1 |
mocchiut |
1.1 |
// |
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// C/C++ headers |
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// |
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#include <fstream> |
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#include <string.h> |
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#include <iostream> |
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#include <cstring> |
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#include <stdio.h> |
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// |
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// ROOT headers |
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// |
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#include <TTree.h> |
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#include <TClassEdit.h> |
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#include <TObject.h> |
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#include <TList.h> |
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#include <TArrayL.h> |
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#include <TSystem.h> |
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#include <TSystemDirectory.h> |
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#include <TString.h> |
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#include <TFile.h> |
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#include <TClass.h> |
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#include <TSQLServer.h> |
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#include <TSQLRow.h> |
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#include <TSQLResult.h> |
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#include <TClonesArray.h> |
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#include <stdlib.h> |
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#include <math.h> |
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// |
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// YODA headers |
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// |
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#include <PamelaRun.h> |
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#include <RegistryEvent.h> |
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#include <PscuHeader.h> |
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#include <PscuEvent.h> |
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#include <EventHeader.h> |
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#include <RegistryEvent.h> |
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#include <CalibS4Event.h> |
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#include <physics/S4/S4Event.h> |
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//#include <yodaUtility.h> |
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// |
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// RunInfo header |
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// |
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#include <RunInfo.h> |
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#include <GLTables.h> |
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// |
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// This program headers |
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// |
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#include <S4Level2.h> |
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#include <S4Core.h> |
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#include <S4Verl2.h> |
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using namespace std; |
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// |
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// CORE ROUTINE |
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// |
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// |
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int S4Core(ULong64_t run, TFile *file, TSQLServer *dbc, Int_t S4argc, char *S4argv[]){ |
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Int_t i = 0; |
61 |
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// |
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TString processFolder = "S4Folder"; |
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// |
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// Set these to true to have a very verbose output. |
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Bool_t debug = false; |
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// |
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Bool_t verbose = false; |
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// |
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if ( S4argc > 0 ){ |
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i = 0; |
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while ( i < S4argc ){ |
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if ( !strcmp(S4argv[i],"-processFolder") ) { |
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if ( S4argc < i+1 ){ |
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throw -3; |
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}; |
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processFolder = (TString)S4argv[i+1]; |
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i++; |
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}; |
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if ( (!strcmp(S4argv[i],"--debug")) || (!strcmp(S4argv[i],"-g"))) { |
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verbose = true; |
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}; |
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if ( (!strcmp(S4argv[i],"--verbose")) || (!strcmp(S4argv[i],"-v"))) { |
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verbose = true; |
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}; |
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i++; |
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}; |
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}; |
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const char* outDir = gSystem->DirName(gSystem->DirName(file->GetPath())); |
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// Variables for level2 |
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// |
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TTree *S4tr = 0; |
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Long64_t nevents = 0LL; |
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// |
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// variables needed to reprocess data |
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// |
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TString S4version; |
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ItoRunInfo *runinfo = 0; |
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TArrayL *runlist = 0; |
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TTree *S4trclone = 0; |
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Bool_t reproc = false; |
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Bool_t reprocall = false; |
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UInt_t nobefrun = 0; |
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UInt_t noaftrun = 0; |
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UInt_t numbofrun = 0; |
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stringstream ftmpname; |
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TString fname; |
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Long64_t totfileentries = 0ULL; |
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Long64_t idRun = 0LL; |
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Double_t ParamFit0 = 0ULL; |
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Double_t ParamFit1 = 0ULL; |
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// |
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// variables needed to handle error signals |
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// |
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Int_t code = 0; |
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Int_t sgnl; |
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// |
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// S4 level2 classes |
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// |
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S4Level2 *s4 = new S4Level2(); |
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S4Level2 *s4clone = new S4Level2(); |
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// |
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// define variables for opening and reading level0 file |
124 |
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// |
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TFile *l0File = 0; |
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TTree *l0tr = 0; |
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TBranch *l0head = 0; |
128 |
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TBranch *l0registry = 0; |
129 |
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TBranch *l0S4 =0; |
130 |
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pamela::RegistryEvent *l0reg=0; |
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pamela::S4::S4Event *l0s4e = 0; |
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pamela::EventHeader *eh = 0; |
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// |
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// Define other basic variables |
135 |
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// |
136 |
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UInt_t procev = 0; |
137 |
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stringstream file2; |
138 |
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stringstream file3; |
139 |
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stringstream qy; |
140 |
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Int_t totevent = 0; |
141 |
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ULong64_t atime = 0ULL; |
142 |
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Int_t ei = 0; |
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Int_t re = 0; |
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// |
145 |
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// Working filename |
146 |
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// |
147 |
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TString outputfile; |
148 |
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stringstream name; |
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name.str(""); |
150 |
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name << outDir << "/"; |
151 |
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// |
152 |
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// temporary file and folder |
153 |
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// |
154 |
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TFile *tempfile = 0; |
155 |
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TTree *tempS4 = 0; |
156 |
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stringstream tempname; |
157 |
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stringstream S4folder; |
158 |
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tempname.str(""); |
159 |
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tempname << outDir; |
160 |
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tempname << "/" << processFolder.Data(); |
161 |
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S4folder.str(""); |
162 |
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S4folder << tempname.str().c_str(); |
163 |
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gSystem->MakeDirectory(S4folder.str().c_str()); |
164 |
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tempname << "/S4tree_run"; |
165 |
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tempname << run << ".root"; |
166 |
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// |
167 |
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// DB classes |
168 |
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// |
169 |
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GL_ROOT *glroot = new GL_ROOT(); |
170 |
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GL_S4_CALIB *glS4calib = new GL_S4_CALIB(); |
171 |
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// |
172 |
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// Let's start! |
173 |
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// |
174 |
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// As a first thing we must check what we have to do: if run = 0 we must process all events in the file has been passed |
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// if run != 0 we must process only that run but first we have to check if the tree MyDetector2 already exist in the file |
176 |
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// if it exists we are reprocessing data and we must delete that entries, if not we must create it. |
177 |
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// |
178 |
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if ( run == 0ULL ) reproc = true; |
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// |
180 |
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// |
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// Output file is "outputfile" |
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// |
183 |
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if ( !file->IsOpen() ){ |
184 |
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//printf(" S4 - ERROR: cannot open file for writing\n"); |
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throw -501; |
186 |
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}; |
187 |
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// |
188 |
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// Retrieve GL_RUN variables from the level2 file |
189 |
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// |
190 |
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S4version = S4Info(false); // we should decide how to handle versioning system |
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// |
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// create an interface to RunInfo called "runinfo" |
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// |
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runinfo = new ItoRunInfo(file); |
195 |
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// |
196 |
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// open "Run" tree in level2 file, if not existing return an error (sngl != 0) |
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// |
198 |
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sgnl = 0; |
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sgnl = runinfo->Update(run,"S4",S4version); |
200 |
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if ( sgnl ){ |
201 |
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//printf(" S4 - ERROR: RunInfo exited with non-zero status\n"); |
202 |
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code = sgnl; |
203 |
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goto closeandexit; |
204 |
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} else { |
205 |
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sgnl = 0; |
206 |
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}; |
207 |
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// |
208 |
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// number of events in the file BEFORE the first event of our run |
209 |
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// |
210 |
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nobefrun = runinfo->GetFirstEntry(); |
211 |
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// |
212 |
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// total number of events in the file |
213 |
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// |
214 |
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totfileentries = runinfo->GetFileEntries(); |
215 |
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// |
216 |
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// first file entry AFTER the last event of our run |
217 |
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// |
218 |
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noaftrun = runinfo->GetLastEntry() + 1; |
219 |
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// |
220 |
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// number of run to be processed |
221 |
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// |
222 |
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numbofrun = runinfo->GetNoRun(); |
223 |
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// |
224 |
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// Try to access the S4 tree in the file, if it exists we are reprocessing data if not we are processing a new run |
225 |
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// |
226 |
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S4trclone = (TTree*)file->Get("S4"); |
227 |
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// |
228 |
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if ( !S4trclone ){ |
229 |
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// |
230 |
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// tree does not exist, we are not reprocessing |
231 |
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// |
232 |
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reproc = false; |
233 |
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if ( run == 0ULL ){ |
234 |
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if (verbose) printf(" S4 - WARNING: you are reprocessing data but S4 tree does not exist!\n"); |
235 |
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} |
236 |
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if ( runinfo->IsReprocessing() && run != 0ULL ) { |
237 |
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if (verbose) printf(" S4 - WARNING: it seems you are not reprocessing data but S4\n versioning information already exists in RunInfo.\n"); |
238 |
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} |
239 |
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} else { |
240 |
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// |
241 |
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// tree exists, we are reprocessing data. Are we reprocessing a single run or all the file? |
242 |
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// |
243 |
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reproc = true; |
244 |
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// |
245 |
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// update versioning information |
246 |
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// |
247 |
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//sgnl = runinfo->Update(run, "S4",S4version); |
248 |
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if (verbose) printf("\n Preparing the pre-processing...\n"); |
249 |
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// |
250 |
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if ( run == 0ULL ){ |
251 |
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// |
252 |
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// we are reprocessing all the file |
253 |
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// if we are reprocessing everything we don't need to copy any old event and we can just work with the new tree and delete the old one immediately |
254 |
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// |
255 |
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reprocall = true; |
256 |
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// |
257 |
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if (verbose) printf("\n S4 - WARNING: Reprocessing all runs\n"); |
258 |
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// |
259 |
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} else { |
260 |
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// |
261 |
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// we are reprocessing a single run, we must copy to the new tree the events in the file which preceed the first event of the run |
262 |
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// |
263 |
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reprocall = false; |
264 |
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// |
265 |
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if (verbose) printf("\n S4 - WARNING: Reprocessing run number %llu \n",run); |
266 |
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// |
267 |
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// copying old tree to a new file |
268 |
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// |
269 |
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tempfile = new TFile(tempname.str().c_str(),"RECREATE"); |
270 |
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tempS4 = S4trclone->CloneTree(-1,"fast"); |
271 |
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tempS4->SetName("S4-old"); |
272 |
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tempfile->Write(); |
273 |
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tempfile->Close(); |
274 |
|
|
} |
275 |
|
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// |
276 |
|
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// Delete the old tree from old file and memory |
277 |
|
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// |
278 |
|
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S4trclone->Delete("all"); |
279 |
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// |
280 |
|
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if (verbose) printf(" ...done!\n"); |
281 |
|
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// |
282 |
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}; |
283 |
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// |
284 |
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// create mydetector tree mydect |
285 |
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// |
286 |
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file->cd(); |
287 |
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S4tr = new TTree("S4-new","PAMELA Level2 S4 data"); |
288 |
|
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S4tr->Branch("S4Level2","S4Level2",&s4); |
289 |
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// |
290 |
|
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if ( reproc && !reprocall ){ |
291 |
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// |
292 |
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// open new file and retrieve also tree informations |
293 |
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// |
294 |
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tempfile = new TFile(tempname.str().c_str(),"READ"); |
295 |
|
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S4trclone = (TTree*)tempfile->Get("S4-old"); |
296 |
|
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S4trclone->SetBranchAddress("S4Level2",&s4clone); |
297 |
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// |
298 |
|
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if ( nobefrun > 0 ){ |
299 |
|
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if (verbose){ |
300 |
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printf("\n Pre-processing: copying events from the old tree before the processed run\n"); |
301 |
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printf(" Copying %u events in the file which are before the beginning of the run %llu \n",nobefrun,run); |
302 |
|
|
printf(" Start copying at event number 0, end copying at event number %u \n",nobefrun); |
303 |
|
|
} |
304 |
|
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for (UInt_t j = 0; j < nobefrun; j++){ |
305 |
|
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// |
306 |
|
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S4trclone->GetEntry(j); |
307 |
|
|
// |
308 |
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// copy s4clone to mydec |
309 |
|
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// |
310 |
|
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s4 = new S4Level2(); |
311 |
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memcpy(&s4,&s4clone,sizeof(s4clone)); |
312 |
|
|
// |
313 |
|
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// Fill entry in the new tree |
314 |
|
|
// |
315 |
|
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S4tr->Fill(); |
316 |
|
|
// |
317 |
|
|
}; |
318 |
|
|
if (verbose) printf(" Finished successful copying!\n"); |
319 |
|
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}; |
320 |
|
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}; |
321 |
|
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// |
322 |
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// Get the list of run to be processed, if only one run has to be processed the list will contain one entry only. |
323 |
|
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// |
324 |
|
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runlist = runinfo->GetRunList(); |
325 |
|
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// |
326 |
|
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// Loop over the run to be processed |
327 |
|
|
// |
328 |
|
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for (UInt_t irun=0; irun < numbofrun; irun++){ |
329 |
|
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// |
330 |
|
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// retrieve the first run ID to be processed using the RunInfo list |
331 |
|
|
// |
332 |
|
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idRun = runlist->At(irun); |
333 |
|
|
if (verbose){ |
334 |
|
|
printf("\n\n\n ####################################################################### \n"); |
335 |
|
|
printf(" PROCESSING RUN NUMBER %i \n",(int)idRun); |
336 |
|
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printf(" ####################################################################### \n\n\n"); |
337 |
|
|
} |
338 |
|
|
// |
339 |
|
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runinfo->ID_REG_RUN = 0ULL; |
340 |
|
|
// |
341 |
|
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// store in the runinfo class the GL_RUN variables for our run |
342 |
|
|
// |
343 |
|
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sgnl = 0; |
344 |
|
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sgnl = runinfo->GetRunInfo(idRun); |
345 |
|
|
if ( sgnl ){ |
346 |
|
|
//printf(" S4 - ERROR: RunInfo exited with non-zero status\n"); |
347 |
|
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code = sgnl; |
348 |
|
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goto closeandexit; |
349 |
|
|
} else { |
350 |
|
|
sgnl = 0; |
351 |
|
|
}; |
352 |
|
|
// |
353 |
|
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// now you can access that variables using the RunInfo class this way runinfo->ID_REG_RUN |
354 |
|
|
// |
355 |
|
|
if ( runinfo->ID_REG_RUN == 0 ){ |
356 |
|
|
//printf("\n S4 - ERROR: no run with ID_RUN = %i \n\n Exiting... \n\n",(int)idRun); |
357 |
|
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code = -5; |
358 |
|
|
goto closeandexit; |
359 |
|
|
}; |
360 |
|
|
// |
361 |
|
|
// Search in the DB the path and name of the LEVEL0 file to be processed. |
362 |
|
|
// |
363 |
|
|
glroot->Query_GL_ROOT(runinfo->ID_REG_RUN,dbc); |
364 |
|
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// |
365 |
|
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ftmpname.str(""); |
366 |
|
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ftmpname << glroot->PATH.Data() << "/"; |
367 |
|
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ftmpname << glroot->NAME.Data(); |
368 |
|
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fname = ftmpname.str().c_str(); |
369 |
|
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// |
370 |
|
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// print out informations |
371 |
|
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// |
372 |
|
|
totevent = runinfo->EV_REG_PHYS_TO - runinfo->EV_REG_PHYS_FROM + 1; |
373 |
|
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if (verbose){ |
374 |
|
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printf("\n LEVEL0 data file: %s \n",fname.Data()); |
375 |
|
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printf(" RUN HEADER absolute time is: %llu \n",runinfo->RUNHEADER_TIME); |
376 |
|
|
printf(" RUN TRAILER absolute time is: %llu \n",runinfo->RUNTRAILER_TIME); |
377 |
|
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printf(" %i events to be processed for run %llu: from %i to %i (reg entries)\n\n",totevent,idRun,runinfo->EV_REG_PHYS_FROM,runinfo->EV_REG_PHYS_TO); |
378 |
|
|
} |
379 |
|
|
// |
380 |
|
|
// Open Level0 file |
381 |
|
|
// |
382 |
|
|
l0File = new TFile(fname.Data()); |
383 |
|
|
if ( !l0File ) { |
384 |
|
|
//printf(" S4 - ERROR: problems opening Level0 file\n"); |
385 |
|
|
code = -6; |
386 |
|
|
goto closeandexit; |
387 |
|
|
}; |
388 |
|
|
l0tr = (TTree*)l0File->Get("Physics"); |
389 |
|
|
if ( !l0tr ) { |
390 |
|
|
//printf(" S4 - ERROR: no Physics tree in Level0 file\n"); |
391 |
|
|
l0File->Close(); |
392 |
|
|
code = -7; |
393 |
|
|
goto closeandexit; |
394 |
|
|
}; |
395 |
|
|
l0head = l0tr->GetBranch("Header"); |
396 |
|
|
if ( !l0head ) { |
397 |
|
|
//printf(" S4 - ERROR: no Header branch in Level0 tree\n"); |
398 |
|
|
l0File->Close(); |
399 |
|
|
code = -8; |
400 |
|
|
goto closeandexit; |
401 |
|
|
}; |
402 |
|
|
l0registry = l0tr->GetBranch("Registry"); |
403 |
|
|
if ( !l0registry ) { |
404 |
|
|
//printf(" S4 - ERROR: no Registry branch in Level0 tree\n"); |
405 |
|
|
l0File->Close(); |
406 |
|
|
code = -9; |
407 |
|
|
goto closeandexit; |
408 |
|
|
}; |
409 |
|
|
l0S4 = l0tr->GetBranch("S4"); |
410 |
|
|
if ( !l0S4 ) { |
411 |
|
|
//printf(" S4 - ERROR: no S4 branch in Level0 tree\n"); |
412 |
|
|
l0File->Close(); |
413 |
|
|
code = -503; |
414 |
|
|
goto closeandexit; |
415 |
|
|
}; |
416 |
|
|
|
417 |
|
|
// |
418 |
|
|
l0tr->SetBranchAddress("Registry", &l0reg); |
419 |
|
|
l0tr->SetBranchAddress("S4", &l0s4e); |
420 |
|
|
l0tr->SetBranchAddress("Header", &eh); |
421 |
|
|
// |
422 |
|
|
nevents = l0registry->GetEntries(); |
423 |
|
|
// |
424 |
|
|
if ( nevents < 1 ) { |
425 |
|
|
//printf(" S4 - ERROR: Level0 file is empty\n\n"); |
426 |
|
|
l0File->Close(); |
427 |
|
|
code = -11; |
428 |
|
|
goto closeandexit; |
429 |
|
|
}; |
430 |
|
|
// |
431 |
|
|
if ( runinfo->EV_REG_PHYS_TO > nevents-1 ) { |
432 |
|
|
//printf(" S4 - ERROR: too few entries in the registry tree\n"); |
433 |
|
|
l0File->Close(); |
434 |
|
|
code = -12; |
435 |
|
|
goto closeandexit; |
436 |
|
|
}; |
437 |
|
|
// |
438 |
|
|
// Check if we have to load parameter files (or calibration associated to runs and not to events) |
439 |
|
|
// second query: which is the value of paramfit relative to the calibration? |
440 |
|
|
// |
441 |
|
|
glS4calib->Query_GL_S4_CALIB(runinfo->RUNHEADER_TIME, dbc); |
442 |
|
|
ParamFit0 = glS4calib->PARAM_FIT0; |
443 |
|
|
ParamFit1 = glS4calib->PARAM_FIT1; |
444 |
|
|
// |
445 |
|
|
// run over all the events of the run |
446 |
|
|
// |
447 |
|
|
if (verbose) printf("\n Ready to start! \n\n Processed events: \n\n"); |
448 |
|
|
// |
449 |
|
|
for ( re = runinfo->EV_REG_PHYS_FROM; re <= runinfo->EV_REG_PHYS_TO; re++){ |
450 |
|
|
// |
451 |
|
|
if ( procev%1000 == 0 && procev > 0 && verbose ) printf(" %iK \n",procev/1000); |
452 |
|
|
// |
453 |
|
|
l0registry->GetEntry(re); |
454 |
|
|
// |
455 |
|
|
// absolute time of this event |
456 |
|
|
// |
457 |
|
|
atime = l0reg->absTime; |
458 |
|
|
// |
459 |
|
|
// physics events is at entry number ei where |
460 |
|
|
// |
461 |
|
|
ei = l0reg->event; |
462 |
|
|
// |
463 |
|
|
// paranoid check |
464 |
|
|
// |
465 |
|
|
if ( (atime > runinfo->RUNTRAILER_TIME) || (atime < runinfo->RUNHEADER_TIME) ) { |
466 |
|
|
if (verbose) printf(" S4 - WARNING: event at time outside the run time window, skipping it\n"); |
467 |
|
|
goto jumpev; |
468 |
|
|
}; |
469 |
|
|
// |
470 |
|
|
procev++; |
471 |
|
|
// |
472 |
|
|
// start processing |
473 |
|
|
// |
474 |
|
|
s4 = new S4Level2(); |
475 |
|
|
l0S4->GetEntry(ei); |
476 |
|
|
if (l0s4e->unpackError == 1) continue; |
477 |
|
|
s4->S4adc = l0s4e->S4_DATA; |
478 |
|
|
if ((l0s4e->S4_DATA) > 31 ){ |
479 |
|
|
s4->S4calibrated = ParamFit0*((l0s4e->S4_DATA)-32)+ParamFit1; |
480 |
|
|
}else{ |
481 |
|
|
s4->S4calibrated = 0; |
482 |
|
|
} |
483 |
|
|
S4tr->Fill(); |
484 |
|
|
// |
485 |
|
|
// |
486 |
|
|
jumpev: |
487 |
|
|
debug = false; |
488 |
|
|
// |
489 |
|
|
}; |
490 |
|
|
// |
491 |
|
|
// Here you may want to clear some variables before processing another run |
492 |
|
|
// |
493 |
|
|
ei = 0; |
494 |
|
|
}; // process all the runs |
495 |
|
|
// |
496 |
|
|
if (verbose) printf("\n Finished processing data \n"); |
497 |
|
|
// |
498 |
|
|
closeandexit: |
499 |
|
|
// |
500 |
|
|
// we have finished processing the run(s). If we processed a single run now we must copy all the events after our run from the old tree to the new one and delete the old tree. |
501 |
|
|
// |
502 |
|
|
if ( !reprocall && reproc && code >= 0 ){ |
503 |
|
|
if ( totfileentries > noaftrun ){ |
504 |
|
|
if (verbose){ |
505 |
|
|
printf("\n Post-processing: copying events from the old tree after the processed run\n"); |
506 |
|
|
printf(" Copying %i events in the file which are after the end of the run %i \n",(int)(totfileentries-noaftrun),(int)run); |
507 |
|
|
printf(" Start copying at event number %i end copying at event number %i \n",(int)noaftrun,(int)totfileentries); |
508 |
|
|
} |
509 |
|
|
for (UInt_t j = noaftrun; j < totfileentries; j++ ){ |
510 |
|
|
// |
511 |
|
|
// Get entry from old tree |
512 |
|
|
// |
513 |
|
|
S4trclone->GetEntry(j); |
514 |
|
|
// |
515 |
|
|
// copy s4clone to s4 |
516 |
|
|
// |
517 |
|
|
s4 = new S4Level2(); |
518 |
|
|
memcpy(&s4,&s4clone,sizeof(s4clone)); |
519 |
|
|
// |
520 |
|
|
// Fill entry in the new tree |
521 |
|
|
// |
522 |
|
|
S4tr->Fill(); |
523 |
|
|
}; |
524 |
|
|
if (verbose) printf(" Finished successful copying!\n"); |
525 |
|
|
}; |
526 |
|
|
}; |
527 |
|
|
// |
528 |
|
|
// Close files, delete old tree(s), write and close level2 file |
529 |
|
|
// |
530 |
|
|
if ( l0File ) l0File->Close(); |
531 |
|
|
if ( tempfile ) tempfile->Close(); |
532 |
|
|
gSystem->Unlink(tempname.str().c_str()); |
533 |
|
|
|
534 |
|
|
//if ( code < 0 ) printf("\n S4 - ERROR: an error occurred, try to save anyway...\n"); |
535 |
|
|
//printf("\n Writing and closing rootple\n"); |
536 |
|
|
if ( runinfo ) runinfo->Close(); |
537 |
|
|
if ( S4tr ) S4tr->SetName("S4"); |
538 |
|
|
if ( file ){ |
539 |
|
|
file->cd(); |
540 |
|
|
file->Write(); |
541 |
|
|
}; |
542 |
|
|
// |
543 |
|
|
gSystem->Unlink(S4folder.str().c_str()); |
544 |
|
|
// |
545 |
|
|
// the end |
546 |
|
|
// |
547 |
|
|
if (verbose) printf("\n Exiting...\n"); |
548 |
|
|
if(S4tr)S4tr->Delete(); |
549 |
|
|
if(code < 0) throw code; |
550 |
|
|
return(code); |
551 |
|
|
} |
552 |
|
|
|
553 |
|
|
|
554 |
|
|
|