/[PAMELA software]/PamelaLevel2/src/PamLevel2.cpp
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Diff of /PamelaLevel2/src/PamLevel2.cpp

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revision 1.1 by pam-fi, Fri Jun 16 16:43:55 2006 UTC revision 1.20 by pam-fi, Fri Feb 16 15:00:35 2007 UTC
# Line 7  Line 7 
7   * Default constructor   * Default constructor
8   */   */
9  PamTrack::PamTrack(){  PamTrack::PamTrack(){
10      trk_track  = this->TrkTrack::GetTrkTrack();      trk_track  = 0;
11      calo_track = this->CaloTrkVar::GetCaloTrkVar();      calo_track = 0;
12      tof_track  = this->ToFTrkVar::GetToFTrkVar();      tof_track  = 0;
13        candeleteobj = 0;
14  };  };
15  //--------------------------------------  //--------------------------------------
16  //  //
# Line 19  PamTrack::PamTrack(){ Line 20  PamTrack::PamTrack(){
20   * Constructor   * Constructor
21   */   */
22  PamTrack::PamTrack(TrkTrack* t, CaloTrkVar* c, ToFTrkVar* o){  PamTrack::PamTrack(TrkTrack* t, CaloTrkVar* c, ToFTrkVar* o){
23      trk_track  = this->TrkTrack::GetTrkTrack();  
24      calo_track = this->CaloTrkVar::GetCaloTrkVar();      trk_track  = 0;
25      tof_track  = this->ToFTrkVar::GetToFTrkVar();      calo_track = 0;
26      if(t) *trk_track  = *t;      tof_track  = 0;
27      if(c) *calo_track = *c;  //     if(t)trk_track  = new TrkTrack(*t);
28      if(o) *tof_track  = *o;  //     if(c)calo_track = new CaloTrkVar(*c);
29    //     if(o)tof_track  = new ToFTrkVar(*o);
30        if(t)trk_track  = t;
31        if(c)calo_track = c;
32        if(o)tof_track  = o;
33        candeleteobj = 0;
34    
35  };  };
36    PamTrack::PamTrack(const PamTrack& track){
37    
38        TrkTrack   *t = track.trk_track;
39        CaloTrkVar *c = track.calo_track;
40        ToFTrkVar  *o = track.tof_track;
41    
42        trk_track  = 0;
43        calo_track = 0;
44        tof_track  = 0;
45        if(t)trk_track  = new TrkTrack(*t);
46        if(c)calo_track = new CaloTrkVar(*c);
47        if(o)tof_track  = new ToFTrkVar(*o);
48        candeleteobj = 1;
49        
50    }
51    void PamTrack::Clear(){
52    
53    //    cout << "PamTrack::Clear() "<<candeleteobj<<endl;
54        if(candeleteobj){
55            if(trk_track)  trk_track->TrkTrack::Clear();
56            if(calo_track) calo_track->CaloTrkVar::Clear();//???
57            if(tof_track)  tof_track->ToFTrkVar::Clear();//???
58        }else{
59            trk_track  = 0;
60            calo_track = 0;
61            tof_track  = 0;
62        }
63    }
64    void PamTrack::Delete(){
65    //    cout << "PamTrack::Delete() "<<candeleteobj<<endl;
66        if(candeleteobj){
67            if(trk_track)  {
68                trk_track->TrkTrack::Clear();
69                delete trk_track;
70            }
71            if(calo_track){
72                calo_track->CaloTrkVar::Clear();//???
73                delete calo_track;
74            }
75            if(tof_track){
76                tof_track->ToFTrkVar::Clear();//???
77                delete tof_track;
78            }
79        }else{
80            Clear();
81        }
82    }
83  //--------------------------------------  //--------------------------------------
84  //  //
85  //  //
# Line 35  PamTrack::PamTrack(TrkTrack* t, CaloTrkV Line 88  PamTrack::PamTrack(TrkTrack* t, CaloTrkV
88   * Constructor   * Constructor
89   */   */
90  PamLevel2::PamLevel2(){  PamLevel2::PamLevel2(){
91      trk_obj  = this->TrkLevel2::GetTrkLevel2();          
92      calo_obj = this->CaloLevel2::GetCaloLevel2();  //     trk2_obj  = TrkLevel2::GetTrkLevel2();
93      tof_obj  = this->ToFLevel2::GetToFLevel2();  //     trk1_obj  = TrkLevel1::GetTrkLevel1();
94      trig_obj = this->TrigLevel2::GetTrigLevel2();  //     trkh_obj  = TrkHough::GetTrkHough();
95      s4_obj   = this->S4Level2::GetS4Level2();  //     calo1_obj = CaloLevel1::GetCaloLevel1();
96      nd_obj   = this->NDLevel2::GetNDLevel2();  //     calo2_obj = CaloLevel2::GetCaloLevel2();
97      ac_obj   = this->AcLevel2::GetAcLevel2();  //     tof_obj   = ToFLevel2::GetToFLevel2();
98    //     trig_obj  = TrigLevel2::GetTrigLevel2();
99    //     s4_obj    = S4Level2::GetS4Level2();
100    //     nd_obj    = NDLevel2::GetNDLevel2();
101    //     ac_obj    = AcLevel2::GetAcLevel2();
102    //     orb_obj   = OrbitalInfo::GetOrbitalInfo();
103        
104        h0_obj    = 0;
105        trk0_obj  = 0;
106    
107        trk2_obj  = 0;
108        trk1_obj  = 0;
109        trkh_obj  = 0;
110        calo1_obj = 0;
111        calo2_obj = 0;
112        tof_obj   = 0;
113        trig_obj  = 0;
114        s4_obj    = 0;
115        nd_obj    = 0;
116        ac_obj    = 0;
117        orb_obj   = 0;
118    
119        run_obj   = 0;//new GL_RUN();
120        soft_obj   = 0;// Emiliano
121        irun = -1;
122        runfirstentry = 0ULL;
123        runlastentry = 0ULL;
124    
125        l0_file = NULL;
126        l0_tree = NULL;
127        iroot   = -1;
128        dbc     = 0;
129        
130        irun = -1;
131        run_tree = NULL;
132        run_tree_clone = NULL;
133        sel_tree = NULL;
134        sel_tree_clone = NULL;
135        
136        irunentry = -1;
137        pam_tree = NULL;
138        for(Int_t i=0; i<NCLONES; i++ )pam_tree_clone[i]=NULL;
139    
140        host = "mysql://localhost/pamelaprod";
141        user = "anonymous";
142        psw = "";
143        const char *pamdbhost=gSystem->Getenv("PAM_DBHOST");
144        const char *pamdbuser=gSystem->Getenv("PAM_DBUSER");
145        const char *pamdbpsw=gSystem->Getenv("PAM_DBPSW");
146        if ( !pamdbhost ) pamdbhost = "";
147        if ( !pamdbuser ) pamdbuser = "";
148        if ( !pamdbpsw ) pamdbpsw = "";
149        if ( strcmp(pamdbhost,"") ) host = pamdbhost;
150        if ( strcmp(pamdbuser,"") ) user = pamdbuser;
151        if ( strcmp(pamdbpsw,"") ) psw = pamdbpsw;
152    
153        
154    
155    //    sorted_tracks = 0;//new TRefArray();
156        
157        CAL0 = false;
158        CAL1 = true;
159        CAL2 = true;
160        TRK2 = true;
161        TRK1 = false;
162        TRKh = false;
163        TRKh = false;
164        TRG  = true;
165        TOF  = true;
166        TOF0 = false;
167        S4   = true;
168        ND   = true;
169        AC   = true;
170        ORB  = true;
171        
172        RUN  = true;
173    
174        SELLI = -1;
175    
176        tsorted=0;
177        timage=0;
178    
179    };
180    /**
181     * Delete the event (act as Dtor)
182     */
183    void PamLevel2::Delete(){
184            
185        if(run_obj)delete run_obj;
186        if(soft_obj)delete soft_obj; //Emiliano
187    
188    //    cout << "void PamLevel2::Clear()"<<endl;
189        if(h0_obj)   delete h0_obj;
190        if(trk0_obj) delete trk0_obj;      
191        if(trk1_obj) delete trk1_obj;      
192        if(trk2_obj) delete trk2_obj;
193        if(trkh_obj) delete trkh_obj;
194        if(calo1_obj)delete calo1_obj;
195        if(calo2_obj)delete calo2_obj;
196        if(tof_obj)  delete tof_obj;
197        if(trig_obj) delete trig_obj;
198        if(s4_obj)   delete s4_obj;
199        if(nd_obj)   delete nd_obj;
200        if(ac_obj)   delete ac_obj;
201        if(orb_obj)  delete orb_obj;
202        
203        if(tsorted){
204            tsorted->Delete();
205            delete tsorted;
206        }
207        if(timage){
208            timage->Delete();
209            delete timage;
210        }
211    
212        if(dbc){
213            dbc->Close();
214            delete dbc;
215        }
216        
217        if(l0_file)l0_file->Close();
218        if(pam_tree)pam_tree->Delete();;
219        if(run_tree)run_tree->Delete();;
220        if(sel_tree)sel_tree->Delete();;
221        for(Int_t i=0; i<NCLONES; i++ )if(pam_tree_clone[i])pam_tree_clone[i]->Delete();;
222        if(run_tree_clone)run_tree_clone->Delete();;
223        if(sel_tree_clone)sel_tree_clone->Delete();;
224        
225    
226    };
227    
228    /**
229     * Clear the event (NB! does not deallocate objects)
230     */
231    void PamLevel2::Clear(){
232            
233    //    cout << "void PamLevel2::Clear()"<<endl;
234    
235    //
236    // This method is called once for every entry but RunInfo and SoftInfo do not change until the next run so we cannot clear them here unless we don't
237    // want to load them for each event even if they are the same...
238    //
239    //    if(run_obj)delete run_obj;
240    //    if(run_obj) run_obj->Clear();  // Emiliano: Do not deallocate run_obj here, it will give segmentation fault! call clear instead
241    //    if(soft_obj) soft_obj->Clear();
242    
243        if(h0_obj)   h0_obj->Clear();      
244        if(trk0_obj) trk0_obj->Clear();    
245        if(trk1_obj) trk1_obj->Clear();    
246        if(trk2_obj) trk2_obj->Clear();
247        if(trkh_obj) trkh_obj->Clear();
248        if(calo1_obj)calo1_obj->Clear();
249        if(calo2_obj)calo2_obj->Clear();
250        if(tof_obj)  tof_obj->Clear();
251        if(trig_obj) trig_obj->Clear();
252        if(s4_obj)   s4_obj->Clear();
253        if(nd_obj)   nd_obj->Clear();
254        if(ac_obj)   ac_obj->Clear();
255        if(orb_obj)  orb_obj->Clear();
256        
257    //    if(sorted_tracks)sorted_tracks->Clear();
258    //    sorted_tracks.Clear();
259    
260        if(tsorted){
261            tsorted->Delete();
262        }
263        if(timage){
264            timage->Delete();
265        }
266        
267    };
268    
269    
270    //--------------------------------------
271    //
272    //
273    //--------------------------------------
274    void *PamLevel2::GetPointerTo(const char* c ){
275    
276        TString objname = c;
277    
278        if(!objname.CompareTo("TrkLevel1"))  {
279            if(!trk1_obj){
280                trk1_obj  = new TrkLevel1();
281                trk1_obj->Set();
282            }
283            return &trk1_obj;
284        };
285        if(!objname.CompareTo("TrkLevel2"))  {
286            if(!trk2_obj){  
287                trk2_obj  = new TrkLevel2();
288                trk2_obj->Set();
289            }
290            return &trk2_obj;
291        };
292        if(!objname.CompareTo("TrkHough"))   {
293            if(!trkh_obj)  trkh_obj  = new TrkHough();
294            return &trkh_obj;
295        };
296        if(!objname.CompareTo("CaloLevel1")) {
297            if(!calo1_obj) calo1_obj = new CaloLevel1();
298            return &calo1_obj;
299        };
300        if(!objname.CompareTo("CaloLevel2")) {
301            if(!calo2_obj){
302                calo2_obj = new CaloLevel2();
303                calo2_obj->Set();
304            };
305            return &calo2_obj;
306        };
307        if(!objname.CompareTo("ToFLevel2"))  {
308            if(!tof_obj){
309                tof_obj   = new ToFLevel2();
310                tof_obj->Set();
311            }
312            return &tof_obj;
313        };
314        if(!objname.CompareTo("TrigLevel2")) {
315            if(!trig_obj)  trig_obj  = new TrigLevel2();
316            return &trig_obj;
317        };
318        if(!objname.CompareTo("S4Level2"))   {
319            if(!s4_obj)    s4_obj    = new S4Level2();
320            return &s4_obj;
321        };
322        if(!objname.CompareTo("NDLevel2"))   {
323            if(!nd_obj)    nd_obj    = new NDLevel2();
324            return &nd_obj;
325        };
326        if(!objname.CompareTo("AcLevel2"))   {
327            if(!ac_obj)    ac_obj    = new AcLevel2();
328            return &ac_obj;
329        };
330        if(!objname.CompareTo("OrbitalInfo")){
331            if(!orb_obj)   orb_obj   = new OrbitalInfo();
332            return &orb_obj;
333        };
334        
335        if(!objname.CompareTo("RunInfo"))return &run_obj;
336    
337        if(!objname.CompareTo("SoftInfo"))return &soft_obj; // Emiliano
338    
339        return NULL;
340  };  };
341  //--------------------------------------  //--------------------------------------
342  //  //
343  //  //
344  //--------------------------------------  //--------------------------------------
345  /**  /**
346     * Retrieves the calorimeter track matching the seqno-th tracker stored track.
347     * (If seqno = -1 retrieves the self-trigger calorimeter track)
348     */
349     CaloTrkVar *PamLevel2::GetCaloStoredTrack(int seqno){
350        
351         if( !calo2_obj )return 0;
352    
353         if( calo2_obj->CaloLevel2::ntrk()==0 ){
354             cout << "PamLevel2::GetCaloStoredTrack(int) : requested tracker SeqNo "<< seqno <<" but no Calorimeter tracks are stored"<<endl;
355             return NULL;
356         };
357        
358         CaloTrkVar *c = 0;
359         Int_t it_calo=0;
360        
361         do{
362             c = calo2_obj->CaloLevel2::GetCaloTrkVar(it_calo);
363             it_calo++;
364         } while( c && seqno != c->trkseqno && it_calo < calo2_obj->CaloLevel2::ntrk());    
365        
366         if(!c || seqno != c->trkseqno){
367             c = 0;
368             if(seqno!=-1)cout << "PamLevel2::GetCaloStoredTrack(int) : requested tracker SeqNo "<< seqno <<" does not match Calorimeter stored tracks"<<endl;
369         };
370         return c;
371        
372     };
373    //--------------------------------------
374     //
375     //
376    //--------------------------------------
377    /**
378      * Retrieves the ToF track matching the seqno-th tracker stored track.
379      * (If seqno = -1 retrieves the tracker-independent tof track)
380     */
381     ToFTrkVar *PamLevel2::GetToFStoredTrack(int seqno){
382            
383         if( !tof_obj )return 0;
384    
385         if( tof_obj->ToFLevel2::ntrk()==0 ){
386             cout << "PamLevel2::GetToFStoredTrack(int) : requested tracker SeqNo "<< seqno <<" but no ToF tracks are stored"<<endl;
387             return NULL;
388         };
389        
390         ToFTrkVar *c = 0;
391         Int_t it_tof=0;
392        
393         do{
394             c = tof_obj->ToFLevel2::GetToFTrkVar(it_tof);
395             it_tof++;
396         } while( c && seqno != c->trkseqno && it_tof < tof_obj->ToFLevel2::ntrk());        
397        
398         if(!c || seqno != c->trkseqno){
399             c = 0;
400             if(seqno!=-1)cout << "PamLevel2::GetToFStoredTrack(int) : requested tracker SeqNo "<< seqno <<" does not match ToF stored tracks"<<endl;
401         };
402         return c;
403        
404     };
405    
406    //--------------------------------------
407     //
408     //
409    //--------------------------------------
410    /**
411     * Give the pamela track associated to a tracker track, retrieving related calorimeter and tof track information.
412     */
413     PamTrack* PamLevel2::GetPamTrackAlong(TrkTrack* t){
414        
415         cout <<"PamLevel2::GetPamTrackAlong(TrkTrack* t) **obsolete** "<<endl;
416         cout <<"(if you use it, remember to delete the PamTrack object)"<<endl;
417    
418         CaloTrkVar *c = 0;
419         ToFTrkVar  *o = 0;
420        
421         if(CAL2) c = GetCaloStoredTrack(t->GetSeqNo());
422         if(TOF) o = GetToFStoredTrack(t->GetSeqNo());
423        
424    //    if(t && c && o)track = new PamTrack(t,c,o);
425         PamTrack *track = new PamTrack(t,c,o);
426        
427         return track;
428    
429     };
430    //--------------------------------------
431    //
432    //
433    //--------------------------------------
434    /**
435   * Retrieves the it-th stored track.   * Retrieves the it-th stored track.
436   * It override TrkLevel2::GetTrack(int it).   * It override TrkLevel2::GetTrack(int it).
437   * @param itrk Track number, ranging from 0 to GetNTracks().   * @param itrk Track number, ranging from 0 to GetNTracks().
# Line 55  PamLevel2::PamLevel2(){ Line 439  PamLevel2::PamLevel2(){
439    
440  PamTrack* PamLevel2::GetStoredTrack(Int_t itrk){  PamTrack* PamLevel2::GetStoredTrack(Int_t itrk){
441            
442      // retrieve itrk-th tracker stored track      cout <<"PamLevel2::GetStoredTrack(Int_t itrk) **to-be-updated** "<<endl;
443      TrkTrack   *t = 0;      cout <<"for the moment, better use separately the methods: TrkLevel2::GetStoredTrack(seqno) CaloLevel2::GetCaloTrkVar(Int_t notrack) ToFLevel2::GetToFTrkVar(Int_t notrack)"<<endl;
444      CaloTrkVar *c = 0;      cout <<"(if you use it, remember to delete the PamTrack object)"<<endl;
445      ToFTrkVar  *o = 0;      PamTrack *track = 0;
446        
447      if( itrk >=0 && itrk < TrkLevel2::ntrk() ){      if( itrk >=0 && itrk < trk2_obj->TrkLevel2::ntrk() ){
448          t = TrkLevel2::GetStoredTrack(itrk);              
449          c = CaloLevel2::GetCaloTrkVar(t->GetSeqNo());          TrkTrack *t = trk2_obj->TrkLevel2::GetStoredTrack(itrk);
450          o = ToFLevel2::GetToFTrkVar(t->GetSeqNo());          track = GetPamTrackAlong(t);
451            
452            
453    
454        }else{
455            cout << "PamLevel2::GetStoredTrack(int) : tracker track SeqNo "<< itrk <<" does not exist (GetNTracks() = "<<trk2_obj->TrkLevel2::GetNTracks()<<")"<<endl;
456      };      };
     //  retrieve related ToF-track  
457            
     // hence create a "PamTrack" object  
     PamTrack *track = 0;  
     if(t && c && o)track = new PamTrack(t,c,o);  
458      return track;      return track;
459            
460  }  }
# Line 78  PamTrack* PamLevel2::GetStoredTrack(Int_ Line 463  PamTrack* PamLevel2::GetStoredTrack(Int_
463  //  //
464  //--------------------------------------  //--------------------------------------
465  /**  /**
466   * Sort physical (tracker) tracks and stores them in a TObjectArray (of TrkTrack objects).   * Sort physical (tracker) tracks and stores them in the TRefArray (of TrkTrack objects) which pointer is  PamLevel2::sorted_tracks.
467   * The total number of physical tracks is given by GetNTracks() and the it-th physical track can be retrieved by means of the method GetTrack(int it).   * @param how String to set the sorting cryterium (es: "CAL" or "TRK+CAL+TOF" ecc...).
468   * This method overrides TrkLevel2::GetTracks(), where sorting is done by decreasing number of fit points and increasing chi^2.   * Sorting cryteria:
469   * PamLevel2::GetTracks() keeps the same track order given by TrkLevel2::GetTracks(), but checks image selection by using calorimeter and ToF tracking information.   * TRK: lower chi**2
470     * CAL: lower Y spatial residual on the first calorimeter plane
471     * TOF: bigger numebr of hit PMTs along the track, on S12 S21 S32 (where paddles are along the Y axis).
472     * The default sorting cryterium is "TOF+CAL".
473     *
474     * The total number of physical tracks is always given by GetNTracks() and the it-th physical track can be retrieved by means of the methods GetTrack(int it) and GetTrack(int it, TString how).
475   */   */
476  TClonesArray *PamLevel2::GetTracks(){  void PamLevel2::SortTracks(TString how){
477    
478      // define new array for sorted tracker tracks  //    cout <<" PamLevel2::SortTracks(TString how) "<<endl;
479      TClonesArray *aa = new TClonesArray("TrkTrack");      if( !trk2_obj ){
480      TClonesArray &sorted = *aa;          cout << "void PamLevel2::SortTracks(TString how):  TrkLevel2 not loaded !!!";
481            return;
482        };
483    //    cout << "call SortTracs() "<<endl;
484      //Save current Object count
485        Int_t ObjectNumber = TProcessID::GetObjectCount();
486    
487    //    cout << "ObjectNumber  "<<ObjectNumber <<endl;
488    
489    //     if(!sorted_tracks)sorted_tracks = new TRefArray();
490    //     sorted_tracks->Clear();
491    //    sorted_tracks.Clear();
492    
493        if(!tsorted)tsorted = new TClonesArray("PamTrack",trk2_obj->GetNTracks());
494        tsorted->Delete();
495        TClonesArray &ttsorted = *tsorted;
496        if(!timage)timage = new TClonesArray("PamTrack",trk2_obj->GetNTracks());
497        timage->Delete();
498        TClonesArray &ttimage = *timage;
499    
     // loop over the tracks sorted by the tracker  
     for(Int_t i=0; i < TrkLevel2::GetNTracks(); i++){  
500    
501          TrkTrack *ts=0;      // loop over the tracks sorted by the tracker
502        Bool_t use_TRK = how.Contains("TRK", TString::kIgnoreCase);
503        Bool_t use_CAL = how.Contains("CAL", TString::kIgnoreCase);
504        Bool_t use_TOF = how.Contains("TOF", TString::kIgnoreCase);
505        
506        if( !CAL2 &&  use_CAL) use_CAL = false;
507        if( !TOF &&  use_TOF) use_TOF = false;
508        
509        if( !TRK2 ){
510    //      cout << "SortTracks() : without tracker does not work!!! (not yet)" << endl;
511            return;
512        };
513    
514        //   cout << "use_CAL "<<use_CAL<<" use_TOF "<<use_TOF<<" use_TRK "<<use_TRK <<endl;
515        
516        for(Int_t i=0; i < trk2_obj->TrkLevel2::GetNTracks(); i++){
517            
518            TrkTrack   *ts = 0;
519            CaloTrkVar *cs = 0;
520            ToFTrkVar  *os = 0;
521            
522          // get tracker tracks          // get tracker tracks
523          TrkTrack   *tp = TrkLevel2::GetTrack(i);                    //tracker          TrkTrack   *tp = trk2_obj->TrkLevel2::GetTrack(i);                    //tracker
524          CaloTrkVar *cp = CaloLevel2::GetCaloTrkVar(tp->GetSeqNo()); //calorimeter          CaloTrkVar *cp = GetCaloStoredTrack(tp->GetSeqNo());
525          ToFTrkVar  *op = ToFLevel2::GetToFTrkVar(tp->GetSeqNo());   //tof          ToFTrkVar  *op = GetToFStoredTrack(tp->GetSeqNo());
526    
527            TrkTrack   *ti = 0;              //tracker (image)
528            CaloTrkVar *ci = 0;
529            ToFTrkVar  *oi = 0;
530    //      cout << "trk track n. "<<i << " "<<hex<< tp <<dec<< endl;
531          // if track has an image, check image selection          // if track has an image, check image selection
532          if(tp->HasImage()){          if(tp->HasImage()){
533              TrkTrack   *ti = TrkLevel2::GetTrackImage(i);              //tracker (image)              
534              CaloTrkVar *ci = CaloLevel2::GetCaloTrkVar(ti->GetSeqNo());//calorimeter (image)              ti = trk2_obj->TrkLevel2::GetTrackImage(i);              //tracker (image)
535              ToFTrkVar  *oi = ToFLevel2::GetToFTrkVar(ti->GetSeqNo());  //tof (image)              ci = GetCaloStoredTrack(ti->GetSeqNo());
536                oi = GetToFStoredTrack(ti->GetSeqNo());
537                
538    //          cout << "its image "<<i << " "<<hex<< ti <<dec<< endl;
539    
540              //assign starting scores              //assign starting scores
541              Int_t tp_score = 1;              Int_t tp_score = 0;  //main track sorted by the tracker
542              Int_t ti_score = 0;              Int_t ti_score = 0;  //image track
543                
544              // ------------------------              // ------------------------
545              // calorimeter check              // calorimeter check
546              // ------------------------              // ------------------------
547                // check the Y spatial residual on the first calorimeter plane
548                // (cut on calorimeter variables from Emiliano)
549                if( use_CAL && !calo2_obj ){
550                    cout << "void PamLevel2::SortTracks(TString how): how= "<<how<<" but CaloLevel2 not loaded !!!";
551                    return;
552                };
553              if(              if(
554                        npcfit[1] > 3   &&  //no. of fit planes on Y view                  use_CAL            &&
555  //              varcfit[1] < 50.&&  //fit variance on Y view                  calo2_obj->npcfit[1] > 15     &&   //no. of fit planes on Y view
556                        true){                  calo2_obj->varcfit[1] < 1000. &&  //fit variance on Y view
557                    true){
558                  Float_t resy_p = cp->tbar[0][1] - cbar[0][1];if(resy_p < 0)resy_p= - resy_p;  
559                  Float_t resy_i = ci->tbar[0][1] - cbar[0][1];if(resy_i < 0)resy_i= - resy_i;                  
560                    Float_t resy_p = cp->tbar[0][1] - calo2_obj->cbar[0][1]; if(resy_p < 0)resy_p= - resy_p;
561                    Float_t resy_i = ci->tbar[0][1] - calo2_obj->cbar[0][1]; if(resy_i < 0)resy_i= - resy_i;
562                    
563                  if(resy_p <= resy_i) tp_score++;                  if(resy_p <= resy_i) tp_score++;
564                  else                 ti_score++;                  else                 ti_score++;
565                        };  
566    //              cout << "CALO "<<tp_score<<ti_score<<endl;
567    
568                };
569              // ------------------------              // ------------------------
570              // TOF check              // TOF check
571              // ------------------------                  // ------------------------    
572                // check the number of hit pmts along the track
573                // on S12 S21 and S32, where paddles are parallel to Y axis
574                if( use_TOF && !tof_obj ){
575                    cout << "void PamLevel2::SortTracks(TString how): how= "<<how<<" but ToFLevel2 not loaded !!!";
576                    return;
577                };
578                if( use_TOF ){
579                    
580                    Int_t nphit_p =0;
581                    Int_t nphit_i =0;
582                    
583                    
584    /*                              cout << "track: npmtadc "<< op->npmtadc << endl;
585                                    cout << "track: npmttdc "<< op->npmttdc << endl;
586                                    cout << "image: npmtadc "<< oi->npmtadc << endl;
587                                    cout << "image: npmttdc "<< oi->npmttdc << endl;*/
588                    
589                    for (Int_t ih=0; ih < op->npmtadc; ih++){
590                        Int_t pl = tof_obj->GetPlaneIndex( (op->pmtadc).At(ih) );
591                        if(pl == 1 || pl == 2 || pl == 5)nphit_p++;
592                    };
593                    
594                    for (Int_t ih=0; ih < oi->npmtadc; ih++){
595                        Int_t pl = tof_obj->GetPlaneIndex( (oi->pmtadc).At(ih) );
596                        if(pl == 1 || pl == 2 || pl == 5)nphit_i++;
597                    };
598                    
599                    if(
600                        use_TOF            &&
601                        (nphit_p+nphit_i) !=0 &&    
602                        true){
603                        
604                        if( nphit_p >= nphit_i) tp_score++;
605                        else ti_score++;
606                    };
607    //              cout << "TOF "<<tp_score<<ti_score<<endl;
608                };
609                if(tp_score == ti_score) use_TRK = true;
610                // ------------------------
611                // tracker check
612                // ------------------------
613                // chi**2 difference is not always large enough to distinguish among
614                // the real track and its image.
615                // Tracker check will be applied always when calorimeter and tof information is ambiguous.
616                if(use_TRK){
617                    if(      tp->chi2 > 0 && tp->chi2 < ti->chi2 ) tp_score++ ;
618                    else if( ti->chi2 > 0 && ti->chi2 < tp->chi2 ) ti_score++ ;
619    //              cout << "TRK "<<tp_score<<ti_score<<endl;
620                };
621                
622              // ------------------------              // ------------------------
623              // the winner is....              // the winner is....
624              // ------------------------                  // ------------------------    
625                        if(tp_score > ti_score) ts = tp;//the track sorted by the tracker!!              if      (tp_score > ti_score) {
626                        else                    ts = ti;//its image!!  //              ts = tp;//the track sorted by the tracker!!
627    //              cs = cp;
628    //              os = op;
629                }else if (tp_score < ti_score) {
630                    ts = ti;//its image!!
631                    cs = ci;
632                    os = oi;
633    
634                    ti = tp;//its image!!
635                    ci = cp;
636                    oi = op;
637    
638                    tp = ts;//its image!!
639                    cp = cs;
640                    op = os;
641    
642                    
643                }else {
644    //              ts = tp;
645    //              cs = cp;
646    //              os = op;
647    //                              cout << "Warning - track image ambiguity not solved" << endl;
648    //                              cout << ts->GetNtot() << " "<< ts->chi2 << " " << npcfit[1] << " "<< nphit_p << endl;
649                };
650                
651          }else{          }else{
652              ts = tp;  //          ts = tp;
653    //          cs = cp;
654    //          os = op;
655          };          };
656                    
657          new(sorted[i]) TrkTrack(*ts); //save the track in the sorted array  //      cout <<" SortTracks() "<<i<<" -- "<<ts<<endl;
658    //      sorted_tracks->Add(ts);//save the track in the sorted array
659    //      sorted_tracks.Add(ts);//save the track in the sorted array
660    //      sorted_tracks.Add(tp);//save the track in the sorted array
661    //      cout << "SortTracks:: sorted_tracks->Add(it) "<<i<<" "<<ts<<endl;
662    //      cout<<"o "<<tp<<endl;
663    //      cout<<"o "<<cp<<endl;
664    //      cout<<"o "<<op<<endl;
665            new(ttsorted[i]) PamTrack(tp,cp,op);
666            new(ttimage[i])  PamTrack(ti,ci,oi);
667      };      };
668    
669      return aa;      if( tsorted->GetEntries() != trk2_obj->GetNTracks() ){
670            cout << "void PamLevel2::SortTracks(TString how): tsorted->GetEntries() "<<tsorted->GetEntries()<<" != trk2_obj->GetNTracks() = "<<trk2_obj->GetNTracks() <<endl;
671            tsorted->Delete(); tsorted=0;
672            timage->Delete(); timage=0;    
673        }
674    
675        //Restore Object count
676        //To save space in the table keeping track of all referenced objects
677        //We reset the object count to what it was at the beginning of the event.
678        TProcessID::SetObjectCount(ObjectNumber);
679        
680  };  };
681  //--------------------------------------  //--------------------------------------
682  //  //
683  //  //
684  //--------------------------------------  //--------------------------------------
685  /**  /**
686     * This method overrides TrkLevel2::GetTracks(), where sorting is done by decreasing number of fit points and increasing chi^2.
687     * PamLevel2::GetTracks() keeps the same track order given by TrkLevel2::GetTracks(), but checks image selection by using calorimeter and ToF tracking information.
688     */
689    // TRefArray *PamLevel2::GetTracks(){
690    
691    // //  *-*-*-*-*-*-*-*-*-*-*-*-*
692    //     SortTracks("+CAL+TOF");
693    // //  *-*-*-*-*-*-*-*-*-*-*-*-*
694    
695    // //   return  sorted_tracks;
696    //     return &sorted_tracks;
697        
698    //  };
699    TClonesArray *PamLevel2::GetTracks(){
700    
701    //  *-*-*-*-*-*-*-*-*-*-*-*-*
702        SortTracks("+CAL+TOF");
703    //  *-*-*-*-*-*-*-*-*-*-*-*-*
704    
705        return tsorted;
706        
707     };
708    //--------------------------------------
709     //
710     //
711    //--------------------------------------
712    /**
713   * Retrieves the it-th Pamela "physical" track.   * Retrieves the it-th Pamela "physical" track.
714   * It override TrkLevel2::GetTrack(int it).   * It override TrkLevel2::GetTrack(int it).
715   * @param it Track number, ranging from 0 to GetNTracks().   * @param it Track number, ranging from 0 to GetNTracks().
716   */   */
717  PamTrack *PamLevel2::GetTrack(int it){  PamTrack *PamLevel2::GetTrack(int it){
718    
719      TClonesArray *aa = this->GetTracks();  //    if(!trk2_obj) return 0;
720      TClonesArray &sorted = *aa;          
721    // //  *-*-*-*-*-*-*-*-*-*-*-*-*
722    //     SortTracks("+CAL+TOF");
723    // //  *-*-*-*-*-*-*-*-*-*-*-*-*
724    // //    if(!sorted_tracks)return 0;
725    //     if(sorted_tracks.IsEmpty())return 0;
726    
727    //     PamTrack *track = 0;
728        
729    //     if( it >=0 && it < trk2_obj->TrkLevel2::GetNTracks() && it<sorted_tracks.GetEntriesFast() ){    
730    //      TrkTrack   *t = (TrkTrack*)sorted_tracks.At(it);
731    //      track = GetPamTrackAlong(t);
732    //     }else{
733    //      cout << "PamLevel2::GetTrack(int) : tracker track SeqNo "<< it <<" does not exist (GetNTracks() = "<<trk2_obj->TrkLevel2::GetNTracks()<<")"<<endl;
734    //     };
735        
736    //     return track;
737    
738      TrkTrack   *t = 0;  //    cout << "PamLevel2::GetTrack(int it) "<<endl;
739      CaloTrkVar *c = 0;  //  *-*-*-*-*-*-*-*-*-*-*-*-*
740      ToFTrkVar  *o = 0;      SortTracks("+CAL+TOF");
741    //  *-*-*-*-*-*-*-*-*-*-*-*-*
742        if(!tsorted)return 0;
743        if(!tsorted->GetEntries())return 0;
744    
745      if( it >=0 && it < TrkLevel2::GetNTracks() ){      PamTrack *track = 0;
746          t = (TrkTrack*)sorted[it];      
747          c = CaloLevel2::GetCaloTrkVar(t->GetSeqNo());      if( it >=0 && it < trk2_obj->TrkLevel2::GetNTracks()){
748          o = ToFLevel2::GetToFTrkVar(t->GetSeqNo());  //      TrkTrack   *t = (TrkTrack*)sorted_tracks.At(it);
749    //      track = GetPamTrackAlong(t);
750            TClonesArray &t = *(tsorted);
751            track = (PamTrack*)t[it];
752            
753        }else{
754            cout << "PamLevel2::GetTrack(int) : tracker track SeqNo "<< it <<" does not exist (GetNTracks() = "<<trk2_obj->TrkLevel2::GetNTracks()<<")"<<endl;
755      };      };
756            
     // hence create a "PamTrack" object  
     PamTrack *track = 0;  
     if(t && c && o)track = new PamTrack(t,c,o);  
757      return track;      return track;
758        
759  };  };
760    
761  //--------------------------------------  //--------------------------------------
762  //  //
763  //  //
764  //--------------------------------------  //--------------------------------------
765  /**  /**
766   * Retrieves (if present) the image of the it-th Pamela "physical" track, sorted by the method PamLevel2::GetTracks().   * Retrieves (if present) the image of the it-th Pamela "physical" track, sorted by the method PamLevel2::SortTracks().
767   * @param it Track number, ranging from 0 to GetNTracks().   * @param it Track number, ranging from 0 to GetNTracks().
768   */   */
769  PamTrack *PamLevel2::GetTrackImage(int it){  PamTrack *PamLevel2::GetTrackImage(int it){
770    
771      TClonesArray *aa = this->GetTracks();  //     if(!trk2_obj) return 0;
772      TClonesArray &sorted = *aa;  
773    // //  *-*-*-*-*-*-*-*-*-*-*-*-*
774    //     SortTracks("+CAL+TOF");
775    // //  *-*-*-*-*-*-*-*-*-*-*-*-*
776    // //    if(!sorted_tracks)return 0;
777    //     if(sorted_tracks.IsEmpty())return 0;
778        
779    //     PamTrack *image = 0;
780        
781    //     if( it >=0 && it < trk2_obj->TrkLevel2::GetNTracks() ){
782    //      TrkTrack *temp = (TrkTrack*)sorted_tracks.At(it);
783    //      if( temp->HasImage() ){
784    //          TrkTrack   *t = trk2_obj->TrkLevel2::GetStoredTrack(temp->GetImageSeqNo());
785    //          image = GetPamTrackAlong(t);
786    //      }else{
787    //          cout <<"PamLevel2::GetTrackImage(int) : Track SeqNo "<<it<<" does not have image"<<endl;
788    //      };
789    //     }else{
790    //      cout << "PamLevel2::GetTrackImage(int) : Tracker track SeqNo "<< it <<" does not exist (GetNTracks() = "<<trk2_obj->TrkLevel2::GetNTracks()<<")"<<endl;
791    //     };
792        
793    //     return image;
794    
     TrkTrack   *t = 0;  
     CaloTrkVar *c = 0;  
     ToFTrkVar  *o = 0;  
795    
796      if( it >=0 && it < TrkLevel2::GetNTracks() ){  //  *-*-*-*-*-*-*-*-*-*-*-*-*
797          TrkTrack *temp = (TrkTrack*)sorted[it];      SortTracks("+CAL+TOF");
798          if( temp->HasImage() ){  //  *-*-*-*-*-*-*-*-*-*-*-*-*
799              t = TrkLevel2::GetStoredTrack(temp->GetImageSeqNo());      if(!timage)return 0;
800              c = CaloLevel2::GetCaloTrkVar(temp->GetImageSeqNo());      if(!timage->GetEntries())return 0;
801              o = ToFLevel2::GetToFTrkVar(temp->GetImageSeqNo());      
802        PamTrack *image = 0;
803        
804        if( it >=0 && it < trk2_obj->TrkLevel2::GetNTracks() ){
805            TClonesArray &t = *(tsorted);
806            PamTrack *temp = (PamTrack*)t[it];
807            if( temp->GetTrkTrack()->HasImage() ){
808                TClonesArray &t = *(timage);
809                image = (PamTrack*)t[it];
810            }else{
811    //          cout <<"PamLevel2::GetTrackImage(int) : Track SeqNo "<<it<<" does not have image"<<endl;
812          };          };
813        }else{
814            cout << "PamLevel2::GetTrackImage(int) : Tracker track SeqNo "<< it <<" does not exist (GetNTracks() = "<<trk2_obj->TrkLevel2::GetNTracks()<<")"<<endl;
815      };      };
816            
     // hence create a "PamTrack" object  
     PamTrack *image = 0;  
     if(t && c && o)image = new PamTrack(t,c,o);  
817      return image;      return image;
       
818  }  }
819    
820  //--------------------------------------  //--------------------------------------
# Line 209  PamTrack *PamLevel2::GetTrackImage(int i Line 822  PamTrack *PamLevel2::GetTrackImage(int i
822  //  //
823  //--------------------------------------  //--------------------------------------
824  /**  /**
825   * Get the Pamela detector trees and make them friends.   * Get the Pamela detector trees in a single file and make them friends.
826     * @param f TFile pointer
827     * @param detlist String to select trees to be included
828     * @return Pointer to a TTree
829   */   */
830  TTree *PamLevel2::LoadPamTrees(TFile *f){  TTree *PamLevel2::GetPamTree(TFile *f, TString detlist ){
831        
832      TTree *Tout =0;  //     if( !detlist.IsNull() ) SetWhichTrees(detlist);
833    //     else                    GetWhichTrees(f);
834            
835      // Tracker      cout << "TTree *PamLevel2::GetPamTree(TFile *f, TString detlist ) -- obsolte "<<endl;
836    
837        SetWhichTrees(detlist);
838    
839        TTree *Trout =0;
840    
841        TString fname = f->GetName();
842        if(!CheckLevel2File(fname))return NULL;
843    
844    //    UInt_t *found=0;    
845    
846        cout<< "GetPamTree(TFile*,TString): detector list --> ";
847        if(TRK1)cout<<"TRK1 ";
848        if(TRK2)cout<<"TRK2 ";
849        if(TRKh)cout<<"TRKH ";
850        if(CAL1)cout<<"CAL1 ";
851        if(CAL2)cout<<"CAL2 ";
852        if(TOF)cout<<"TOF ";
853        if(TRG)cout<<"TRG ";
854        if(AC)cout<<"AC ";
855        if(ND)cout<<"ND ";
856        if(S4)cout<<"S4 ";
857        if(ORB)cout<<"ORB ";
858        cout << endl;
859        if(SELLI)cout<<">>> Found selection-list <<<"<<endl;
860    
861        f->cd();
862    
863    // Tracker
864      TTree *T = (TTree*)f->Get("Tracker");      TTree *T = (TTree*)f->Get("Tracker");
865      if(T) {      if(T && (TRK2||TRK1||TRKh)) {
866          T->SetBranchAddress("TrkLevel2", GetPointerToTrk());          if(TRK2)T->SetBranchAddress("TrkLevel2", GetPointerTo("TrkLevel2"));
867          cout << "Tracker      : set branch address TrkLevel2"<<endl;  //      else    T->SetBranchStatus("TrkLevel2",0,found);
868          if(!Tout)Tout=T;          if(TRK2)cout << "Tracker      : set branch address TrkLevel2"<<endl;
869            if(TRK1)T->SetBranchAddress("TrkLevel1", GetPointerTo("TrkLevel1"));
870    //      else    T->SetBranchStatus("TrkLevel1",0,found);
871            if(TRK1)cout << "Tracker      : set branch address TrkLevel1"<<endl;
872            if(TRKh)T->SetBranchAddress("TrkHough", GetPointerTo("TrkHough"));
873    //      else    T->SetBranchStatus("TrkHough",0,found);
874            if(TRKh)cout << "Tracker      : set branch address TrkHough"<<endl;
875            if(!Trout)Trout=T;
876            else Trout->AddFriend(T);
877      }else{      }else{
878          cout << "Tracker      : missing tree"<<endl;          cout << "Tracker      : missing tree"<<endl;
879      };      };
880      // Calorimeter      // Calorimeter
881      TTree *C = (TTree*)f->Get("Calorimeter");      TTree *C = (TTree*)f->Get("Calorimeter");
882      if(C) {      if(C && (CAL2||CAL1)) {
883          C->SetBranchAddress("CaloLevel2", GetPointerToCalo());          if(CAL2)C->SetBranchAddress("CaloLevel2", GetPointerTo("CaloLevel2"));
884          cout << "Calorimeter  : set branch address CaloLevel2"<<endl;  //      else    C->SetBranchStatus("CaloLevel2",0,found);
885          if(!Tout)Tout=C;          if(CAL2)cout << "Calorimeter  : set branch address CaloLevel2"<<endl;
886          else Tout->AddFriend(C);          if(CAL1)C->SetBranchAddress("CaloLevel1", GetPointerTo("CaloLevel1"));
887    //      else    C->SetBranchStatus("CaloLevel1",0,found);
888            if(CAL1)cout << "Calorimeter  : set branch address CaloLevel1"<<endl;
889            if(!Trout)Trout=C;
890            else Trout->AddFriend(C);
891      }else{      }else{
892          cout << "Calorimeter  : missing tree"<<endl;          cout << "Calorimeter  : missing tree"<<endl;
893      };      };
894    
895      // ToF          // ToF    
896      TTree *O = (TTree*)f->Get("ToF");      TTree *O = (TTree*)f->Get("ToF");
897      if(O) {      if(O && TOF) {
898          O->SetBranchAddress("ToFLevel2", GetPointerToToF());          O->SetBranchAddress("ToFLevel2", GetPointerTo("ToFLevel2"));
899          cout << "ToF          : set branch address ToFLevel2"<<endl;          cout << "ToF          : set branch address ToFLevel2"<<endl;
900          if(!Tout)Tout=O;          if(!Trout)Trout=O;
901          else Tout->AddFriend(O);          else Trout->AddFriend(O);
902      }else{      }else{
903          cout << "ToF         : missing tree"<<endl;          cout << "ToF         : missing tree"<<endl;
904      };      };
905      // Trigger      // Trigger
906      TTree *R = (TTree*)f->Get("Trigger");      TTree *R = (TTree*)f->Get("Trigger");
907      if(R) {      if(R && TRG) {
908          R->SetBranchAddress("TrigLevel2", GetPointerToTrig());          R->SetBranchAddress("TrigLevel2", GetPointerTo("TrigLevel2"));
909          cout << "Trigger      : set branch address TrigLevel2"<<endl;          cout << "Trigger      : set branch address TrigLevel2"<<endl;
910          if(!Tout)Tout=O;          if(!Trout)Trout=O;
911          else Tout->AddFriend(R);          else Trout->AddFriend(R);
912      }else{      }else{
913          cout << "Trigger      : missing tree"<<endl;          cout << "Trigger      : missing tree"<<endl;
914      };      };
915      // S4      // S4
916      TTree *S = (TTree*)f->Get("S4");      TTree *S = (TTree*)f->Get("S4");
917      if(S) {      if(S && S4) {
918          S->SetBranchAddress("S4Level2", GetPointerToS4());          S->SetBranchAddress("S4Level2", GetPointerTo("S4Level2"));
919          cout << "S4           : set branch address S4Level2"<<endl;          cout << "S4           : set branch address S4Level2"<<endl;
920          if(!Tout)Tout=O;          if(!Trout)Trout=O;
921          else Tout->AddFriend(S);          else Trout->AddFriend(S);
922      }else{      }else{
923          cout << "S4           : missing tree"<<endl;          cout << "S4           : missing tree"<<endl;
924      };      };
925      // Neutron Detector      // Neutron Detector
926      TTree *N = (TTree*)f->Get("NeutronD");      TTree *N = (TTree*)f->Get("NeutronD");
927      if(N) {      if(N && ND) {
928          N->SetBranchAddress("NDLevel2", GetPointerToND());          N->SetBranchAddress("NDLevel2", GetPointerTo("NDLevel2"));
929          cout << "NeutronD     : set branch address NDLevel2"<<endl;          cout << "NeutronD     : set branch address NDLevel2"<<endl;
930          if(!Tout)Tout=O;          if(!Trout)Trout=O;
931          else Tout->AddFriend(N);          else Trout->AddFriend(N);
932      }else{      }else{
933          cout << "NeutronD     : missing tree"<<endl;          cout << "NeutronD     : missing tree"<<endl;
934      };      };
935      // Anticounters      // Anticounters
936      TTree *A = (TTree*)f->Get("Anticounter");      TTree *A = (TTree*)f->Get("Anticounter");
937      if(A) {      if(A && AC) {
938          A->SetBranchAddress("AcLevel2", GetPointerToAc());          A->SetBranchAddress("AcLevel2", GetPointerTo("AcLevel2"));
939            cout << "Anticounter  : set branch address AcLevel2"<<endl;
940            if(!Trout)Trout=O;
941            else Trout->AddFriend(A);
942        }else{
943            cout << "Anticounter  : missing tree"<<endl;
944        };
945        // Orbital Info
946        TTree *B = (TTree*)f->Get("OrbitalInfo");
947        if(B && ORB) {
948            B->SetBranchAddress("OrbitalInfo", GetPointerTo("OrbitalInfo"));
949            cout << "OrbitalInfo  : set branch address OrbitalInfo"<<endl;
950            if(!Trout)Trout=O;
951            else Trout->AddFriend(B);
952        }else{
953            cout << "OrbitalInfo  : missing tree"<<endl;
954        };
955    
956        TTree *L = (TTree*)f->Get("SelectionList");
957        if(L && SELLI==1) {
958    //      L->SetBranchAddress("RunEntry",&irun);
959    //      cout << "SelectionList: set branch address RunEntry"<<endl;
960    //      L->SetBranchAddress("EventEntry",&irunentry);
961    //      cout << "SelectionList: set branch address EventEntry"<<endl;
962    //      if(!Trout)Trout=O;
963    //      else Trout->AddFriend("SelectionList");
964            cout << " TTree *PamLevel2::GetPamTree(TFile, TString) >>> SelectionList not implemente!!!!"<<endl;
965            sel_tree = 0;
966        }else{
967            cout << "SelectionList  : missing tree"<<endl;
968        };
969        
970        cout<<endl<<" Number of entries: "<<Trout->GetEntries()<<endl<<endl;
971        
972        return Trout;
973        
974    }
975    //--------------------------------------
976    //
977    //
978    //--------------------------------------
979    /**
980     * Get list of Level2 files.
981     * @param ddir Level2 data directory.
982     * @param flisttxt Name of txt file containing file list.
983     * @return Pointer to a TList of TSystemFiles
984     * If no input file list is given , all the Level2 files inside the directory are processed.
985     */
986    TList*  PamLevel2::GetListOfLevel2Files(TString ddir, TString flisttxt = ""){
987            
988        TString wdir = gSystem->WorkingDirectory();
989        
990        if(ddir=="")ddir = wdir;
991    //      TSystemDirectory *datadir = new TSystemDirectory(gSystem->BaseName(ddir),ddir);
992        cout << "Level2 data directory : "<<  ddir << endl;
993        
994        TList *contents  = new TList; // create output list
995        contents->SetOwner();
996        
997    //    char *fullpath;
998    //    const char *fullpath;
999        
1000        // if no input file list is given:  
1001        if ( flisttxt != "" ){
1002            
1003    //      if( !gSystem->IsFileInIncludePath(flisttxt,&fullpath) ){        
1004    //      if( !(fullpath = gSystem->FindFile("./",flisttxt)) ){
1005    //          cout <<"File "<<flisttxt<<" not found"<<endl;
1006    //          return 0;
1007    //      }      
1008    //      flisttxt = fullpath;
1009    
1010            flisttxt = gSystem->ConcatFileName(gSystem->DirName(flisttxt),gSystem->BaseName(flisttxt));
1011    
1012            if( !gSystem->ChangeDirectory(ddir) ){
1013                cout << "Cannot change directory : "<<ddir<<endl;
1014                return 0;
1015            }
1016            
1017            cout <<"Input file list : " << flisttxt <<endl;
1018            ifstream in;
1019            in.open(flisttxt, ios::in); //open input file list
1020            if(!in.good()){
1021                cout <<" ERROR opening the file "<<endl;
1022                gSystem->ChangeDirectory(wdir); // back to the working directory
1023                return 0;
1024            }      
1025            int line=0;
1026            while (1) {
1027                TString file;
1028                in >> file;
1029                if (!in.good()) break;
1030                line++;
1031    //          cout <<"(1) " << file << endl;
1032                if(file.IsNull()){
1033                    cout << "-- list interrupted at line "<<line <<endl;
1034                    break;
1035                }
1036                if(file.Contains("#"))file = file(0,file.First("#"));
1037    //          cout <<"(2) " << file << endl;
1038    //          if( gSystem->IsFileInIncludePath(file,&fullpath) ){
1039    //          if( (fullpath = gSystem->FindFile(ddir,file)) ){
1040                if( file.EndsWith(".root") ){
1041                    char *fullpath = gSystem->ConcatFileName(gSystem->DirName(ddir),gSystem->BaseName(file));
1042                    contents->Add(new TSystemFile(fullpath,gSystem->DirName(fullpath)));// add file to the list
1043                    delete fullpath;
1044                }
1045    //          }else{
1046    //              if(file.Data()!="")cout << "File: "<<file<<" ---> missing "<< endl;
1047    //          };
1048            };
1049            in.close();
1050            
1051        }else{
1052            
1053            cout << "No input file list given."<<endl;
1054            cout << "Check for existing root files."<<endl;
1055    //              cout << "Warking directory: "<< gSystem->WorkingDirectory()<< endl;
1056            
1057            TSystemDirectory *datadir = new TSystemDirectory(gSystem->BaseName(ddir),ddir);
1058            TList *temp = datadir->GetListOfFiles();
1059    //              temp->Print();
1060    //              cout << "*************************************" << endl;
1061            
1062            TIter next(temp);
1063            TSystemFile *questo = 0;
1064            
1065            
1066            while ( (questo = (TSystemFile*) next()) ) {
1067                TString name =  questo-> GetName();
1068                if( name.EndsWith(".root") ){
1069    //              const char *fullpath = gSystem->FindFile(ddir,name);
1070    //              char *fullpath;
1071    //              gSystem->IsFileInIncludePath(name,&fullpath);
1072                    char *fullpath = gSystem->ConcatFileName(gSystem->DirName(ddir),gSystem->BaseName(name));
1073                    contents->Add(new TSystemFile(fullpath,gSystem->DirName(fullpath)));
1074                    delete fullpath;
1075                };
1076            }
1077            delete temp;
1078            delete datadir;
1079            
1080        };
1081        gSystem->ChangeDirectory(wdir); // back to the working directory
1082    //      cout << endl << "Selected files:" << endl;
1083    //      contents->Print();
1084        cout << contents->GetEntries()<<" files \n";
1085    //      cout << endl;
1086    //      cout << "Working directory: "<< gSystem->WorkingDirectory()<< endl;
1087        return contents;
1088    };
1089    //--------------------------------------
1090    //
1091    //
1092    //--------------------------------------
1093    /**
1094     * Get the Pamela detector chains from a list of files and make them friends.
1095     * @param fl Pointer to a TList of TSystemFiles
1096     * @param detlist String to select trees to be included
1097     * @return Pointer to a TChain
1098     */
1099    TChain *PamLevel2::GetPamTree(TList *fl, TString detlist ){
1100        
1101        TChain *Trout =0;
1102    
1103    //    if( !detlist.IsNull() )SetWhichTrees(detlist);
1104        SetWhichTrees(detlist);
1105        
1106        cout<< "GetPamTree(TList*,TString): input detector list --> ";
1107        if(TRK1)cout<<"TRK1 ";
1108        if(TRK2)cout<<"TRK2 ";
1109        if(TRKh)cout<<"TRKH ";
1110        if(CAL1)cout<<"CAL1 ";
1111        if(CAL2)cout<<"CAL2 ";
1112        if(TOF)cout<<"TOF ";
1113        if(TRG)cout<<"TRG ";
1114        if(AC)cout<<"AC ";
1115        if(ND)cout<<"ND ";
1116        if(S4)cout<<"S4 ";
1117        if(ORB)cout<<"ORB ";
1118        cout << endl;
1119    
1120        TChain *T = 0;      
1121        TChain *C = 0;
1122        TChain *O = 0;
1123        TChain *R = 0;
1124        TChain *S = 0;
1125        TChain *N = 0;
1126        TChain *A = 0;
1127        TChain *B = 0;
1128    
1129        TChain *L = 0;
1130        
1131        if(TRK2||TRK1||TRKh) T = new TChain("Tracker");    
1132        if(CAL2||CAL1)       C = new TChain("Calorimeter");
1133        if(TOF)              O = new TChain("ToF");
1134        if(TRG)              R = new TChain("Trigger");
1135        if(S4)               S = new TChain("S4");
1136        if(ND)               N = new TChain("NeutronD");
1137        if(AC)               A = new TChain("Anticounter");
1138        if(ORB)              B = new TChain("OrbitalInfo");
1139    
1140         L = new TChain("SelectionList");
1141        
1142        // loop over files and create chains        
1143        TIter next(fl);
1144        TSystemFile *questo = 0;
1145        while ( (questo = (TSystemFile*) next()) ) {
1146            TString name =  questo->GetName();
1147            cout << "File: "<< name << endl;
1148            if( CheckLevel2File(name) ){
1149                if(TRK2||TRK1||TRKh) T->Add(name);
1150                if(CAL1||CAL2)       C->Add(name);
1151                if(TOF)              O->Add(name);
1152                if(TRG)              R->Add(name);
1153                if(S4)               S->Add(name);
1154                if(ND)               N->Add(name);
1155                if(AC)               A->Add(name);
1156                if(ORB)              B->Add(name);
1157                if(SELLI==1)         L->Add(name);
1158            };
1159        }
1160        
1161        cout << "done chain \n";
1162    
1163    //    UInt_t *found=0;
1164    // Tracker
1165        if(T && (TRK2||TRK1||TRKh)) {
1166            if(TRK2)T->SetBranchAddress("TrkLevel2", GetPointerTo("TrkLevel2"));
1167    //      else    T->SetBranchStatus("TrkLevel2",0,found);
1168            if(TRK2)cout << "Tracker      : set branch address TrkLevel2"<<endl;
1169            if(TRK1)T->SetBranchAddress("TrkLevel1", GetPointerTo("TrkLevel1"));
1170    //      else    T->SetBranchStatus("TrkLevel1",0,found);
1171            if(TRK1)cout << "Tracker      : set branch address TrkLevel1"<<endl;
1172            if(TRKh)T->SetBranchAddress("TrkHough", GetPointerTo("TrkHough"));
1173    //      else    T->SetBranchStatus("TrkHough",0,found);
1174            if(TRKh)cout << "Tracker      : set branch address TrkHough"<<endl;
1175            if(!Trout)Trout=T;
1176            else Trout->AddFriend("Tracker");
1177        }else{
1178            cout << "Tracker      : missing tree"<<endl;
1179        };
1180        // Calorimeter
1181        if(C && (CAL2||CAL1)) {
1182            if(CAL2)C->SetBranchAddress("CaloLevel2", GetPointerTo("CaloLevel2"));
1183    //      else    C->SetBranchStatus("CaloLevel2",0,found);
1184            if(CAL2)cout << "Calorimeter  : set branch address CaloLevel2"<<endl;
1185            if(CAL1)C->SetBranchAddress("CaloLevel1", GetPointerTo("CaloLevel1"));
1186    //      else    C->SetBranchStatus("CaloLevel1",0,found);
1187            if(CAL1)cout << "Calorimeter  : set branch address CaloLevel1"<<endl;
1188            if(!Trout)Trout=C;
1189            else Trout->AddFriend("Calorimeter");
1190        }else{
1191            cout << "Calorimeter  : missing tree"<<endl;
1192        };
1193        // ToF    
1194        if(O && TOF) {
1195            O->SetBranchAddress("ToFLevel2", GetPointerTo("ToFLevel2"));
1196            cout << "ToF          : set branch address ToFLevel2"<<endl;
1197            if(!Trout)Trout=O;
1198            else Trout->AddFriend("ToF");
1199        }else{
1200            cout << "ToF         : missing tree"<<endl;
1201        };
1202        // Trigger
1203        if(R && TRG) {
1204            R->SetBranchAddress("TrigLevel2", GetPointerTo("TrigLevel2"));
1205            cout << "Trigger      : set branch address TrigLevel2"<<endl;
1206            if(!Trout)Trout=O;
1207            else Trout->AddFriend("Trigger");
1208        }else{
1209            cout << "Trigger      : missing tree"<<endl;
1210        };
1211        // S4
1212        if(S && S4) {
1213            S->SetBranchAddress("S4Level2", GetPointerTo("S4Level2"));
1214            cout << "S4           : set branch address S4Level2"<<endl;
1215            if(!Trout)Trout=O;
1216            else Trout->AddFriend("S4");
1217        }else{
1218            cout << "S4           : missing tree"<<endl;
1219        };
1220        // Neutron Detector
1221        if(N && ND) {
1222            N->SetBranchAddress("NDLevel2", GetPointerTo("NDLevel2"));
1223            cout << "NeutronD     : set branch address NDLevel2"<<endl;
1224            if(!Trout)Trout=O;
1225            else Trout->AddFriend("NeutronD");
1226        }else{
1227            cout << "NeutronD     : missing tree"<<endl;
1228        };
1229        // Anticounters
1230        if(A && AC) {
1231            A->SetBranchAddress("AcLevel2", GetPointerTo("AcLevel2"));
1232          cout << "Anticounter  : set branch address AcLevel2"<<endl;          cout << "Anticounter  : set branch address AcLevel2"<<endl;
1233          if(!Tout)Tout=O;          if(!Trout)Trout=O;
1234          else Tout->AddFriend(A);          else Trout->AddFriend("Anticounter");
1235      }else{      }else{
1236          cout << "Anticounter  : missing tree"<<endl;          cout << "Anticounter  : missing tree"<<endl;
1237      };      };
1238        // Orbital Info
1239        if(B && ORB) {
1240            B->SetBranchAddress("OrbitalInfo", GetPointerTo("OrbitalInfo"));
1241            cout << "OrbitalInfo  : set branch address OrbitalInfo"<<endl;
1242            if(!Trout)Trout=O;
1243            else Trout->AddFriend("OrbitalInfo");
1244        }else{
1245            cout << "OrbitalInfo  : missing tree"<<endl;
1246        };
1247    
1248        // Selection List
1249        if(L && SELLI==1) {
1250            cout<<">>> Found selection-list <<<"<<endl;
1251            L->SetBranchAddress("RunEntry",&irun);
1252            cout << "SelectionList: set branch address RunEntry"<<endl;
1253            L->SetBranchAddress("EventEntry",&irunentry);
1254            cout << "SelectionList: set branch address EventEntry"<<endl;
1255            sel_tree = L;
1256    //      if(!Trout)Trout=O;
1257    //      else Trout->AddFriend("SelectionList");
1258        }else{
1259    //      cout << "SelectionList  : missing tree"<<endl;
1260            if(L)L->Delete();
1261        };
1262        
1263    //    cout<<endl<<" Number of entries: "<<Trout->GetEntries()<<endl<<endl;
1264    
1265        pam_tree = Trout;
1266    
1267        return Trout;
1268    }
1269    
1270    
1271    
1272    //--------------------------------------
1273    //
1274    //
1275    //--------------------------------------
1276    /**
1277     * Set branch addresses for Pamela friend trees
1278     */
1279    void PamLevel2::SetBranchAddress(TTree *t){
1280    
1281        TRK2    = TRK2 & t->GetBranchStatus("TrkLevel2");
1282        TRK1    = TRK1 & t->GetBranchStatus("TrkLevel1");
1283        TRKh    = TRKh & t->GetBranchStatus("TrkHough");
1284        CAL2    = CAL2 & t->GetBranchStatus("CaloLevel2");
1285        CAL1    = CAL1 & t->GetBranchStatus("CaloLevel1");
1286        TOF    = TOF & t->GetBranchStatus("ToFLevel2");
1287        TRG    = TRG & t->GetBranchStatus("TrigLevel2");
1288        S4     = S4  & t->GetBranchStatus("S4Level2");
1289        ND     = ND  & t->GetBranchStatus("NDLevel2");
1290        AC     = AC  & t->GetBranchStatus("AcLevel2");
1291        ORB    = ORB & t->GetBranchStatus("OrbitalInfo");
1292    
1293    
1294        // Tracker
1295        if(TRK1) {
1296            t->SetBranchAddress("TrkLevel1", GetPointerTo("TrkLevel2"));
1297            cout << "Tracker      : set branch address TrkLevel1"<<endl;
1298        };
1299        if(TRK2) {
1300            t->SetBranchAddress("TrkLevel2", GetPointerTo("TrkLevel1"));
1301            cout << "Tracker      : set branch address TrkLevel2"<<endl;
1302        };
1303        if(TRKh) {
1304            t->SetBranchAddress("TrkHough", GetPointerTo("TrkHough"));
1305            cout << "Tracker      : set branch address TrkHough"<<endl;
1306        };
1307        
1308        // Calorimeter
1309        if(CAL1) {
1310            t->SetBranchAddress("CaloLevel1", GetPointerTo("CaloLevel1"));
1311            cout << "Calorimeter  : set branch address CaloLevel1"<<endl;
1312        };
1313        if(CAL2) {
1314            t->SetBranchAddress("CaloLevel2", GetPointerTo("CaloLevel2"));
1315            cout << "Calorimeter  : set branch address CaloLevel2"<<endl;
1316        };
1317        
1318        // ToF    
1319        if(TOF) {
1320            t->SetBranchAddress("ToFLevel2", GetPointerTo("ToFLevel2"));
1321            cout << "ToF          : set branch address ToFLevel2"<<endl;
1322        };
1323        // Trigger
1324        if(TRG) {
1325            t->SetBranchAddress("TrigLevel2", GetPointerTo("TrigLevel2"));
1326            cout << "Trigger      : set branch address TrigLevel2"<<endl;
1327        };
1328        // S4
1329        if(S4) {
1330            t->SetBranchAddress("S4Level2", GetPointerTo("S4Level2"));
1331            cout << "S4           : set branch address S4Level2"<<endl;
1332        };
1333        // Neutron Detector
1334        if(ND) {
1335            t->SetBranchAddress("NDLevel2", GetPointerTo("NDLevel2"));
1336            cout << "NeutronD     : set branch address NDLevel2"<<endl;
1337        };
1338        // Anticounters
1339        if(AC) {
1340            t->SetBranchAddress("AcLevel2", GetPointerTo("AcLevel2"));
1341            cout << "Anticounter  : set branch address AcLevel2"<<endl;
1342        };
1343        // OrbitalInfo
1344        if(ORB) {
1345            t->SetBranchAddress("OrbitalInfo", GetPointerTo("OrbitalInfo"));
1346            cout << "OrbitalInfo  : set branch address OrbitalInfo"<<endl;
1347        };
1348        // SelectionList
1349        if(SELLI==1) {
1350            t->SetBranchAddress("RunEntry", &irun);
1351            cout << "SelectionList: set branch address RunEntry"<<endl;
1352            t->SetBranchAddress("EventEntry", &irunentry);
1353            cout << "SelectionList: set branch address EventEntry"<<endl;
1354        };
1355        
1356    }
1357    /**
1358     * Set branch addresses for Pamela friend trees
1359     */
1360    void PamLevel2::SetBranchAddress(TChain *t){
1361    
1362        TRK2    = TRK2 & t->GetBranchStatus("TrkLevel2");
1363        TRK1    = TRK1 & t->GetBranchStatus("TrkLevel1");
1364        TRKh    = TRKh & t->GetBranchStatus("TrkHough");
1365        CAL1    = CAL1 & t->GetBranchStatus("CaloLevel1");
1366        CAL2    = CAL2 & t->GetBranchStatus("CaloLevel2");
1367        TOF    = TOF & t->GetBranchStatus("ToFLevel2");
1368        TRG    = TRG & t->GetBranchStatus("TrigLevel2");
1369        S4     = S4  & t->GetBranchStatus("S4Level2");
1370        ND     = ND  & t->GetBranchStatus("NDLevel2");
1371        AC     = AC  & t->GetBranchStatus("AcLevel2");
1372        ORB    = ORB & t->GetBranchStatus("OrbitalInfo");
1373    
1374        // Tracker
1375         if(TRK2) {
1376            t->SetBranchAddress("TrkLevel2", GetPointerTo("TrkLevel2"));
1377            cout << "Tracker      : set branch address TrkLevel2"<<endl;
1378        };
1379        if(TRK1) {
1380            t->SetBranchAddress("TrkLevel1", GetPointerTo("TrkLevel1"));
1381            cout << "Tracker      : set branch address TrkLevel1"<<endl;
1382        };
1383         if(TRKh) {
1384            t->SetBranchAddress("TrkHough", GetPointerTo("TrkHough"));
1385            cout << "Tracker      : set branch address TrkHough"<<endl;
1386         };
1387        
1388        // Calorimeter
1389        if(CAL2) {
1390            t->SetBranchAddress("CaloLevel2", GetPointerTo("CaloLevel2"));
1391            cout << "Calorimeter  : set branch address CaloLevel2"<<endl;
1392        };  
1393        if(CAL1) {
1394            t->SetBranchAddress("CaloLevel1", GetPointerTo("CaloLevel1"));
1395            cout << "Calorimeter  : set branch address CaloLevel1"<<endl;
1396        };
1397        
1398        // ToF    
1399        if(TOF) {
1400            t->SetBranchAddress("ToFLevel2", GetPointerTo("ToFLevel2"));
1401            cout << "ToF          : set branch address ToFLevel2"<<endl;
1402        };
1403        // Trigger
1404        if(TRG) {
1405            t->SetBranchAddress("TrigLevel2", GetPointerTo("TrigLevel2"));
1406            cout << "Trigger      : set branch address TrigLevel2"<<endl;
1407        };
1408        // S4
1409        if(S4) {
1410            t->SetBranchAddress("S4Level2", GetPointerTo("S4Level2"));
1411            cout << "S4           : set branch address S4Level2"<<endl;
1412        };
1413        // Neutron Detector
1414        if(ND) {
1415            t->SetBranchAddress("NDLevel2", GetPointerTo("NDLevel2"));
1416            cout << "NeutronD     : set branch address NDLevel2"<<endl;
1417        };
1418        // Anticounters
1419        if(AC) {
1420            t->SetBranchAddress("AcLevel2", GetPointerTo("AcLevel2"));
1421            cout << "Anticounter  : set branch address AcLevel2"<<endl;
1422        };
1423        // OrbitalInfo
1424        if(ORB) {
1425            t->SetBranchAddress("OrbitalInfo", GetPointerTo("OrbitalInfo"));
1426            cout << "OrbitalInfo  : set branch address OrbitalInfo"<<endl;
1427        };
1428        // SelectionList
1429        if(SELLI==1) {
1430            t->SetBranchAddress("RunEntry", &irun);
1431            cout << "SelectionList: set branch address RunEntry"<<endl;
1432            t->SetBranchAddress("EventEntry", &irunentry);
1433            cout << "SelectionList: set branch address EventEntry"<<endl;
1434        };
1435        
1436    }
1437    
1438    
1439    //--------------------------------------
1440    //
1441    //
1442    //--------------------------------------
1443    /**
1444     * Get the Run tree chain from a list of files.
1445     * @param fl Pointer to a TList of TSystemFiles
1446     * @return Pointer to a TChain
1447     */
1448    TChain *PamLevel2::GetRunTree(TList *fl){
1449            
1450        TChain *R = new TChain("Run");
1451        
1452        // loop over files and create chains        
1453        TIter next(fl);
1454        TSystemFile *questo = 0;
1455        while ( (questo = (TSystemFile*) next()) ) {
1456            TString name =  questo->GetName();
1457    //              cout << "File: "<< name << endl;
1458            if( CheckLevel2File(name) ){
1459                R->Add(name);
1460            };
1461        }
1462    
1463        if(R->GetNtrees()){
1464        
1465            R->SetBranchAddress("RunInfo", GetPointerTo("RunInfo"));
1466            cout << "Run         : set branch address RunInfo"<<endl;
1467            R->SetBranchAddress("SoftInfo", GetPointerTo("SoftInfo")); // Emiliano
1468            cout << "Software    : set branch address SoftInfo"<<endl; // Emiliano
1469        }else{
1470            delete R;
1471            R=0;
1472        }
1473    
1474        run_tree = R;
1475    
1476        return R;
1477        
1478    }
1479    //--------------------------------------
1480    //
1481    //
1482    //--------------------------------------
1483    /**
1484     * Get the Run tree  from a file.
1485     * @param f Pointer to a TFile
1486     * @return Pointer to a TTree
1487     */
1488    TTree *PamLevel2::GetRunTree(TFile *f){
1489    
1490        cout << "TTree *PamLevel2::GetRunTree(TFile *f) -- obsolte "<<endl;
1491    
1492        TTree *R = (TTree*)f->Get("Run");
1493        
1494        if(R){
1495            R->SetBranchAddress("RunInfo", GetPointerTo("RunInfo"));
1496            cout << "Run         : set branch address RunInfo"<<endl;
1497            R->SetBranchAddress("SoftInfo", GetPointerTo("SoftInfo")); // Emiliano
1498            cout << "Software    : set branch address SoftInfo"<<endl; // Emiliano
1499        }
1500        return R;
1501        
1502    }
1503    /**
1504     * Update the runinfo informations (to be used to have Run infos event by event basis)
1505     * @param run Pointer to the chain/tree which contains run infos
1506     * @return true if a new run has been read, false if it is still the same run
1507     */
1508    Bool_t PamLevel2::UpdateRunInfo(TChain *run, ULong64_t iev){
1509      //
1510      // check if we have already called once GetEntry, if not call it
1511      //
1512      if ( run->GetEntries() <= 0 ) return(false);
1513      //
1514      
1515      Int_t oldrun = irun;
1516      // --------------------------------------
1517      // if it is a full file (not preselected)
1518      // --------------------------------------
1519      if(SELLI==0){
1520          if ( irun < 0 ){
1521              irun = 0;
1522              run->GetEntry(0);
1523              runfirstentry = 0ULL;
1524              runlastentry += (ULong64_t)(this->GetRunInfo()->NEVENTS) - 1ULL;
1525          };
1526          while ( iev > (runfirstentry+(ULong64_t)(this->GetRunInfo()->NEVENTS-1)) && irun < run->GetEntries() ){
1527              //    printf(" iev %llu %u %llu \n",iev,this->GetRunInfo()->NEVENTS,(ULong64_t)(runfirstentry+(ULong64_t)(this->GetRunInfo()->NEVENTS)));
1528              irun++;
1529              run->GetEntry(irun);
1530              runfirstentry = runlastentry+1ULL;
1531              runlastentry += (ULong64_t)(this->GetRunInfo()->NEVENTS);
1532          };
1533          //
1534          if ( irun == oldrun || irun >= run->GetEntries() ) return(false);
1535          //
1536          //  printf(" iev %llu irun %i nevents %u 1st %llu last %llu \n",iev,irun,this->GetRunInfo()->NEVENTS,(ULong64_t)runfirstentry,(ULong64_t)runlastentry);
1537          //
1538          return(true);    
1539      };
1540      // ----------------------------------------------------
1541      // if it is a preselected file (there is SelectionList)
1542      // NBNB - the event tree MUST be read first
1543      // ----------------------------------------------------
1544      if(SELLI==1){      
1545          sel_tree->GetEntry(iev);
1546          if(irun != oldrun){
1547              run->GetEntry(irun);
1548              return true;
1549          }
1550          return false;
1551      }
1552    
1553      return false;
1554      //
1555    };
1556    /**
1557     * Update the runinfo informations (to be used to have Run infos event by event basis)
1558     * @param run Pointer to the chain/tree which contains run infos
1559     * @return true if a new run has been read, false if it is still the same run
1560     */
1561    Bool_t PamLevel2::UpdateRunInfo(TTree *run, ULong64_t iev){
1562      return(UpdateRunInfo((TChain*)run,iev));
1563    };
1564    
1565    //--------------------------------------
1566    //
1567    //
1568    //--------------------------------------
1569    /**
1570     * Set which trees shoul be analysed
1571     * @param detlist TString containing the sequence of trees required
1572    */
1573    void PamLevel2::SetWhichTrees(TString detlist){
1574            
1575        if(detlist.IsNull() || detlist.Contains("+ALL", TString::kIgnoreCase)){
1576            CAL0 = false;
1577            CAL1 = true;
1578            CAL2 = true;
1579            TRK2 = true;
1580            TRK1 = false;
1581            TRKh = false;
1582            TRK0 = false;
1583            TRG = true;
1584            TOF = true;
1585            TOF0 = false;
1586            S4  = true;
1587            ND  = true;
1588            AC  = true;
1589            ORB = true;
1590        }else if( detlist.Contains("-ALL", TString::kIgnoreCase) ){
1591            CAL0 = false;
1592            CAL1 = false;
1593            CAL2 = false;
1594            TRK2 = false;
1595            TRK1 = false;
1596            TRKh = false;
1597            TRK0 = false;
1598            TRG = false;
1599            TOF = false;
1600            TOF0 = false;
1601            S4  = false;
1602            ND  = false;
1603            AC  = false;
1604            ORB = false;
1605        };
1606        
1607    //  -------------------------------------------------------------------------
1608        if( detlist.Contains("CAL1", TString::kIgnoreCase) ){
1609            if ( detlist.Contains("-CAL1", TString::kIgnoreCase) )CAL1=false;
1610            if ( detlist.Contains("+CAL1", TString::kIgnoreCase) )CAL1=true;
1611        };
1612    
1613        if( detlist.Contains("CAL0", TString::kIgnoreCase) ){
1614            if ( detlist.Contains("-CAL0", TString::kIgnoreCase) )CAL0=false;
1615            if ( detlist.Contains("+CAL0", TString::kIgnoreCase) )CAL0=true;
1616        };
1617            
1618        if( detlist.Contains("CAL2", TString::kIgnoreCase)){
1619            if ( detlist.Contains("-CAL2", TString::kIgnoreCase) )CAL2=false;
1620            if ( detlist.Contains("+CAL2", TString::kIgnoreCase) )CAL2=true;
1621        };
1622            
1623        if( detlist.Contains("+CAL", TString::kIgnoreCase) && !CAL1 && !CAL2 )CAL2=true;
1624        if( detlist.Contains("-CAL", TString::kIgnoreCase) && CAL1 && CAL2 ){
1625            CAL2=false;
1626            CAL1=false;
1627        }
1628    //  -------------------------------------------------------------------------
1629        if( detlist.Contains("TRK0", TString::kIgnoreCase) ){
1630            if ( detlist.Contains("-TRK0", TString::kIgnoreCase) )TRK0=false;
1631            if ( detlist.Contains("+TRK0", TString::kIgnoreCase) )TRK0=true;
1632        };
1633    
1634        if( detlist.Contains("TRK1", TString::kIgnoreCase) ){
1635            if ( detlist.Contains("-TRK1", TString::kIgnoreCase) )TRK1=false;
1636            if ( detlist.Contains("+TRK1", TString::kIgnoreCase) )TRK1=true;
1637        };
1638            
1639        if( detlist.Contains("TRK2", TString::kIgnoreCase)){
1640            if ( detlist.Contains("-TRK2", TString::kIgnoreCase) )TRK2=false;
1641            if ( detlist.Contains("+TRK2", TString::kIgnoreCase) )TRK2=true;
1642        };
1643    
1644        if( detlist.Contains("TRKh", TString::kIgnoreCase)){
1645            if ( detlist.Contains("-TRKh", TString::kIgnoreCase) )TRKh=false;
1646            if ( detlist.Contains("+TRKh", TString::kIgnoreCase) )TRKh=true;
1647        };
1648            
1649        if( detlist.Contains("+TRK", TString::kIgnoreCase) && !TRK1 && !TRK2 && !TRKh )TRK2=true;
1650        if( detlist.Contains("-TRK", TString::kIgnoreCase) && TRK1 && TRK2 && TRKh){
1651            TRK2=false;
1652            TRK1=false;
1653            TRKh=false;
1654        }
1655    //  -------------------------------------------------------------------------
1656        
1657        if( detlist.Contains("-TRG", TString::kIgnoreCase) )TRG = false;
1658        else if( detlist.Contains("+TRG", TString::kIgnoreCase) )TRG = true;
1659        
1660        if( detlist.Contains("-TOF", TString::kIgnoreCase) )TOF = false;
1661        else if( detlist.Contains("+TOF", TString::kIgnoreCase) )TOF = true;
1662    
1663        if( detlist.Contains("-TOF0", TString::kIgnoreCase) )TOF0 = false;
1664        else if( detlist.Contains("+TOF0", TString::kIgnoreCase) )TOF0 = true;
1665        
1666        if( detlist.Contains("-S4",  TString::kIgnoreCase) )S4  = false;
1667        else if( detlist.Contains("+S4",  TString::kIgnoreCase) )S4  = true;
1668        
1669        if( detlist.Contains("-ND",  TString::kIgnoreCase) )ND  = false;
1670        else if( detlist.Contains("+ND",  TString::kIgnoreCase) )ND  = true;
1671        
1672        if( detlist.Contains("-AC",  TString::kIgnoreCase) )AC  = false;
1673        else if( detlist.Contains("+AC",  TString::kIgnoreCase) )AC  = true;
1674        
1675        if( detlist.Contains("-ORB", TString::kIgnoreCase) )ORB = false;
1676        else if( detlist.Contains("+ORB", TString::kIgnoreCase) )ORB = true;
1677    
1678    //     cout<< "Set detector list --> ";
1679    //     if(TRK1)cout<<"TRK1 ";
1680    //     if(TRK2)cout<<"TRK2 ";
1681    //     if(TRKh)cout<<"TRKH ";
1682    //     if(CAL1)cout<<"CAL1 ";
1683    //     if(CAL2)cout<<"CAL2 ";
1684    //     if(TOF)cout<<"TOF ";
1685    //     if(TRG)cout<<"TRG ";
1686    //     if(AC)cout<<"AC ";
1687    //     if(ND)cout<<"ND ";
1688    //     if(S4)cout<<"S4 ";
1689    //     if(ORB)cout<<"ORB ";
1690    //     cout << endl;
1691        
1692    };
1693    
1694    
1695    /**
1696     * Set tree/branch detector flags from the content of a tree
1697     */
1698    void  PamLevel2::GetWhichTrees(TFile* f){
1699        
1700    
1701    
1702        cout << "void  PamLevel2::GetWhichTrees(TFile* f) --- WARNING!! --- ...potrebbe non funzionare "<<endl;
1703        // -----------
1704        // reset flags
1705        // -----------
1706        CAL1   = false;    
1707        CAL2   = false;    
1708        TRK2   = false;    
1709        TRK1   = false;    
1710        TRKh   = false;    
1711        TRG    = false;    
1712        TOF    = false;    
1713        S4     = false;    
1714        ND     = false;    
1715        AC     = false;    
1716        ORB    = false;    
1717        
1718        RUN    = false;
1719            
1720        cout << "Checking file: "<<f->GetName()<<endl;
1721        if( !f || f->IsZombie() ){
1722            cout << "File: "<< f->GetName() <<" Non valid root file"<< endl;
1723            return;
1724        }
1725    
1726        TList *lk = f->GetListOfKeys();
1727        TIter next(lk);
1728        TKey *key =0;
1729    
1730        Int_t nev = 0;
1731    
1732        while( (key = (TKey*)next()) ){
1733            
1734            if( !strcmp(key->GetName(),"Run"        ) )RUN = true;
1735    
1736            //=========================================================    
1737            if( !strcmp(key->GetName(),"Trigger"    ) ){
1738                TRG = true;
1739                Int_t nevt = ((TTree*)f->Get("Trigger"))->GetEntries();
1740                if( nev && nevt!=nev){
1741                    cout << "File: "<< f->GetName() <<" Trigger tree has "<<nevt<<" events instead of "<<nev<< endl;
1742                    TRG = false;
1743                }else nev=nevt;
1744            }
1745            //=========================================================    
1746            if( !strcmp(key->GetName(),"ToF"        ) ){
1747                TOF = true;
1748                Int_t nevt = ((TTree*)f->Get("ToF"))->GetEntries();
1749                if( nev && nevt!=nev){
1750                    cout << "File: "<< f->GetName() <<"     ToF tree has "<<nevt<<" events instead of "<<nev<< endl;
1751                    TOF = false;
1752                }else nev=nevt;
1753            }
1754            //=========================================================  
1755            if( !strcmp(key->GetName(),"S4"         ) ){
1756                S4 = true;
1757                Int_t nevt = ((TTree*)f->Get("S4"))->GetEntries();
1758                if( nev && nevt!=nev){
1759                    cout << "File: "<< f->GetName() <<"      S4 tree has "<<nevt<<" events instead of "<<nev<< endl;
1760                    S4 = false;
1761                }else nev=nevt;
1762            }
1763            //=========================================================  
1764    
1765            if( !strcmp(key->GetName(),"NeutronD"   ) ){
1766                ND = true;
1767                Int_t nevt = ((TTree*)f->Get("NeutronD"))->GetEntries();
1768                if( nev && nevt!=nev){
1769                    cout << "File: "<< f->GetName() <<"NeutronD tree has "<<nevt<<" events instead of "<<nev<< endl;
1770                    ND =false;
1771                }else nev=nevt;
1772            }      
1773            //=========================================================  
1774            if( !strcmp(key->GetName(),"Anticounter") ){
1775                AC = true;
1776                Int_t nevt = ((TTree*)f->Get("Anticounter"))->GetEntries();
1777                if( nev && nevt!=nev){
1778                    cout << "File: "<< f->GetName() <<" Anticounter tree has "<<nevt<<" events instead of "<<nev<< endl;
1779                    AC =false;
1780                }else nev=nevt;
1781            }
1782            //=========================================================  
1783            if( !strcmp(key->GetName(),"OrbitalInfo") ){
1784                ORB = true;
1785                Int_t nevt = ((TTree*)f->Get("OrbitalInfo"))->GetEntries();
1786                if( nev && nevt!=nev){
1787                    cout << "File: "<< f->GetName() <<" OrbitalInfo tree has "<<nevt<<" events instead of "<<nev<< endl;
1788                    ORB = false;
1789                }else nev=nevt;
1790            }
1791            //=========================================================  
1792            if( !strcmp(key->GetName(),"Tracker"    ) ){
1793                TTree *T = (TTree*)f->Get("Tracker");
1794                for(Int_t i=0; i<T->GetListOfBranches()->GetEntries(); i++){
1795                    TString name = T->GetListOfBranches()->At(i)->GetName();
1796                    if( !name.CompareTo("TrkLevel1") )TRK1=true;
1797                    if( !name.CompareTo("TrkLevel2") )TRK2=true;
1798                    if( !name.CompareTo("TrkHough") )TRKh=true;
1799                };      
1800                Int_t nevt = T->GetEntries();
1801                if( nev && nevt!=nev){
1802                    cout << "File: "<< f->GetName() <<" Tracker tree has "<<nevt<<" events instead of "<<nev<< endl;
1803                    TRK1 = false;
1804                    TRK2 = false;
1805                    TRKh = false;
1806                }else nev=nevt;
1807                T->Delete();
1808            };
1809            //=========================================================  
1810            if( !strcmp(key->GetName(),"Calorimeter"    ) ){
1811                TTree *T = (TTree*)f->Get("Calorimeter");
1812                for(Int_t i=0; i<T->GetListOfBranches()->GetEntries(); i++){
1813                    TString name = T->GetListOfBranches()->At(i)->GetName();
1814                    if( !name.CompareTo("CaloLevel1") )CAL1=true;
1815                    if( !name.CompareTo("CaloLevel2") )CAL2=true;
1816                };    
1817                Int_t nevt = T->GetEntries();
1818                if( nev && nevt!=nev){
1819                    cout << "File: "<< f->GetName() <<"  Calorimeter tree has "<<nevt<<" events instead of "<<nev<< endl;
1820                    CAL1 = false;
1821                    CAL2 = false;
1822                }else nev=nevt;
1823                T->Delete();
1824            };      
1825    
1826        };
1827        
1828        delete lk;
1829    
1830    //     cout<< "Get detector list from input file --> ";
1831    //     if(TRK1)cout<<"TRK1 ";
1832    //     if(TRK2)cout<<"TRK2 ";
1833    //     if(TRKh)cout<<"TRKH ";
1834    //     if(CAL1)cout<<"CAL1 ";
1835    //     if(CAL2)cout<<"CAL2 ";
1836    //     if(TOF)cout<<"TOF ";
1837    //     if(TRG)cout<<"TRG ";
1838    //     if(AC)cout<<"AC ";
1839    //     if(ND)cout<<"ND ";
1840    //     if(S4)cout<<"S4 ";
1841    //     if(ORB)cout<<"ORB ";
1842    //     cout << endl;
1843          
1844        return ;
1845            
1846    };
1847    
1848    
1849    //--------------------------------------
1850    //
1851    //
1852    //--------------------------------------
1853    /**
1854     * Check if a file contains selected Pamela Level2 trees.
1855     * @param name File name
1856     * @return true if the file is ok.
1857     */
1858    Bool_t  PamLevel2::CheckLevel2File(TString name){
1859            
1860        Bool_t CAL1__ok   = false;    
1861        Bool_t CAL2__ok   = false;    
1862        Bool_t TRK2__ok   = false;    
1863        Bool_t TRK1__ok   = false;    
1864        Bool_t TRKh__ok   = false;    
1865        Bool_t TRG__ok    = false;    
1866        Bool_t TOF__ok    = false;    
1867        Bool_t S4__ok     = false;    
1868        Bool_t ND__ok     = false;    
1869        Bool_t AC__ok     = false;    
1870        Bool_t ORB__ok    = false;    
1871        
1872        Bool_t RUN__ok    = false;
1873        
1874        Bool_t SELLI__ok  = false;
1875    
1876        cout << "Checking file: "<<name<<endl;
1877        TFile *f = new TFile(name.Data());
1878        if( !f || f->IsZombie() ){
1879            cout << "File: "<< f->GetName() <<" discarded ---- Non valid root file"<< endl; return false;
1880        }
1881    //    cout << "Get list of keys: "<<f<<endl;
1882        TList *lk = f->GetListOfKeys();
1883    //    lk->Print();
1884        TIter next(lk);
1885        TKey *key =0;
1886    
1887        Int_t nev = 0;
1888    
1889        while( (key = (TKey*)next()) ){
1890            
1891    //      cout << key->GetName() << endl;
1892    //      cout << key->GetName() << ""<<key->GetClassName()<<endl;
1893    //              cout << " Get tree: " << f->Get(key->GetName())<<endl;
1894    //      nev_previous = nev;
1895    //      cout << " n.entries  "<< nev <<endl;
1896    //      if( key->GetClassName()=="TTree" && nev_previous && nev != nev_previous ){
1897    //          nev = ((TTree*)f->Get(key->GetName()))->GetEntries();
1898    //          cout << "File: "<< f->GetName() <<" discarded ---- "<< key->GetName() << " tree: n.entries does not match "<<nev<<" "<<nev_previous<< endl;
1899    //          return false;
1900    //      };
1901    
1902    
1903            if( !strcmp(key->GetName(),"Run"        ) )RUN__ok = true;      
1904    
1905            //=========================================================    
1906            if( !strcmp(key->GetName(),"SelectionList"    ) ){
1907                SELLI__ok = true;
1908                if(SELLI==1){
1909                    Int_t nevt = ((TTree*)f->Get("SelectionList"))->GetEntries();
1910                    if( nev && nevt!=nev){
1911                        cout << "File: "<< f->GetName() <<" discarded ---- SelectionList tree has "<<nevt<<" events instead of "<<nev<< endl;
1912                        return false;
1913                    }
1914                    nev=nevt;
1915                }
1916            }
1917    
1918            //=========================================================    
1919            if( !strcmp(key->GetName(),"Trigger"    ) ){
1920                TRG__ok = true;
1921                if(TRG){
1922                    Int_t nevt = ((TTree*)f->Get("Trigger"))->GetEntries();
1923                    if( nev && nevt!=nev){
1924                        cout << "File: "<< f->GetName() <<" discarded ---- Trigger tree has "<<nevt<<" events instead of "<<nev<< endl;
1925                        return false;
1926                    }
1927                    nev=nevt;
1928                }
1929            }
1930            //=========================================================    
1931            if( !strcmp(key->GetName(),"ToF"        ) ){
1932                TOF__ok = true;
1933                if(TOF){
1934                    Int_t nevt = ((TTree*)f->Get("ToF"))->GetEntries();
1935                    if( nev && nevt!=nev){
1936                        cout << "File: "<< f->GetName() <<" discarded ---- ToF tree has "<<nevt<<" events instead of "<<nev<< endl;
1937                        return false;
1938                    }
1939                    nev=nevt;
1940                }
1941            }
1942            //=========================================================  
1943            if( !strcmp(key->GetName(),"S4"         ) ){
1944                S4__ok = true;
1945                if(S4){
1946                    Int_t nevt = ((TTree*)f->Get("S4"))->GetEntries();
1947                    if( nev && nevt!=nev){
1948                        cout << "File: "<< f->GetName() <<" discarded ---- S4 tree has "<<nevt<<" events instead of "<<nev<< endl;
1949                        return false;
1950                    }
1951                    nev=nevt;
1952                }
1953            }
1954            //=========================================================  
1955    
1956            if( !strcmp(key->GetName(),"NeutronD"   ) ){
1957                ND__ok = true;
1958                if(ND){
1959                    Int_t nevt = ((TTree*)f->Get("NeutronD"))->GetEntries();
1960                    if( nev && nevt!=nev){
1961                        cout << "File: "<< f->GetName() <<" discarded ---- NeutronD tree has "<<nevt<<" events instead of "<<nev<< endl;
1962                        return false;
1963                    }
1964                    nev=nevt;
1965                }
1966            }      
1967            //=========================================================  
1968            if( !strcmp(key->GetName(),"Anticounter") ){
1969                AC__ok = true;
1970                if(AC){
1971                    Int_t nevt = ((TTree*)f->Get("Anticounter"))->GetEntries();
1972                    if( nev && nevt!=nev){
1973                        cout << "File: "<< f->GetName() <<" discarded ---- Anticounter tree has "<<nevt<<" events instead of "<<nev<< endl;
1974                        return false;
1975                    }
1976                    nev=nevt;
1977                }
1978            }
1979            //=========================================================  
1980            if( !strcmp(key->GetName(),"OrbitalInfo") ){
1981                ORB__ok = true;
1982                if(ORB){
1983                    Int_t nevt = ((TTree*)f->Get("OrbitalInfo"))->GetEntries();
1984                    if( nev && nevt!=nev){
1985                        cout << "File: "<< f->GetName() <<" discarded ---- OrbitalInfo tree has "<<nevt<<" events instead of "<<nev<< endl;
1986                        return false;
1987                    }
1988                    nev=nevt;
1989                }
1990            }
1991            //=========================================================  
1992            if( !strcmp(key->GetName(),"Tracker"    ) ){
1993                TTree *T = (TTree*)f->Get("Tracker");
1994                if(TRK1||TRK2||TRKh){
1995                    Int_t nevt = T->GetEntries();
1996                    if( nev && nevt!=nev){
1997                        cout << "File: "<< f->GetName() <<" discarded ---- Tracker tree has "<<nevt<<" events instead of "<<nev<< endl;
1998                        return false;
1999                    }
2000                    nev=nevt;
2001                }
2002                for(Int_t i=0; i<T->GetListOfBranches()->GetEntries(); i++){
2003                    TString name = T->GetListOfBranches()->At(i)->GetName();
2004                    if( !name.CompareTo("TrkLevel1") )TRK1__ok=true;
2005                    if( !name.CompareTo("TrkLevel2") )TRK2__ok=true;
2006                    if( !name.CompareTo("TrkHough") )TRKh__ok=true;
2007                };      
2008                T->Delete();
2009            };
2010            //=========================================================  
2011            if( !strcmp(key->GetName(),"Calorimeter"    ) ){
2012                TTree *T = (TTree*)f->Get("Calorimeter");
2013                if(CAL1||CAL2){
2014                    Int_t nevt = T->GetEntries();
2015                    if( nev && nevt!=nev){
2016                        cout << "File: "<< f->GetName() <<" discarded ---- Calorimeter tree has "<<nevt<<" events instead of "<<nev<< endl;
2017                        return false;
2018                    }
2019                    nev=nevt;
2020                }
2021                for(Int_t i=0; i<T->GetListOfBranches()->GetEntries(); i++){
2022                    TString name = T->GetListOfBranches()->At(i)->GetName();
2023                    if( !name.CompareTo("CaloLevel1") )CAL1__ok=true;
2024                    if( !name.CompareTo("CaloLevel2") )CAL2__ok=true;
2025                };    
2026                T->Delete();
2027            };      
2028    
2029        };
2030    
2031        if( SELLI==-1 )SELLI = (Int_t)SELLI__ok;
2032        if( SELLI==0 && SELLI__ok ){
2033            cout << "File: "<< f->GetName() <<" discarded ---- found SelectionList (it is not a full-event file)" << endl;
2034            return false;  
2035        }
2036        if( SELLI==1 && !SELLI__ok ){
2037            cout << "File: "<< f->GetName() <<" discarded ---- SelectionList missing" << endl;
2038            return false;
2039        }
2040        
2041    //    cout << "SELLI "<<SELLI<<endl;
2042    
2043    //     cout<< "CheckLevel2File(TString): detector list --> ";
2044    //     if(TRK1__ok)cout<<"TRK1 ";
2045    //     if(TRK2__ok)cout<<"TRK2 ";
2046    //     if(TRKh__ok)cout<<"TRKH ";
2047    //     if(CAL1__ok)cout<<"CAL1 ";
2048    //     if(CAL2__ok)cout<<"CAL2 ";
2049    //     if(TOF__ok)cout<<"TOF ";
2050    //     if(TRG__ok)cout<<"TRG ";
2051    //     if(AC__ok)cout<<"AC ";
2052    //     if(ND__ok)cout<<"ND ";
2053    //     if(S4__ok)cout<<"S4 ";
2054    //     if(ORB__ok)cout<<"ORB ";
2055    //     cout << endl;
2056    
2057    
2058        if(TRK2 && TRK1__ok)TRK1=1;
2059    // ----------------------------------------------------------------------------
2060    // NOTA
2061    // se c'e` il level1, lo devo necessarimente leggere.
2062    // infatti (non ho capito perche`) i cluster vengono letti e allocati in memoria
2063    // comunque, ma non vengono disallocati da PamLevel2::Clear()
2064    // ----------------------------------------------------------------------------
2065    
2066    
2067        if(!RUN__ok) {
2068            cout << "File: "<< f->GetName() <<" *WARNING* ---- Missing RunInfo tree"<< endl;
2069    //      return false;
2070        };
2071    
2072        if(CAL1 && !CAL1__ok){
2073            cout << "File: "<< f->GetName() <<" discarded ---- Missing CaloLevel1 branch"<< endl;
2074            return false;
2075        };
2076        if(CAL2 && !CAL2__ok){
2077            cout << "File: "<< f->GetName() <<" discarded ---- Missing CaloLevel2 branch"<< endl;
2078            return false;
2079        };
2080        if(TRK2 && !TRK2__ok){
2081            cout << "File: "<< f->GetName() <<" discarded ---- Missing TrkLevel2 branch"<< endl;
2082            return false;
2083        };
2084        if(TRK1 && !TRK1__ok){
2085            cout << "File: "<< f->GetName() <<" discarded ---- Missing TrkLevel1 branch"<< endl;
2086            return false;
2087        };
2088        if(TRKh && !TRKh__ok){
2089            cout << "File: "<< f->GetName() <<" discarded ---- Missing TrkHough branch"<< endl;
2090            return false;
2091        };
2092        if(ORB && !ORB__ok){
2093            cout << "File: "<< f->GetName() <<" discarded ---- Missing ORB tree"<< endl;
2094            return false;
2095        };
2096        if(AC && !AC__ok){
2097            cout << "File: "<< f->GetName() <<" discarded ---- Missing AC tree"<< endl;
2098            return false;
2099        };
2100        if(S4 && !S4__ok){
2101            cout << "File: "<< f->GetName() <<" discarded ---- Missing S4 tree"<< endl;
2102            return false;
2103        };
2104        if(TOF && !TOF__ok){
2105            cout << "File: "<< f->GetName() <<" discarded ---- Missing ToF tree"<< endl;
2106            return false;
2107        };
2108    
2109        if(ND && !ND__ok){
2110            cout << "File: "<< f->GetName() <<" discarded ---- Missing ND tree"<< endl;
2111            return false;
2112        };
2113        if(TRG && !TRG__ok){
2114            cout << "File: "<< f->GetName() <<" discarded ---- Missing Trigger tree"<< endl;
2115            return false;
2116        };
2117        
2118    
2119    //    lk->Delete();
2120    //    delete lk;
2121        f->Close();
2122    
2123    //     cout<< "CheckLevel2File(TString): detector list --> ";
2124    //     if(TRK1)cout<<"TRK1 ";
2125    //     if(TRK2)cout<<"TRK2 ";
2126    //     if(TRKh)cout<<"TRKH ";
2127    //     if(CAL1)cout<<"CAL1 ";
2128    //     if(CAL2)cout<<"CAL2 ";
2129    //     if(TOF)cout<<"TOF ";
2130    //     if(TRG)cout<<"TRG ";
2131    //     if(AC)cout<<"AC ";
2132    //     if(ND)cout<<"ND ";
2133    //     if(S4)cout<<"S4 ";
2134    //     if(ORB)cout<<"ORB ";
2135    //     cout << endl;
2136          
2137        return true;
2138            
2139    };
2140    
2141    
2142    /**
2143     * Create clone-trees
2144     */
2145    void PamLevel2::CreateCloneTrees0( TChain *fChain, TFile *ofile ){
2146    
2147        cout << "+--+--+--+--+--+--+--+--+--+--+--+--+--+--+--+--+--+" <<endl;
2148        cout << "Create clones of PAMELA trees "<<endl;
2149        
2150        Int_t i=0;
2151        pam_tree_clone[i] = fChain->GetTree()->CloneTree(0);
2152        TString name =  pam_tree_clone[i]->GetName();
2153        name.Append("_clone");
2154    //    pam_tree_clone[i]->SetName(name.Data());
2155        cout << pam_tree_clone[i]->GetName() <<endl;
2156        i++;
2157    
2158        TList *li = fChain->GetListOfFriends();
2159        TIter next(li);
2160        TFriendElement* T_friend=0;
2161        ofile->cd();
2162        while( (T_friend = (TFriendElement*)next()) ){
2163    //      cout<<T_friend->IsA()->GetName()<<" "<<T_friend->GetName()<<hex << T_friend->GetTree() << dec<<endl;
2164    //      cout<<T_friend->GetTree()->GetName()<< endl;
2165            pam_tree_clone[i] = T_friend->GetTree()->CloneTree(0);
2166            pam_tree_clone[i]->SetAutoSave(1000000);
2167            name =  pam_tree_clone[i]->GetName();
2168            name.Append("_clone");
2169    //      pam_tree_clone[i]->SetName(name.Data());
2170            cout << pam_tree_clone[i]->GetName() << endl;
2171            i++;
2172        }
2173        
2174        delete li;
2175    
2176        cout << "+--+--+--+--+--+--+--+--+--+--+--+--+--+--+--+--+--+" <<endl;
2177    
2178    }
2179    
2180    /**
2181     * Create clone-trees
2182     */
2183    void PamLevel2::CreateCloneTrees(TFile *ofile){
2184    
2185        ofile->cd();
2186    
2187        cout << "+--+--+--+--+--+--+--+--+--+--+--+--+--+--+--+--+--+" <<endl;
2188        cout << "Create new PAMELA trees "<<endl;
2189            
2190    
2191        run_tree_clone = new TTree("Run","PAMELA Level2 data from the GL_RUN table ");
2192        run_tree_clone->Branch("RunInfo","GL_RUN",GetPointerTo("RunInfo"));
2193        cout << "Run          : branch RunInfo"<<endl;
2194        run_tree_clone->Branch("SoftInfo","SoftInfo",GetPointerTo("SoftInfo"));
2195        cout << "Run          : branch SoftInfo"<<endl;
2196                
2197    
2198    
2199        sel_tree_clone = new TTree("SelectionList","List of selected events ");
2200        sel_tree_clone->Branch("RunEntry",&irun,"runentry/I");
2201        sel_tree_clone->Branch("EventEntry",&irunentry,"eventry/I");
2202        
2203    
2204        Int_t i=0;
2205        if(TRK1||TRK2||TRKh){
2206            pam_tree_clone[i] = new TTree("Tracker","PAMELA tracker level2 data ");
2207            if(TRK1) {
2208                pam_tree_clone[i]->Branch("TrkLevel1","TrkLevel1", GetPointerTo("TrkLevel1"));
2209                pam_tree_clone[i]->BranchRef();
2210                cout << "Tracker      : branch TrkLevel1"<<endl;
2211            };
2212            if(TRK2) {
2213                pam_tree_clone[i]->Branch("TrkLevel2", "TrkLevel2",GetPointerTo("TrkLevel2"));
2214                cout << "Tracker      : branch TrkLevel2"<<endl;        
2215            };
2216            if(TRKh) {
2217                pam_tree_clone[i]->Branch("TrkHough","TrkHough", GetPointerTo("TrkHough"));
2218                cout << "Tracker      : branch TrkHough"<<endl;
2219            };
2220            i++;
2221        }
2222    
2223        // Calorimeter
2224        if(CAL1||CAL2){
2225            pam_tree_clone[i] = new TTree("Calorimeter","PAMELA calorimeter level2 data ");
2226            if(CAL1) {
2227                pam_tree_clone[i]->Branch("CaloLevel1", "CaloLevel1", GetPointerTo("CaloLevel1"));
2228                cout << "Calorimeter  : branch CaloLevel1"<<endl;
2229            };
2230            if(CAL2) {
2231                pam_tree_clone[i]->Branch("CaloLevel2","CaloLevel2", GetPointerTo("CaloLevel2"));
2232                cout << "Calorimeter  : branch CaloLevel2"<<endl;
2233            };
2234            i++;
2235        }    
2236    
2237        // ToF    
2238        if(TOF) {
2239            pam_tree_clone[i] = new TTree("ToF","PAMELA ToF level2 data ");
2240            pam_tree_clone[i]->Branch("ToFLevel2","ToFLevel2", GetPointerTo("ToFLevel2"));
2241            cout << "ToF          : branch ToFLevel2"<<endl;
2242            i++;
2243        };
2244        // Trigger
2245        if(TRG) {
2246            pam_tree_clone[i] = new TTree("Trigger","PAMELA trigger level2 data ");
2247            pam_tree_clone[i]->Branch("TrigLevel2","TrigLevel2", GetPointerTo("TrigLevel2"));
2248            cout << "Trigger      : branch TrigLevel2"<<endl;
2249            i++;
2250        };
2251        // S4
2252        if(S4) {
2253            pam_tree_clone[i] = new TTree("S4","PAMELA S4 level2 data ");  
2254            pam_tree_clone[i]->Branch("S4Level2","S4Level2", GetPointerTo("S4Level2"));
2255            cout << "S4           : branch S4Level2"<<endl;
2256            i++;
2257        };
2258        // Neutron Detector
2259        if(ND) {
2260            pam_tree_clone[i] = new TTree("NeutronD","PAMELA neutron detector level2 data ");      
2261            pam_tree_clone[i]->Branch("NDLevel2","NDLevel2", GetPointerTo("NDLevel2"));
2262            cout << "NeutronD     : branch NDLevel2"<<endl;
2263            i++;
2264        };
2265        // Anticounters
2266        if(AC) {
2267            pam_tree_clone[i] = new TTree("Anticounter","PAMELA anticounter detector level2 data ");        
2268            pam_tree_clone[i]->Branch("AcLevel2","AcLevel2", GetPointerTo("AcLevel2"));
2269            cout << "Anticounter  : branch AcLevel2"<<endl;
2270            i++;
2271        };
2272        // OrbitalInfo
2273        if(ORB) {
2274            pam_tree_clone[i] = new TTree("OrbitalInfo","PAMELA oribital info  ");  
2275            pam_tree_clone[i]->Branch("OrbitalInfo","OrbitalInfo", GetPointerTo("OrbitalInfo"));
2276            cout << "OrbitalInfo  : branch OrbitalInfo"<<endl;
2277            i++;
2278        };
2279        cout << "+--+--+--+--+--+--+--+--+--+--+--+--+--+--+--+--+--+" <<endl;
2280    
2281    }
2282    
2283    
2284    /**
2285     * Fill tree (created with CreateCloneTrees)
2286     *
2287     */
2288    //void PamLevel2::FillNewPamTree(TTree *T){
2289    void PamLevel2::FillCloneTrees(){
2290        
2291    //    cout << "PamLevel2::FillCloneTrees()" << irunentry << endl;
2292        for(Int_t i=0; i<NCLONES; i++){
2293            if(pam_tree_clone[i])pam_tree_clone[i]->Fill();
2294        }
2295        if(sel_tree_clone)sel_tree_clone->Fill();    
2296    //    if( irunentry == 0 || run_tree_clone->GetEntries()==0 )run_tree_clone->Fill();
2297        Int_t nstoredruns = run_tree_clone->GetEntries();
2298        if( irun ==  nstoredruns )run_tree_clone->Fill();
2299        else if( irun > nstoredruns || irun < nstoredruns-1){
2300            cout << " PamLevel2::FillCloneTrees() -- ERROR -- current run "<< irun <<" stored runs "<< nstoredruns <<endl;
2301        }
2302    }
2303    
2304    
2305    TTree* PamLevel2::GetCloneTree(TString name){
2306    
2307        for(Int_t i=0; i<NCLONES; i++){    
2308            if(pam_tree_clone[i]){
2309                TString na = pam_tree_clone[i]->GetName();
2310                if(!name.CompareTo(na))return pam_tree_clone[i];
2311            };
2312        }
2313        if(run_tree_clone){
2314            TString na = run_tree_clone->GetName();
2315            if(!name.CompareTo(na))return run_tree_clone;
2316        }
2317        if(sel_tree_clone){
2318            TString na = sel_tree_clone->GetName();
2319            if(!name.CompareTo(na))return sel_tree_clone;
2320        }
2321        return NULL;
2322    
2323    }
2324    void PamLevel2::WriteCloneTrees(){
2325        cout << "+--+--+--+--+--+--+--+--+--+--+--+--+--+--+--+--+--+" <<endl;
2326        cout << "Write clones of PAMELA trees "<<endl;
2327        cout << run_tree_clone->GetName()<<endl;    
2328        run_tree_clone->Write();
2329        cout << sel_tree_clone->GetName()<<endl;    
2330        sel_tree_clone->Write();
2331        for(Int_t i=0; i<NCLONES; i++){    
2332            if(pam_tree_clone[i]){
2333                cout << pam_tree_clone[i]->GetName()<<endl;
2334                pam_tree_clone[i]->Write();
2335            };
2336        }
2337        cout << "+--+--+--+--+--+--+--+--+--+--+--+--+--+--+--+--+--+" <<endl;
2338    
2339    }
2340    
2341    /**
2342     * Method to get both level2-trees entry and corresponding run entry.
2343     */
2344    
2345    
2346    Int_t PamLevel2::GetEntry(Int_t iee){
2347        
2348        if(!pam_tree){
2349            cout << " Int_t PamLevel2::GetEntry(Int_t) -- ERROR -- level2 trees not loeaded"<<endl;
2350            return 0;
2351        }
2352        if(!run_tree ){
2353            cout << " Int_t PamLevel2::GetEntry(Int_t) -- ERROR -- run tree not loeaded"<<endl;
2354            return 0;
2355        }
2356    
2357        Int_t ii=0;
2358        //-------------------------------
2359        ii = iee;
2360        if( !pam_tree->GetEntry(ii) ) return 0;
2361        //-------------------------------
2362        ii = iee;
2363        UpdateRunInfo(run_tree,ii);
2364        if(SELLI==0)irunentry = iee-runfirstentry;
2365    
2366    //    cout << "PamLevel2::GetEntry("<<iee<<") "<<irun<<" "<<runfirstentry<<" "<<irunentry<<endl;
2367    
2368        if( TRK0 || CAL0 || TOF0 )GetYodaEntry( );
2369    
2370        return 1;
2371    
2372    }
2373    
2374    /**
2375     * Method to retrieve the level0 tree (YODA tree) that contains the current event.
2376     * Given the run ID (...), if needed it query the DB and load the proper file.
2377     * @return Pointer to the tree
2378     */
2379    
2380    
2381    TTree* PamLevel2::GetYodaTree( ){
2382        
2383    //    cout << "TTree* PamLevel2::GetYodaTree( )"<<endl;
2384        //===================================
2385        // check if iroot has changed
2386        //===================================
2387        if( irun<0 ){
2388            cout << "PamLevel2::GetYodaTree() -- ERROR "<<endl;
2389            cout << "In order to use this method you have to load the RunInfo tree "<<endl;
2390            cout << "with the method TChain* PamLevel2::GetRunTree(TString, TString)"<<endl;
2391    //      cout << " - read the event with PamLevel2::GetEntry(Int_t)"<<endl;
2392            return NULL;
2393        }    
2394        Int_t irootnew = run_obj->ID_ROOT_L0;
2395    //    cout << "iroot    "<<iroot<<endl;
2396    //    cout << "irootnew "<<irootnew<<endl;
2397    
2398        //===================================
2399        // load the level0 file
2400        // (if not already loaded)
2401        //===================================
2402        if( iroot != irootnew || !l0_tree){
2403            iroot = irootnew;
2404            //===================================
2405            // open the DB connection
2406            // (if not already opened)
2407            //===================================
2408            if(!dbc || (dbc && !dbc->IsConnected())){
2409                cout<<"~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~"<<endl;
2410                cout<<"Connecting to DB"<<endl;
2411                cout<<"HOST "<<host<<endl;
2412                cout<<"USER "<<user<<endl;
2413                cout<<"PSW  "<<psw<<endl;
2414                dbc = TSQLServer::Connect(host.Data(),user.Data(),psw.Data());
2415                if( !dbc )return NULL;
2416                if( !dbc->IsConnected() )return NULL;    
2417    //          cout<<"...done"<<endl;
2418                cout<<"~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~"<<endl;
2419            }else{
2420    //          cout<<"DB already connected"<<endl;
2421            }
2422            GL_ROOT glroot = GL_ROOT();
2423            if( glroot.Query_GL_ROOT(iroot,dbc) )return NULL;
2424            TString filename = glroot.PATH + glroot.NAME;
2425            if(l0_file){
2426                l0_file->Close();
2427                l0_file->Delete();
2428            }
2429            cout << "Opening LEVEL0 file: "<< filename << endl;
2430            FileStat_t t;
2431            if( gSystem->GetPathInfo(filename.Data(),t) ){
2432                cout << " PamLevel2::GetYodaTree() -- ERROR opening file "<<endl;
2433                return NULL;
2434            }
2435            l0_file = new TFile(filename);
2436            if( !l0_file )return NULL;
2437            l0_tree = (TTree*)l0_file->Get("Physics");
2438            if(!h0_obj)h0_obj = new EventHeader();
2439            l0_tree->SetBranchAddress("Header" ,&h0_obj);
2440            //---------------------------------------------------
2441            // TRACKER:
2442            if(TRK0){
2443                if(!trk0_obj){
2444                    trk0_obj = new TrkLevel0();
2445                    trk0_obj->Set();
2446                };
2447                l0_tree->SetBranchAddress("Tracker" ,trk0_obj->GetPointerToTrackerEvent());
2448                TrkParams::SetCalib(run_obj,dbc);
2449            }
2450            //---------------------------------------------------
2451            // CALORIMETER:
2452            if(CAL0){
2453                cout << "PamLevel2::GetYodaTree() --- level0 calorimeter not implemented "<<endl;
2454            }
2455            //---------------------------------------------------
2456            // TOF:
2457            if(TOF0){
2458                cout << "PamLevel2::GetYodaTree() --- level0 TOF not implemented "<<endl;
2459            }
2460    
2461        };
2462    
2463        return l0_tree;
2464    
2465    }
2466    
2467    /**
2468     * Method to retrieve the level0 tree (YODA tree) that contains the current event.
2469     */
2470    Int_t PamLevel2::GetYodaEntry(){
2471    
2472    //    cout << "Int_t PamLevel2::GetYodaEntry()"<<endl;
2473        if(!GetYodaTree())return 0;
2474        
2475        //  ---------------------------------
2476        //  if file is NOT a preselected file
2477        //  ---------------------------------
2478        Int_t quellagiusta = irunentry + run_obj->EV_FROM;
2479        //  ------------------------------------------
2480        //  otherwise read the "preselected-list" tree
2481        //  ------------------------------------------
2482    
2483    //    cout << "LA ENTRY GIUSTA E`: "<<quellagiusta<<" (spero...)"<<endl;
2484        return GetYodaTree()->GetEntry(quellagiusta);
2485            
2486      return Tout;      return 1;
2487            
2488  }  }

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