--- PamelaLevel2/Makefile	2006/09/29 10:02:22	1.5
+++ PamelaLevel2/Makefile	2006/12/06 11:07:35	1.10
@@ -1,6 +1,6 @@
 # Calorimeter flight analysis software 
 # SOFTWARE VERSION
-VER= v0r01
+VER= v2r01
 # An almost general purpouse Makefile for PAMELA repository
 # Let's start with some usefull definition for colorize the echo 
 RED='\E[1;31;40m'
@@ -35,8 +35,8 @@
 #F77FLAGS=  -Wall -Wno-globals -fvxt -fno-automatic -fbounds-check -extend_source -static -fno-backslash
 # C++
 CXX=g++
-CXXFLAGS=-Wall -O -fPIC -pthread -g
-#CXXFLAGS=-Wall -O -fPIC -pthread
+#CXXFLAGS=-Wall -O -fPIC -pthread -g
+CXXFLAGS=-Wall -O -fPIC -pthread
 # ROOTCINT
 ROOTCINT=rootcint
 # Here the variables definig the local directories
@@ -118,19 +118,19 @@
 ${DIRLIB}/%.o: ${DIRSRC}/%.cpp
 	@(${EYELLOW} " C++ object ------------------------")
 	@(${EGREEN} "Creating object file: "${WHITE} "$@"; ${RESET})
-	@${CXX} ${CXXFLAGS} -c -o $@ ${DIRSRC}/`basename ${@} .o`.cpp -I${DIRINC} -I${PAM_INC} -I${PAM_YODA}/include/yoda/event   `root-config --cflags`
+	@${CXX} ${CXXFLAGS} -c -o $@ ${DIRSRC}/`basename ${@} .o`.cpp -I${DIRINC} -I${PAM_INC} -I${PAM_YODA}/include/yoda/  `root-config --cflags`
 
 ${DIRLIB}/%.o : ${DIRSRC}/F77/%.f
 	@(${EYELLOW} " F77 object ------------------------")
 	@(${EGREEN} "Creating object file: "${WHITE} "$@"; ${RESET})
-	@${F77} ${F77FLAGS} -c -o $@ ${DIRSRC}/F77/`basename ${@} .o`.f -I${DIRINC}/F77 -I${NROOTINC} -I${PAM_YODA}/include/yoda/event
+	@${F77} ${F77FLAGS} -c -o $@ ${DIRSRC}/F77/`basename ${@} .o`.f -I${DIRINC}/F77 -I${NROOTINC} -I${PAM_YODA}/include/yoda
 
  
 # .so from .o fortran
 ${LIBF77LIBS}: ${LIBF77OBJS}
 	@(${EYELLOW} " F77 shared library --------------------------")
 	@(${EGREEN} "Creating library: "${WHITE} "$@"; ${RESET})
-	@${CXX} ${CXXFLAGS} -Xlinker -soname=$(@F) -shared -o $@ $^ -lg2c `cernlib mathlib`
+	@${CXX} ${CXXFLAGS} -Xlinker -soname=$(@F) -shared -o $@ $^ -lg2c `doc/cernlib_pam mathlib`
 
 
 ${LIBROOTLIBS}: ${LIBROOTSRCS} ${FOBJS}
@@ -139,19 +139,19 @@
 #
 #	Create *Dict.cpp and *Dict.h
 #
-	@${ROOTCINT} -f ${DIRSRC}/`basename $(@F) _${VER}.so | sed s/lib//`Dict.cpp -c -I${ROOTINC} -I${PAM_YODA}/include/yoda/event  -I${PAM_INC} ${DIRINC}/`basename $(@F) _${VER}.so | sed s/lib//`.h  ${DIRINC}/`basename $(@F) _${VER}.so | sed s/lib//`LinkDef.h 
+	@${ROOTCINT} -f ${DIRSRC}/`basename $(@F) _${VER}.so | sed s/lib//`Dict.cpp -c -I${ROOTINC} -I${PAM_YODA}/include/yoda/ -I${PAM_INC} ${DIRINC}/`basename $(@F) _${VER}.so | sed s/lib//`.h  ${DIRINC}/`basename $(@F) _${VER}.so | sed s/lib//`LinkDef.h 
 #
 #	create .o 
 #
 	@(${EGREEN} "Compiling file: "${WHITE} "`basename $(@F) _${VER}.so | sed s/lib//`.cpp"; ${RESET})
-	@cd ${DIRSRC} &>/dev/null && ${CXX} ${CXXFLAGS} -c `basename $(@F) _${VER}.so | sed s/lib//`.cpp -I${DIRTOP}/${DIRINC} -I${DIRTOP}  -I${PAM_INC} -I${PAM_YODA}/include/yoda/event -I${NROOTINC}; 
+	@cd ${DIRSRC} &>/dev/null && ${CXX} ${CXXFLAGS} -c `basename $(@F) _${VER}.so | sed s/lib//`.cpp -I${DIRTOP}/${DIRINC} -I${DIRTOP}  -I${PAM_INC} -I${PAM_YODA}/include/yoda/ -I${NROOTINC}; 
 	@(${EGREEN} "Compiling file: "${WHITE} "`basename $(@F) _${VER}.so | sed s/lib//`Dict.cpp"; ${RESET})
-	@cd ${DIRSRC} &>/dev/null && ${CXX} ${CXXFLAGS} -c `basename $(@F) _${VER}.so | sed s/lib//`Dict.cpp -I${DIRTOP}/${DIRINC} -I${DIRTOP} -I${PAM_INC} -I${PAM_YODA}/include/yoda/event -I${NROOTINC}; 
+	@cd ${DIRSRC} &>/dev/null && ${CXX} ${CXXFLAGS} -c `basename $(@F) _${VER}.so | sed s/lib//`Dict.cpp -I${DIRTOP}/${DIRINC} -I${DIRTOP} -I${PAM_INC} -I${PAM_YODA}/include/yoda/ -I${NROOTINC}; 
 #
 #	create .so
 #
 	@(${EGREEN} "Compiling shared library: "${WHITE} "$@"; ${RESET})
-	@${CXX} ${CXXFLAGS} -Xlinker -soname=$(@F) -shared -o $@ -lg2c -I${DIRTOP}/${DIRINC} -I${DIRTOP} -I${PAM_YODA}/include/yoda/event -I${PAM_INC} ${DIRTOP}/${DIRSRC}/`basename $(@F) _${VER}.so | sed s/lib//`.o ${DIRTOP}/${DIRSRC}/`basename $(@F) _${VER}.so | sed s/lib//`Dict.o ${LIBROOTOBJS} `cernlib mathlib` 1>/dev/null	 
+	@${CXX} ${CXXFLAGS} -Xlinker -soname=$(@F) -shared -o $@ -lg2c -I${DIRTOP}/${DIRINC} -I${DIRTOP} -I${PAM_YODA}/include/yoda -I${PAM_INC} ${DIRTOP}/${DIRSRC}/`basename $(@F) _${VER}.so | sed s/lib//`.o ${DIRTOP}/${DIRSRC}/`basename $(@F) _${VER}.so | sed s/lib//`Dict.o ${LIBROOTOBJS} `doc/cernlib_pam mathlib` 1>/dev/null	 
 #	@ln -sf  ${DIRTOP}/${DIRLIB}/$(@F) ${DIRTOP}/${DIRLIB}/$(patsubst %_${VER}.so,%.so,$(@F))
 
 ${LIBCPPLIBS}: ${LIBCPPSRCS}
@@ -159,18 +159,18 @@
 #	create .o 
 #
 	@(${EGREEN} "Compiling file: "${WHITE} "`basename $(@F) _${VER}.so | sed s/lib//`.cpp"; ${RESET})
-	@cd ${DIRSRC} &>/dev/null && ${CXX} ${CXXFLAGS} -c `basename $(@F) _${VER}.so | sed s/lib//`.cpp -I${DIRTOP}/${DIRINC} -I${DIRTOP} -I${PAM_YODA}/include/yoda/event -I${NROOTINC} -I${PAM_INC} ; 
+	@cd ${DIRSRC} &>/dev/null && ${CXX} ${CXXFLAGS} -c `basename $(@F) _${VER}.so | sed s/lib//`.cpp -I${DIRTOP}/${DIRINC} -I${DIRTOP} -I${PAM_YODA}/include/yoda/ -I${NROOTINC} -I${PAM_INC} ; 
 #
 #	create .so
 #
 	@(${EGREEN} "Compiling shared library: "${WHITE} "$@"; ${RESET})
-	@${CXX} ${CXXFLAGS} -Xlinker -soname=$(@F) -shared -o $@ -lg2c -I${DIRTOP}/${DIRINC} -I${DIRTOP} -I${PAM_YODA}/include/yoda/event -I${PAM_INC} ${DIRTOP}/${DIRSRC}/`basename $(@F) _${VER}.so | sed s/lib//`.o 1>/dev/null
+	@${CXX} ${CXXFLAGS} -Xlinker -soname=$(@F) -shared -o $@ -lg2c -I${DIRTOP}/${DIRINC} -I${DIRTOP} -I${PAM_YODA}/include/yoda/ -I${PAM_INC} ${DIRTOP}/${DIRSRC}/`basename $(@F) _${VER}.so | sed s/lib//`.o 1>/dev/null
 
 
 ${CXXEXELIBS}: ${COBJS} ${FOBJS} ${CXXEXEOBJS}
 	@(${EVIOLET} "* * * * * * * * * * * * * * * * * * * * * * * * * * * * * *")
 	@(${EGREEN} "Creating exec file: "${WHITE} "$@"; ${RESET})
-	@${CXX} ${CXXFLAGS} -o ${DIRBIN}/$@ ${DIRLIB}/$@.o -I${DIRTOP}/${DIRINC} -I${PAM_INC} -I${PAM_YODA}/include/yoda/event ${PAM_YODA}/lib/libyoda.so ${FOBJS} ${COBJS} ${FULLLIBS} ${OTHERLIBS} -lThread `root-config --cflags --glibs` `cernlib mathlib` ;
+	@${CXX} ${CXXFLAGS} -o ${DIRBIN}/$@ ${DIRLIB}/$@.o -I${DIRTOP}/${DIRINC} -I${PAM_INC} -I${PAM_YODA}/include/yoda/ ${PAM_YODA}/lib/libyoda.so ${FOBJS} ${COBJS} ${FULLLIBS} ${OTHERLIBS} -lThread `root-config --cflags --glibs` `doc/cernlib_pam mathlib` ;
 
 # A small target to check environmental variables
 %_env: