
2485                    trk0_obj = new TrkLevel0();
2486                    trk0_obj->Set();
2487                };
2488                l0_tree->SetBranchAddress("Tracker" ,trk0_obj->GetPointerToTrackerEvent());
2489            }
2490            //---------------------------------------------------
2491            // CALORIMETER:
2492            if(CAL0){
2493                cout << "PamLevel2::GetYodaTree() --- level0 calorimeter not implemented "<<endl;
2494            }
2495            //---------------------------------------------------
2496            // TOF:
2497            if(TOF0){
2498                cout << "PamLevel2::GetYodaTree() --- level0 TOF not implemented "<<endl;
2499            }
2500    
2501        };
2502    
2503        if(!dbc || (dbc && !dbc->IsConnected())){
2504            cout << " TTree* PamLevel2::GetYodaTree( ) -- no DB connected... hai fatto qualche cazzata "<<endl;
2505        }
2506    
2507        TrkParams::SetCalib(run_obj,dbc);
2508    
2509    
2510    //    cout << l0_tree << endl;
2511        
2512        return l0_tree;
2513    
2514    }
2515    
2516    /**
2517     * Method to retrieve the level0 tree (YODA tree) that contains the current event.
2518     */
2519    Int_t PamLevel2::GetYodaEntry(){
2520    
2521    //    cout << "Int_t PamLevel2::GetYodaEntry()"<<endl;
2522        if(!GetYodaTree())return 0;
2523        
2524        // patch
2525        if( (Int_t)irunentry < 0){
2526            cout << "Int_t PamLevel2::GetYodaEntry() -- ATTENZIONE -- irunentry negativo?!?! "<<(Int_t)irunentry<<endl;
2527            irunentry=0;
2528        }
2529        //  ---------------------------------
2530        //  if file is NOT a preselected file
2531        //  ---------------------------------
2532        UInt_t quellagiusta = irunentry + run_obj->EV_FROM;
2533        
2534    
2535    //     cout << " irun "<< irun << " irunentry "<< irunentry<<" run_obj->EV_FROM "<<run_obj->EV_FROM <<" quella giusta "<<quellagiusta << endl;
2536    //     cout << " iroot "<<iroot<<" run_obj->ID_ROOT_L0 "<<run_obj->ID_ROOT_L0<<endl;
2537    //     cout << " time "<< GetOrbitalInfo()->absTime << endl;
2538    //     cout << " trk_calib_used "<<run_obj->TRK_CALIB_USED<< endl;
2539        
2540        if( !GetOrbitalInfo() ){
2541            cout << "Int_t PamLevel2::GetYodaEntry() -- ERROR -- missing OrbitalInfo "<<endl;
2542            return 0;
2543        }
2544    
2545        // ---------------------------------------------------------------------
2546        // ATTENTION!!!
2547        // If data are not pre-processed with cleaner, the level0 tree may contain
2548        // spurious nested physics packets.
2549        // The GL_RUN variables EV_FROM, EV_TO and NEVENTS counts also these entries
2550        // while level2 tree DOES NOT!!
2551        // This means that "quellagiusta" in these cases is not correct.
2552        // In order to retrieve the correct level0 event, I implemented a check
2553        // of the OBT and pkt-number. In case of mismatch, the level0 entry number
2554        // is shift forward until when the packets match.
2555        // ---------------------------------------------------------------------
2556        Int_t answer = 0;
2557        Int_t shift =0;
2558        do{
2559            if(shift>0){
2560                cout << " level0 <--> level2 mismatch ( irun "<<irun<<" irunentry "<<irunentry<<" shift "<<shift<<" )"<<endl;
2561            }
2562            answer = l0_tree->GetEntry(quellagiusta+shift);
2563            shift++;
2564            if( !GetEventHeader() ){
2565                cout << "Int_t PamLevel2::GetYodaEntry() -- ERROR -- missing EventHeader "<<endl;
2566                return 0;
2567            }
2568    //      if( (quellagiusta+shift) == l0_tree->GetEntries()+1 )cout << ">>> end of level0 tree <<<"<<endl;
2569    //      cout << " GetOrbitalInfo()->OBT "<< GetOrbitalInfo()->OBT << endl;
2570    //      cout << " GetEventHeader()->GetPscuHeader()->GetOrbitalTime() "<< GetEventHeader()->GetPscuHeader()->GetOrbitalTime() << endl;
2571    //      cout << " GetOrbitalInfo()->pkt_num "<< GetOrbitalInfo()->pkt_num << endl;
2572    //      cout << " GetEventHeader()->GetPscuHeader()->GetCounter() "<< GetEventHeader()->GetPscuHeader()->GetCounter() << endl;
2573    
2574        }while( ( GetOrbitalInfo()->OBT != (UInt_t)(GetEventHeader()->GetPscuHeader()->GetOrbitalTime()) || GetOrbitalInfo()->pkt_num != (UInt_t)(GetEventHeader()->GetPscuHeader()->GetCounter())) && (quellagiusta+shift) < GetYodaTree()->GetEntries() );
2575    
2576    //    cout << "LA ENTRY GIUSTA E`: "<<quellagiusta<<" (spero...)"<<endl;
2577    //    return GetYodaTree()->GetEntry(quellagiusta);
2578        
2579        return answer;
2580        
2581    }

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