/[PAMELA software]/DarthVader/OrbitalInfo/src/OrbitalInfoCore.cpp
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Diff of /DarthVader/OrbitalInfo/src/OrbitalInfoCore.cpp

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revision 1.45 by mocchiut, Fri Jan 29 20:45:52 2010 UTC revision 1.68 by mocchiut, Wed Feb 26 13:01:05 2014 UTC
# Line 9  Line 9 
9  // ROOT headers  // ROOT headers
10  //  //
11  //#include <TCanvas.h>  //#include <TCanvas.h>
12  //#include <TH2F.h> //for test only. Vitaly.  #include <TH2F.h> //for test only. Vitaly.
13    #include <TVector3.h>
14  //#include <TF1.h>  //#include <TF1.h>
15    
16  #include <TTree.h>  #include <TTree.h>
# Line 65  int OrbitalInfoCore(UInt_t run, TFile *f Line 66  int OrbitalInfoCore(UInt_t run, TFile *f
66    stringstream myquery;    stringstream myquery;
67    myquery.str("");    myquery.str("");
68    myquery << "SET time_zone='+0:00'";    myquery << "SET time_zone='+0:00'";
69    dbc->Query(myquery.str().c_str());    delete dbc->Query(myquery.str().c_str());
70    //    //
71    TString processFolder = Form("OrbitalInfoFolder_%u",run);    TString processFolder = Form("OrbitalInfoFolder_%u",run);
72    //    //
# Line 121  int OrbitalInfoCore(UInt_t run, TFile *f Line 122  int OrbitalInfoCore(UInt_t run, TFile *f
122    TTree *OrbitalInfotrclone = 0;    TTree *OrbitalInfotrclone = 0;
123    Bool_t reproc = false;    Bool_t reproc = false;
124    Bool_t reprocall = false;    Bool_t reprocall = false;
125      Bool_t igrfloaded = false;
126    UInt_t nobefrun = 0;    UInt_t nobefrun = 0;
127    UInt_t noaftrun = 0;    UInt_t noaftrun = 0;
128    UInt_t numbofrun = 0;    UInt_t numbofrun = 0;
# Line 128  int OrbitalInfoCore(UInt_t run, TFile *f Line 130  int OrbitalInfoCore(UInt_t run, TFile *f
130    TString fname;    TString fname;
131    UInt_t totfileentries = 0;    UInt_t totfileentries = 0;
132    UInt_t idRun = 0;    UInt_t idRun = 0;
133      UInt_t anni5 = 60 * 60 * 24 * 365 * 5 ;//1576800
134    //    //
135    // My variables. Vitaly.    // My variables. Vitaly.
136    //    //
# Line 180  int OrbitalInfoCore(UInt_t run, TFile *f Line 183  int OrbitalInfoCore(UInt_t run, TFile *f
183    //    //
184    // IGRF stuff    // IGRF stuff
185    //    //
186    Float_t dimo = 0.0; // dipole moment (computed from dat files)    Double_t dimo = 0.0; // dipole moment (computed from dat files) // EM GCC 4.7
187    Float_t bnorth, beast, bdown, babs;    Float_t bnorth, beast, bdown, babs;
188    Float_t xl; // L value    Float_t xl; // L value
189    Float_t icode; // code value for L accuracy (see fortran code)    Float_t icode; // code value for L accuracy (see fortran code)
# Line 223  int OrbitalInfoCore(UInt_t run, TFile *f Line 226  int OrbitalInfoCore(UInt_t run, TFile *f
226    //    //
227    //Quaternions classes    //Quaternions classes
228    //    //
229    Quaternions *L_QQ_Q_l_lower = new Quaternions();    Quaternions *L_QQ_Q_l_lower = 0;
230    InclinationInfo *RYPang_lower = new InclinationInfo();    InclinationInfo *RYPang_lower = 0;
231    Quaternions *L_QQ_Q_l_upper = new Quaternions();    Quaternions *L_QQ_Q_l_upper = 0;
232    InclinationInfo *RYPang_upper = new InclinationInfo();    InclinationInfo *RYPang_upper = 0;
233        
234    cEci eCi;    cEci eCi;
235        
236    // Initialize fortran routines!!!    // Initialize fortran routines!!!
237      Int_t ltp1 = 0;
238    Int_t ltp2 = 0;    Int_t ltp2 = 0;
239    Int_t ltp3 = 0;    Int_t ltp3 = 0;
240    Int_t uno = 1;    //  Int_t uno = 1;
241    const char *niente = " ";    //  const char *niente = " ";
242    GL_PARAM *glparam = new GL_PARAM();    GL_PARAM *glparam = new GL_PARAM();
243    GL_PARAM *glparam2 = new GL_PARAM();    GL_PARAM *glparam2 = new GL_PARAM();
244      GL_PARAM *glparam3 = new GL_PARAM();
245    
246    //    //
247    // Orientation variables. Vitaly    // Orientation variables. Vitaly
# Line 244  int OrbitalInfoCore(UInt_t run, TFile *f Line 249  int OrbitalInfoCore(UInt_t run, TFile *f
249    UInt_t evfrom = 0;    UInt_t evfrom = 0;
250    UInt_t jumped = 0;    UInt_t jumped = 0;
251    Int_t itr = -1;        Int_t itr = -1;    
252    Double_t A1;    //  Double_t A1;
253    Double_t A2;    //  Double_t A2;
254    Double_t A3;    //  Double_t A3;
255    Double_t Px = 0;    Double_t Px = 0;
256    Double_t Py = 0;          Double_t Py = 0;      
257    Double_t Pz = 0;      Double_t Pz = 0;  
# Line 259  int OrbitalInfoCore(UInt_t run, TFile *f Line 264  int OrbitalInfoCore(UInt_t run, TFile *f
264    if ( verbose ) cout<<"Reading quaternions external file"<<endl;    if ( verbose ) cout<<"Reading quaternions external file"<<endl;
265    cout.setf(ios::fixed,ios::floatfield);      cout.setf(ios::fixed,ios::floatfield);  
266    /******Reading recovered quaternions...*********/    /******Reading recovered quaternions...*********/
   //cout<<"START reading recovered quaternions..."<<endl;  
267    vector<Double_t> recqtime;    vector<Double_t> recqtime;
268    vector<Float_t> recq0;    vector<Float_t> recq0;
269    vector<Float_t> recq1;    vector<Float_t> recq1;
# Line 271  int OrbitalInfoCore(UInt_t run, TFile *f Line 275  int OrbitalInfoCore(UInt_t run, TFile *f
275    if ( parerror<0 ) {    if ( parerror<0 ) {
276      code = parerror;      code = parerror;
277      goto closeandexit;      goto closeandexit;
278    };    }
   //cout<<"ifstream loaded..."<<endl;  
279    while(!in.eof()){    while(!in.eof()){
280      recqtime.resize(recqtime.size()+1);      recqtime.resize(recqtime.size()+1);
281      Int_t sizee = recqtime.size();      Int_t sizee = recqtime.size();
# Line 286  int OrbitalInfoCore(UInt_t run, TFile *f Line 289  int OrbitalInfoCore(UInt_t run, TFile *f
289      in>>recq2[sizee-1];      in>>recq2[sizee-1];
290      in>>recq3[sizee-1];      in>>recq3[sizee-1];
291      in>>Norm;      in>>Norm;
     //cout<<recqtime[sizee]<<endl;  
292    }    }
293    if ( verbose ) cout<<"We have read recovered data"<<endl;    if ( verbose ) cout<<"We have read recovered data"<<endl;
294    
295      // IGRF stuff moved inside run loop!  
296    
   parerror=glparam->Query_GL_PARAM(1,301,dbc); // parameters stored in DB in GL_PRAM table    
   if ( parerror<0 ) {  
     code = parerror;  
     goto closeandexit;  
   };  
   ltp2 = (Int_t)(glparam->PATH+glparam->NAME).Length();  
   if ( verbose ) printf(" Reading Earth's Magnetic Field parameter file: %s \n",(glparam->PATH+glparam->NAME).Data());  
   //  
   parerror=glparam2->Query_GL_PARAM(1,302,dbc); // parameters stored in DB in GL_PRAM table  
   if ( parerror<0 ) {  
     code = parerror;  
     goto closeandexit;  
   };  
   ltp3 = (Int_t)(glparam2->PATH+glparam2->NAME).Length();  
   if ( verbose ) printf(" Reading Earth's Magnetic Field parameter file: %s \n",(glparam2->PATH+glparam2->NAME).Data());  
   //  
   initize_((char *)niente,&uno,(char *)(glparam->PATH+glparam->NAME).Data(),&ltp2,(char *)(glparam2->PATH+glparam2->NAME).Data(),&ltp3);  
   //  
   // End IGRF stuff//  
   //  
297    for (Int_t ip=0;ip<nz;ip++){    for (Int_t ip=0;ip<nz;ip++){
298      zin[ip] = tof->GetZTOF(tof->GetToFPlaneID(ip));      zin[ip] = tof->GetZTOF(tof->GetToFPlaneID(ip));
299    };    };
# Line 416  int OrbitalInfoCore(UInt_t run, TFile *f Line 399  int OrbitalInfoCore(UInt_t run, TFile *f
399        //        //
400        reprocall = true;        reprocall = true;
401        //        //
402        if (verbose) printf("\n OrbitalInfo - WARNING: Reprocessing all runs\n");        if (verbose) printf("\n OrbitalInfo - WARNING: Reprocessing all runs\n Deleting old tree...\n");
403        //        //
404      } else {      } else {
405        //        //
# Line 434  int OrbitalInfoCore(UInt_t run, TFile *f Line 417  int OrbitalInfoCore(UInt_t run, TFile *f
417        tempOrbitalInfo = OrbitalInfotrclone->CloneTree(-1,"fast");        tempOrbitalInfo = OrbitalInfotrclone->CloneTree(-1,"fast");
418        tempOrbitalInfo->SetName("OrbitalInfo-old");        tempOrbitalInfo->SetName("OrbitalInfo-old");
419        tempfile->Write();        tempfile->Write();
420          tempOrbitalInfo->Delete();
421        tempfile->Close();          tempfile->Close();  
422      }      }
423      //      //
424      // Delete the old tree from old file and memory      // Delete the old tree from old file and memory
425      //      //
426        OrbitalInfotrclone->Clear();
427      OrbitalInfotrclone->Delete("all");      OrbitalInfotrclone->Delete("all");
428      //      //
429      if (verbose) printf(" ...done!\n");      if (verbose) printf(" ...done!\n");
# Line 484  int OrbitalInfoCore(UInt_t run, TFile *f Line 469  int OrbitalInfoCore(UInt_t run, TFile *f
469          //          //
470        };        };
471        if (verbose) printf(" Finished successful copying!\n");        if (verbose) printf(" Finished successful copying!\n");
472      };                };
473    };    };
474    //    //
475    //    //
# Line 495  int OrbitalInfoCore(UInt_t run, TFile *f Line 480  int OrbitalInfoCore(UInt_t run, TFile *f
480    // Loop over the run to be processed    // Loop over the run to be processed
481    //    //
482    for (UInt_t irun=0; irun < numbofrun; irun++){    for (UInt_t irun=0; irun < numbofrun; irun++){
483    
484        L_QQ_Q_l_lower = new Quaternions();
485        RYPang_lower = new InclinationInfo();
486        L_QQ_Q_l_upper = new Quaternions();
487        RYPang_upper = new InclinationInfo();
488    
489      //      //
490      // retrieve the first run ID to be processed using the RunInfo list      // retrieve the first run ID to be processed using the RunInfo list
491      //      //
# Line 557  int OrbitalInfoCore(UInt_t run, TFile *f Line 548  int OrbitalInfoCore(UInt_t run, TFile *f
548      //      //
549      //    if ( !totevent ) goto closeandexit;      //    if ( !totevent ) goto closeandexit;
550      // Open Level0 file      // Open Level0 file
551        if ( l0File ) l0File->Close();
552      l0File = new TFile(fname.Data());      l0File = new TFile(fname.Data());
553      if ( !l0File ) {      if ( !l0File ) {
554        if ( debug ) printf(" OrbitalInfo - ERROR: problems opening Level0 file\n");        if ( debug ) printf(" OrbitalInfo - ERROR: problems opening Level0 file\n");
# Line 595  int OrbitalInfoCore(UInt_t run, TFile *f Line 587  int OrbitalInfoCore(UInt_t run, TFile *f
587        code = -12;        code = -12;
588        goto closeandexit;        goto closeandexit;
589      };      };
590    
591        //
592        // open IGRF files and do it only once if we are processing a full level2 file
593        //
594        if ( !igrfloaded ){
595    
596          if ( l0head->GetEntry(runinfo->EV_FROM) > 0 ){
597            igrfloaded = true;
598            //
599            // absolute time of first event of the run (it should not matter a lot)
600            //
601            ph = eh->GetPscuHeader();
602            atime = dbtime->DBabsTime(ph->GetOrbitalTime());
603            
604            parerror=glparam->Query_GL_PARAM(atime-anni5,301,dbc); // parameters stored in DB in GL_PRAM table  
605            if ( parerror<0 ) {
606              code = parerror;
607              goto closeandexit;
608            }
609            ltp1 = (Int_t)(glparam->PATH+glparam->NAME).Length();
610            if ( verbose ) printf(" Reading Earth's Magnetic Field parameter file: %s \n",(glparam->PATH+glparam->NAME).Data());
611            //
612            parerror=glparam2->Query_GL_PARAM(atime,301,dbc); // parameters stored in DB in GL_PRAM table  
613            if ( parerror<0 ) {
614              code = parerror;
615              goto closeandexit;
616            }
617            ltp2 = (Int_t)(glparam2->PATH+glparam2->NAME).Length();
618            if ( verbose ) printf(" Reading Earth's Magnetic Field parameter file: %s \n",(glparam2->PATH+glparam2->NAME).Data());
619            //
620            parerror=glparam3->Query_GL_PARAM(atime,302,dbc); // parameters stored in DB in GL_PRAM table
621            if ( parerror<0 ) {
622              code = parerror;
623              goto closeandexit;
624            }
625            ltp3 = (Int_t)(glparam3->PATH+glparam3->NAME).Length();
626            if ( verbose ) printf(" Reading Earth's Magnetic Field parameter file: %s \n",(glparam3->PATH+glparam3->NAME).Data());
627            //
628            initize_((char *)(glparam->PATH+glparam->NAME).Data(),&ltp1,(char *)(glparam2->PATH+glparam2->NAME).Data(),&ltp2,(char *)(glparam3->PATH+glparam3->NAME).Data(),&ltp3);
629            //
630          }
631        }
632        //
633        // End IGRF stuff//
634        //
635    
636      //      //
637      //     TTree *tp = (TTree*)l0File->Get("RunHeader");      //     TTree *tp = (TTree*)l0File->Get("RunHeader");
638      //     tp->SetBranchAddress("Header", &eH);      //     tp->SetBranchAddress("Header", &eH);
# Line 717  int OrbitalInfoCore(UInt_t run, TFile *f Line 755  int OrbitalInfoCore(UInt_t run, TFile *f
755    
756  //    UInt_t mctren = 0;      //    UInt_t mctren = 0;    
757  //    UInt_t mcreen = 0;          //    UInt_t mcreen = 0;        
758      UInt_t numrec = 0;  //    UInt_t numrec = 0;
759      //      //
760      Double_t upperqtime = 0;      //    Double_t upperqtime = 0;
761      Double_t lowerqtime = 0;      Double_t lowerqtime = 0;
762            
763  //    Double_t incli = 0;      //    Double_t incli = 0;
764  //    oi = 0;      //    oi = 0;
765  //    UInt_t ooi = 0;      //    UInt_t ooi = 0;
766      //      //
767      // init quaternions information from mcmd-packets      // init quaternions information from mcmd-packets
768      //      //
769      Bool_t isf = true;      Bool_t isf = true;
770  //    Int_t fgh = 0;      //    Int_t fgh = 0;
771    
772      vector<Float_t> q0;      vector<Float_t> q0;
773      vector<Float_t> q1;      vector<Float_t> q1;
# Line 809  int OrbitalInfoCore(UInt_t run, TFile *f Line 847  int OrbitalInfoCore(UInt_t run, TFile *f
847          //          //
848          tof->Clear();          tof->Clear();
849          //          //
850          if ( ttof->GetEntry(itr) <= 0 ) throw -36;          if ( ttof->GetEntry(itr) <= 0 ){
851             if ( verbose ) printf(" problems with tof tree entries... entry = %i in Level2 file\n",itr);
852             if ( verbose ) printf(" nobefrun %u re %u evfrom %u jumped %u reprocall %i \n",nobefrun,re,evfrom,jumped,reprocall);
853             throw -36;
854            }
855          //          //
856        };        };
857        //        //
# Line 853  int OrbitalInfoCore(UInt_t run, TFile *f Line 895  int OrbitalInfoCore(UInt_t run, TFile *f
895              + (hour*3600.+min*60.+(float)sec)/(24.*3600.*365.);              + (hour*3600.+min*60.+(float)sec)/(24.*3600.*365.);
896            //            //
897            if ( debug ) printf(" %i compute magnetic dipole moment get dipole moment for year\n",procev);                  if ( debug ) printf(" %i compute magnetic dipole moment get dipole moment for year\n",procev);      
898              if ( debug ) printf(" %i jyear %f dimo %f \n",procev,jyear,dimo);      
899            feldcof_(&jyear, &dimo); // get dipole moment for year            feldcof_(&jyear, &dimo); // get dipole moment for year
900            if ( debug ) printf(" %i compute magnetic dipole moment end\n",procev);                  if ( debug ) printf(" %i compute magnetic dipole moment end\n",procev);      
901          } else {          } else {
# Line 873  int OrbitalInfoCore(UInt_t run, TFile *f Line 916  int OrbitalInfoCore(UInt_t run, TFile *f
916          // First event          // First event
917          //          //
918          isf = false;          isf = false;
919          upperqtime = atime;          //      upperqtime = atime;
920          lowerqtime = runinfo->RUNHEADER_TIME;          lowerqtime = runinfo->RUNHEADER_TIME;
921          for ( ik = 0; ik < neventsm; ik++){  //number of macrocommad packets          for ( ik = 0; ik < neventsm; ik++){  //number of macrocommad packets
922            if ( ch->GetEntry(ik) <= 0 ) throw -36;            if ( ch->GetEntry(ik) <= 0 ) throw -36;
923            tmpSize = mcmdev->Records->GetEntries();            tmpSize = mcmdev->Records->GetEntries();
924            numrec = tmpSize;            //      numrec = tmpSize;
925            for (Int_t j3 = 0;j3<tmpSize;j3++){  //number of subpackets            for (Int_t j3 = 0;j3<tmpSize;j3++){  //number of subpackets
926              if ( debug ) printf(" ik %i j3 %i eh eh eh \n",ik,j3);              if ( debug ) printf(" ik %i j3 %i eh eh eh \n",ik,j3);
927              mcmdrc = (pamela::McmdRecord*)mcmdev->Records->At(j3);              mcmdrc = (pamela::McmdRecord*)mcmdev->Records->At(j3);
928              if ( mcmdrc ){ // missing inclination bug [8RED 090116]              if ( mcmdrc ){ // missing inclination bug [8RED 090116]
929                  if ( debug ) printf(" pluto \n");
930                if ((int)mcmdrc->ID1 == 226 && mcmdrc->Mcmd_Block_crc_ok == 1){ //Check that it is Inclination Packet                if ((int)mcmdrc->ID1 == 226 && mcmdrc->Mcmd_Block_crc_ok == 1){ //Check that it is Inclination Packet
931                  L_QQ_Q_l_upper->fill(mcmdrc->McmdData);                  L_QQ_Q_l_upper->fill(mcmdrc->McmdData);
932                  for (UInt_t ui = 0; ui < 6; ui++){                  for (UInt_t ui = 0; ui < 6; ui++){
933                    if (ui>0){                    if (ui>0){
934                      if (L_QQ_Q_l_upper->time[ui]>L_QQ_Q_l_upper->time[0]){                      if (L_QQ_Q_l_upper->time[ui]>L_QQ_Q_l_upper->time[0]){
935                          if ( debug ) printf(" here1 %i \n",ui);
936                        Double_t u_time = dbtime->DBabsTime((UInt_t)(L_QQ_Q_l_upper->time[ui]*1000-DeltaOBT*1000));                        Double_t u_time = dbtime->DBabsTime((UInt_t)(L_QQ_Q_l_upper->time[ui]*1000-DeltaOBT*1000));
937                        Int_t recSize = recqtime.size();                        Int_t recSize = recqtime.size();
938                          if(lowerqtime > recqtime[recSize-1]){
939                            Int_t sizeqmcmd = qtime.size();
940                            inclresize(qtime,q0,q1,q2,q3,qmode,qRoll,qPitch,qYaw);
941                            qtime[sizeqmcmd]=u_time;
942                            q0[sizeqmcmd]=L_QQ_Q_l_upper->quat[ui][0];
943                            q1[sizeqmcmd]=L_QQ_Q_l_upper->quat[ui][1];
944                            q2[sizeqmcmd]=L_QQ_Q_l_upper->quat[ui][2];
945                            q3[sizeqmcmd]=L_QQ_Q_l_upper->quat[ui][3];
946                            qmode[sizeqmcmd]=holeq(lowerqtime,qtime[sizeqmcmd],L_QQ_Q_l_lower,L_QQ_Q_l_upper,ui);
947                            lowerqtime = u_time;
948                            orbits.getPosition((double) (u_time - gltle->GetFromTime())/60., &eCi);
949                            RYPang_upper->TransAngle(eCi.getPos().m_x,eCi.getPos().m_y,eCi.getPos().m_z,eCi.getVel().m_x,eCi.getVel().m_y,eCi.getVel().m_z,L_QQ_Q_l_upper->quat[ui][0],L_QQ_Q_l_upper->quat[ui][1],L_QQ_Q_l_upper->quat[ui][2],L_QQ_Q_l_upper->quat[ui][3]);
950                            qRoll[sizeqmcmd]=RYPang_upper->Kren;
951                            qYaw[sizeqmcmd]=RYPang_upper->Ryskanie;
952                            qPitch[sizeqmcmd]=RYPang_upper->Tangazh;
953                          }
954                        for(Int_t mu = nt;mu<recSize;mu++){                        for(Int_t mu = nt;mu<recSize;mu++){
955                          if(recqtime[mu]>lowerqtime && recqtime[mu]<u_time){                          if(recqtime[mu]>lowerqtime && recqtime[mu]<u_time){
956                            nt=mu;                            nt=mu;
# Line 927  int OrbitalInfoCore(UInt_t run, TFile *f Line 988  int OrbitalInfoCore(UInt_t run, TFile *f
988                        }                        }
989                      }                      }
990                    }else{                    }else{
991                        if ( debug ) printf(" here2 %i \n",ui);
992                      Double_t u_time = dbtime->DBabsTime((UInt_t)(L_QQ_Q_l_upper->time[0]*1000-DeltaOBT*1000));                      Double_t u_time = dbtime->DBabsTime((UInt_t)(L_QQ_Q_l_upper->time[0]*1000-DeltaOBT*1000));
993                      if(lowerqtime>u_time)nt=0;                      if(lowerqtime>u_time)nt=0;
994                      Int_t recSize = recqtime.size();                      Int_t recSize = recqtime.size();
995                        if(lowerqtime > recqtime[recSize-1]){
996                          Int_t sizeqmcmd = qtime.size();
997                          inclresize(qtime,q0,q1,q2,q3,qmode,qRoll,qPitch,qYaw);
998                          qtime[sizeqmcmd]=u_time;
999                          q0[sizeqmcmd]=L_QQ_Q_l_upper->quat[0][0];
1000                          q1[sizeqmcmd]=L_QQ_Q_l_upper->quat[0][1];
1001                          q2[sizeqmcmd]=L_QQ_Q_l_upper->quat[0][2];
1002                          q3[sizeqmcmd]=L_QQ_Q_l_upper->quat[0][3];
1003                          qmode[sizeqmcmd]=holeq(lowerqtime,qtime[sizeqmcmd],L_QQ_Q_l_lower,L_QQ_Q_l_upper,ui);
1004                          lowerqtime = u_time;
1005                          orbits.getPosition((double) (u_time - gltle->GetFromTime())/60., &eCi);
1006                          RYPang_upper->TransAngle(eCi.getPos().m_x,eCi.getPos().m_y,eCi.getPos().m_z,eCi.getVel().m_x,eCi.getVel().m_y,eCi.getVel().m_z,L_QQ_Q_l_upper->quat[0][0],L_QQ_Q_l_upper->quat[0][1],L_QQ_Q_l_upper->quat[0][2],L_QQ_Q_l_upper->quat[0][3]);
1007                          qRoll[sizeqmcmd]=RYPang_upper->Kren;
1008                          qYaw[sizeqmcmd]=RYPang_upper->Ryskanie;
1009                          qPitch[sizeqmcmd]=RYPang_upper->Tangazh;
1010                        }
1011                      for(Int_t mu = nt;mu<recSize;mu++){                      for(Int_t mu = nt;mu<recSize;mu++){
1012                        if(recqtime[mu]>lowerqtime && recqtime[mu]<u_time){                        if(recqtime[mu]>lowerqtime && recqtime[mu]<u_time){
1013                          nt=mu;                          nt=mu;
# Line 970  int OrbitalInfoCore(UInt_t run, TFile *f Line 1048  int OrbitalInfoCore(UInt_t run, TFile *f
1048                  }                  }
1049                }                }
1050              }              }
1051                if ( debug ) printf(" ciccio \n");
1052            }            }
1053          }          }
1054            
1055            if(qtime.size()==0){
1056              for(UInt_t my=0;my<recqtime.size();my++){
1057                Int_t sizeqmcmd = qtime.size();
1058                inclresize(qtime,q0,q1,q2,q3,qmode,qRoll,qPitch,qYaw);
1059                qtime[sizeqmcmd]=recqtime[my];
1060                q0[sizeqmcmd]=recq0[my];
1061                q1[sizeqmcmd]=recq1[my];
1062                q2[sizeqmcmd]=recq2[my];
1063                q3[sizeqmcmd]=recq3[my];
1064                qmode[sizeqmcmd]=-10;
1065                orbits.getPosition((double) (qtime[sizeqmcmd] - gltle->GetFromTime())/60., &eCi);
1066                RYPang_upper->TransAngle(eCi.getPos().m_x,eCi.getPos().m_y,eCi.getPos().m_z,eCi.getVel().m_x,eCi.getVel().m_y,eCi.getVel().m_z,recq0[my],recq1[my],recq2[my],recq3[my]);
1067                qRoll[sizeqmcmd]=RYPang_upper->Kren;
1068                qYaw[sizeqmcmd]=RYPang_upper->Ryskanie;
1069                qPitch[sizeqmcmd]=RYPang_upper->Tangazh;
1070              }
1071            }
1072            
1073            if ( debug ) printf(" fuffi \n");
1074    
1075          sineparam(q0sine,qtime,q0,qRoll,qPitch,0.58);          if ( debug ) printf(" puffi \n");
         sineparam(q1sine,qtime,q1,qRoll,qPitch,0.79);  
         sineparam(q2sine,qtime,q2,qRoll,qPitch,0.79);  
         sineparam(q3sine,qtime,q3,qRoll,qPitch,0.58);  
         sineparam(Yawsine,qtime,qYaw,qRoll,qPitch,4);  
1076          Double_t tmin = 9999999999.;          Double_t tmin = 9999999999.;
1077          Double_t tmax = 0.;          Double_t tmax = 0.;
1078          for(UInt_t tre = 0;tre<qtime.size();tre++){          for(UInt_t tre = 0;tre<qtime.size();tre++){
1079            if(qtime[tre]>tmax)tmax = qtime[tre];            if(qtime[tre]>tmax)tmax = qtime[tre];
1080            if(qtime[tre]<tmin)tmin = qtime[tre];            if(qtime[tre]<tmin)tmin = qtime[tre];
1081          }          }
1082                    if ( debug ) printf(" gnfuffi \n");
1083          //q0testing->SetName("q0testing");  
         //q1testing->SetName("q1testing");  
         //q2testing->SetName("q2testing");  
         //q3testing->SetName("q3testing");  
           
 //      Int_t ss=10.*(tmax-tmin);  
         //q0testing->SetBins(ss,tmin,tmax,1000,-1.,1.);  
         //Pitchtesting->SetBins(ss,tmin,tmax,1000,-40.,40.);  
   
 //      for(Int_t tre = 0;tre<qtime.size();tre++){  
           //cout<<"q0["<<tre<<" = "<<q0[tre]<<endl;  
           //q0testing->Fill(qtime[tre],q0[tre]);  
           //q1testing->Fill(qtime[tre],q1[tre]);  
           //Pitchtesting->Fill(qtime[tre],qPitch[tre],100);  
           //if(qmode[tre] == -10)Pitchtesting->Fill(qtime[tre],10,100);  
           //q2testing->Fill(qtime[tre],q2[tre],100);  
           //q3testing->Fill(qtime[tre],q3[tre],100);  
 //      }  
           
         //for(Int_t tre=0;tre<q0sine.size();tre++)cout<<q1sine[tre].A<<"*sin("<<q1sine[tre].b<<"x+"<<q1sine[tre].c<<")\t time start: "<<q1sine[tre].startPoint<<"\ttime end: "<<q1sine[tre].finishPoint<<endl;  
         //for(Int_t tre=0;tre<q0sine.size();tre++)cout<<q1sine[tre].A<<"*sin("<<q1sine[tre].b<<"x+"<<q1sine[tre].c<<")\t time start: "<<q0sine[tre].startPoint<<"\ttime end: "<<q0sine[tre].finishPoint<<endl;  
1084        } // if we processed first event        } // if we processed first event
1085    
1086                
1087        //Filling Inclination information        //Filling Inclination information
1088        Double_t incli = 0;        Double_t incli = 0;
1089        for(UInt_t mu = must;mu<qtime.size()-1;mu++){        if ( qtime.size() > 1 ){
1090          if(qtime[mu+1]>qtime[mu]){          for(UInt_t mu = must;mu<qtime.size()-1;mu++){
1091            if(atime<=qtime[mu+1] && atime>=qtime[mu]){            if ( debug ) printf(" ??grfuffi %i sixe %i must %i \n",mu,qtime.size()-1,must);
1092              must = mu;            if(qtime[mu+1]>qtime[mu]){
1093              incli = (qPitch[mu+1]-qPitch[mu])/(qtime[mu+1]-qtime[mu]);              if ( debug ) printf(" grfuffi2 %i \n",mu);
1094              orbitalinfo->theta =  incli*atime+qPitch[mu+1]-incli*qtime[mu+1];              if(atime<=qtime[mu+1] && atime>=qtime[mu]){
1095              incli = (qRoll[mu+1]-qRoll[mu])/(qtime[mu+1]-qtime[mu]);                must = mu;
1096              orbitalinfo->etha =  incli*atime+qRoll[mu+1]-incli*qtime[mu+1];                if ( debug ) printf(" grfuffi3 %i \n",mu);
1097              incli = (qYaw[mu+1]-qYaw[mu])/(qtime[mu+1]-qtime[mu]);                incli = (qPitch[mu+1]-qPitch[mu])/(qtime[mu+1]-qtime[mu]);
1098              orbitalinfo->phi =  incli*atime+qYaw[mu+1]-incli*qtime[mu+1];                orbitalinfo->theta =  incli*atime+qPitch[mu+1]-incli*qtime[mu+1];
1099                              incli = (qRoll[mu+1]-qRoll[mu])/(qtime[mu+1]-qtime[mu]);
1100              incli = (q0[mu+1]-q0[mu])/(qtime[mu+1]-qtime[mu]);                orbitalinfo->etha =  incli*atime+qRoll[mu+1]-incli*qtime[mu+1];
1101              orbitalinfo->q0t =  incli*atime+q0[mu+1]-incli*qtime[mu+1];                incli = (qYaw[mu+1]-qYaw[mu])/(qtime[mu+1]-qtime[mu]);
1102              incli = (q1[mu+1]-q1[mu])/(qtime[mu+1]-qtime[mu]);                orbitalinfo->phi =  incli*atime+qYaw[mu+1]-incli*qtime[mu+1];
1103              orbitalinfo->q1t =  incli*atime+q1[mu+1]-incli*qtime[mu+1];                
1104              incli = (q2[mu+1]-q2[mu])/(qtime[mu+1]-qtime[mu]);                incli = (q0[mu+1]-q0[mu])/(qtime[mu+1]-qtime[mu]);
1105              orbitalinfo->q2t =  incli*atime+q2[mu+1]-incli*qtime[mu+1];                orbitalinfo->q0 =  incli*atime+q0[mu+1]-incli*qtime[mu+1];
1106              incli = (q3[mu+1]-q3[mu])/(qtime[mu+1]-qtime[mu]);                incli = (q1[mu+1]-q1[mu])/(qtime[mu+1]-qtime[mu]);
1107              orbitalinfo->q3t =  incli*atime+q3[mu+1]-incli*qtime[mu+1];                orbitalinfo->q1 =  incli*atime+q1[mu+1]-incli*qtime[mu+1];
1108                              incli = (q2[mu+1]-q2[mu])/(qtime[mu+1]-qtime[mu]);
1109              orbitalinfo->TimeGap = qtime[mu+1]-qtime[mu];                orbitalinfo->q2 =  incli*atime+q2[mu+1]-incli*qtime[mu+1];
1110              orbitalinfo->mode = qmode[mu+1];                incli = (q3[mu+1]-q3[mu])/(qtime[mu+1]-qtime[mu]);
1111              if(qmode[mu+1]==-10) orbitalinfo->R10r = true;else orbitalinfo->R10r = false;                orbitalinfo->q3 =  incli*atime+q3[mu+1]-incli*qtime[mu+1];
1112              if(qmode[mu+1]==-10 || qmode[mu+1]==0 || qmode[mu+1]==1 || qmode[mu+1]==3 || qmode[mu+1]==4 || qmode[mu+1]==6){                
1113                  orbitalinfo->TimeGap = qtime[mu+1]-qtime[mu];
1114                  orbitalinfo->mode = qmode[mu+1];
1115                  //if(qmode[mu+1]==-10) orbitalinfo->R10r = true;else orbitalinfo->R10r = false;
1116                  //reserved for next versions Vitaly.
1117                  /*if(qmode[mu+1]==-10 || qmode[mu+1]==0 || qmode[mu+1]==1 || qmode[mu+1]==3 || qmode[mu+1]==4 || qmode[mu+1]==6){
1118                //linear interpolation                //linear interpolation
1119                incli = (q0[mu+1]-q0[mu])/(qtime[mu+1]-qtime[mu]);                incli = (q0[mu+1]-q0[mu])/(qtime[mu+1]-qtime[mu]);
1120                orbitalinfo->q0 =  incli*atime+q0[mu+1]-incli*qtime[mu+1];                orbitalinfo->q0 =  incli*atime+q0[mu+1]-incli*qtime[mu+1];
# Line 1043  int OrbitalInfoCore(UInt_t run, TFile *f Line 1124  int OrbitalInfoCore(UInt_t run, TFile *f
1124                orbitalinfo->q2 =  incli*atime+q2[mu+1]-incli*qtime[mu+1];                orbitalinfo->q2 =  incli*atime+q2[mu+1]-incli*qtime[mu+1];
1125                incli = (q3[mu+1]-q3[mu])/(qtime[mu+1]-qtime[mu]);                incli = (q3[mu+1]-q3[mu])/(qtime[mu+1]-qtime[mu]);
1126                orbitalinfo->q3 =  incli*atime+q3[mu+1]-incli*qtime[mu+1];                orbitalinfo->q3 =  incli*atime+q3[mu+1]-incli*qtime[mu+1];
1127              }else{                }else{
1128                //sine interpolation                //sine interpolation
1129                for(UInt_t mt=0;mt<q0sine.size();mt++){                for(UInt_t mt=0;mt<q0sine.size();mt++){
1130                  if(atime<=q0sine[mt].finishPoint && atime>=q0sine[mt].startPoint){                if(atime<=q0sine[mt].finishPoint && atime>=q0sine[mt].startPoint){
1131                    if(!q0sine[mt].NeedFit)orbitalinfo->q0=q0sine[mt].A*sin(q0sine[mt].b*atime+q0sine[mt].c);else{                if(!q0sine[mt].NeedFit)orbitalinfo->q0=q0sine[mt].A*sin(q0sine[mt].b*atime+q0sine[mt].c);else{
1132                      incli = (q0[mu+1]-q0[mu])/(qtime[mu+1]-qtime[mu]);                incli = (q0[mu+1]-q0[mu])/(qtime[mu+1]-qtime[mu]);
1133                      orbitalinfo->q0 =  incli*atime+q0[mu+1]-incli*qtime[mu+1];                orbitalinfo->q0 =  incli*atime+q0[mu+1]-incli*qtime[mu+1];
1134                    }                }
1135                  }                }
1136                  if(atime<=q1sine[mt].finishPoint && atime>=q1sine[mt].startPoint){                if(atime<=q1sine[mt].finishPoint && atime>=q1sine[mt].startPoint){
1137                    if(!q1sine[mt].NeedFit)orbitalinfo->q1=q1sine[mt].A*sin(q1sine[mt].b*atime+q1sine[mt].c);else{                if(!q1sine[mt].NeedFit)orbitalinfo->q1=q1sine[mt].A*sin(q1sine[mt].b*atime+q1sine[mt].c);else{
1138                      incli = (q1[mu+1]-q1[mu])/(qtime[mu+1]-qtime[mu]);                incli = (q1[mu+1]-q1[mu])/(qtime[mu+1]-qtime[mu]);
1139                      orbitalinfo->q1 =  incli*atime+q1[mu+1]-incli*qtime[mu+1];                orbitalinfo->q1 =  incli*atime+q1[mu+1]-incli*qtime[mu+1];
1140                    }                }
1141                  }                }
1142                  if(atime<=q2sine[mt].finishPoint && atime>=q2sine[mt].startPoint){                if(atime<=q2sine[mt].finishPoint && atime>=q2sine[mt].startPoint){
1143                    if(!q2sine[mt].NeedFit)orbitalinfo->q2=q0sine[mt].A*sin(q2sine[mt].b*atime+q2sine[mt].c);else{                if(!q2sine[mt].NeedFit)orbitalinfo->q2=q0sine[mt].A*sin(q2sine[mt].b*atime+q2sine[mt].c);else{
1144                      incli = (q2[mu+1]-q2[mu])/(qtime[mu+1]-qtime[mu]);                incli = (q2[mu+1]-q2[mu])/(qtime[mu+1]-qtime[mu]);
1145                      orbitalinfo->q2 =  incli*atime+q2[mu+1]-incli*qtime[mu+1];                orbitalinfo->q2 =  incli*atime+q2[mu+1]-incli*qtime[mu+1];
1146                    }                }
1147                  }                }
1148                  if(atime<=q3sine[mt].finishPoint && atime>=q3sine[mt].startPoint){                if(atime<=q3sine[mt].finishPoint && atime>=q3sine[mt].startPoint){
1149                    if(!q3sine[mt].NeedFit)orbitalinfo->q3=q0sine[mt].A*sin(q3sine[mt].b*atime+q3sine[mt].c);else{                if(!q3sine[mt].NeedFit)orbitalinfo->q3=q0sine[mt].A*sin(q3sine[mt].b*atime+q3sine[mt].c);else{
1150                      incli = (q3[mu+1]-q3[mu])/(qtime[mu+1]-qtime[mu]);                incli = (q3[mu+1]-q3[mu])/(qtime[mu+1]-qtime[mu]);
1151                      orbitalinfo->q3 =  incli*atime+q3[mu+1]-incli*qtime[mu+1];                orbitalinfo->q3 =  incli*atime+q3[mu+1]-incli*qtime[mu+1];
1152                    }                }
1153                  }                }
1154                  if(atime<=Yawsine[mt].finishPoint && atime>=Yawsine[mt].startPoint){                if(atime<=Yawsine[mt].finishPoint && atime>=Yawsine[mt].startPoint){
1155                    if(!Yawsine[mt].NeedFit)orbitalinfo->phi=Yawsine[mt].A*sin(Yawsine[mt].b*atime+Yawsine[mt].c);else{                if(!Yawsine[mt].NeedFit)orbitalinfo->phi=Yawsine[mt].A*sin(Yawsine[mt].b*atime+Yawsine[mt].c);else{
1156                      incli = (qYaw[mu+1]-qYaw[mu])/(qtime[mu+1]-qtime[mu]);                incli = (qYaw[mu+1]-qYaw[mu])/(qtime[mu+1]-qtime[mu]);
1157                      orbitalinfo->phi =  incli*atime+qYaw[mu+1]-incli*qtime[mu+1];                orbitalinfo->phi =  incli*atime+qYaw[mu+1]-incli*qtime[mu+1];
1158                    }                }
1159                  }                }
1160                }                }
1161              }                }*/
1162              //q0testing->Fill(atime,orbitalinfo->q0,100);                //q0testing->Fill(atime,orbitalinfo->q0,100);
1163              //q1testing->Fill(atime,orbitalinfo->q1,100);                //q1testing->Fill(atime,orbitalinfo->q1,100);
1164              //Pitchtesting->Fill(atime,orbitalinfo->etha);                //Pitchtesting->Fill(atime,orbitalinfo->etha);
1165              //q2testing->Fill(atime,orbitalinfo->q2);                //q2testing->Fill(atime,orbitalinfo->q2);
1166              //q3testing->Fill(atime,orbitalinfo->q3);                //q3testing->Fill(atime,orbitalinfo->q3);
1167              break;                if ( debug ) printf(" grfuffi4 %i \n",mu);
1168            }                break;
1169          }              }
1170              }
1171            }
1172        }        }
1173          if ( debug ) printf(" grfuffi5  \n");
1174        //        //
1175        // ops no inclination information        // ops no inclination information
1176        //        //
1177          
1178        if ( orbitalinfo->q0< -999 || orbitalinfo->q1 < -999 || orbitalinfo->q2 < -999 || orbitalinfo->q3 < -999 || orbitalinfo->q0 != orbitalinfo->q0 || orbitalinfo->q1 != orbitalinfo->q1 || orbitalinfo->q2 != orbitalinfo->q2 || orbitalinfo->q3 != orbitalinfo->q3 ){        if ( orbitalinfo->q0< -999 || orbitalinfo->q1 < -999 || orbitalinfo->q2 < -999 || orbitalinfo->q3 < -999 || orbitalinfo->q0 != orbitalinfo->q0 || orbitalinfo->q1 != orbitalinfo->q1 || orbitalinfo->q2 != orbitalinfo->q2 || orbitalinfo->q3 != orbitalinfo->q3 ){
1179          orbitalinfo->mode = 10;          orbitalinfo->mode = 10;
1180          orbitalinfo->q0 = -1000.;          orbitalinfo->q0 = -1000.;
# Line 1101  int OrbitalInfoCore(UInt_t run, TFile *f Line 1184  int OrbitalInfoCore(UInt_t run, TFile *f
1184          orbitalinfo->etha = -1000.;          orbitalinfo->etha = -1000.;
1185          orbitalinfo->phi = -1000.;          orbitalinfo->phi = -1000.;
1186          orbitalinfo->theta = -1000.;          orbitalinfo->theta = -1000.;
1187        };          if ( debug ) printf(" grfuffi6 \n");
1188          }
1189        //        //
1190          if ( debug ) printf(" filling \n");
1191        // #########################################################################################################################          // #########################################################################################################################  
1192        //        //
1193        // fill orbital positions        // fill orbital positions
# Line 1113  int OrbitalInfoCore(UInt_t run, TFile *f Line 1198  int OrbitalInfoCore(UInt_t run, TFile *f
1198        lon = (coo.m_Lon > M_PI) ? rad2deg(coo.m_Lon - 2*M_PI) : rad2deg(coo.m_Lon);        lon = (coo.m_Lon > M_PI) ? rad2deg(coo.m_Lon - 2*M_PI) : rad2deg(coo.m_Lon);
1199        lat = rad2deg(coo.m_Lat);        lat = rad2deg(coo.m_Lat);
1200        alt = coo.m_Alt;        alt = coo.m_Alt;
1201          if ( debug ) printf(" coord done \n");
1202        //        //
1203        if( lon<180 && lon>-180 && lat<90 && lat>-90 && alt>0 ){          if( lon<180 && lon>-180 && lat<90 && lat>-90 && alt>0 ){  
1204          //                //      
# Line 1122  int OrbitalInfoCore(UInt_t run, TFile *f Line 1208  int OrbitalInfoCore(UInt_t run, TFile *f
1208          //          //
1209          // compute mag field components and L shell.          // compute mag field components and L shell.
1210          //          //
1211            if ( debug ) printf(" call igrf feldg \n");
1212          feldg_(&lat, &lon, &alt, &bnorth, &beast, &bdown, &babs);          feldg_(&lat, &lon, &alt, &bnorth, &beast, &bdown, &babs);
1213            if ( debug ) printf(" call igrf shellg \n");
1214          shellg_(&lat, &lon, &alt, &dimo, &xl, &icode, &bab1);          shellg_(&lat, &lon, &alt, &dimo, &xl, &icode, &bab1);
1215            if ( debug ) printf(" call igrf findb \n");
1216          findb0_(&stps, &bdel, &value, &bequ, &rr0);          findb0_(&stps, &bdel, &value, &bequ, &rr0);
1217          //          //
1218            if ( debug ) printf(" done igrf \n");
1219          orbitalinfo->Bnorth = bnorth;          orbitalinfo->Bnorth = bnorth;
1220          orbitalinfo->Beast = beast;          orbitalinfo->Beast = beast;
1221          orbitalinfo->Bdown = bdown;          orbitalinfo->Bdown = bdown;
1222          orbitalinfo->Babs = babs;          orbitalinfo->Babs = babs;
1223            orbitalinfo->M = dimo;
1224          orbitalinfo->BB0 = babs/bequ;          orbitalinfo->BB0 = babs/bequ;
1225          orbitalinfo->L = xl;                orbitalinfo->L = xl;      
1226          // Set Stormer vertical cutoff using L shell.          // Set Stormer vertical cutoff using L shell.
1227          orbitalinfo->cutoffsvl = 14.9/(xl*xl);          orbitalinfo->cutoffsvl = 14.295 / (xl*xl); //
1228            /*
1229              ---------- Forwarded message ----------
1230              Date: Wed, 09 May 2012 12:16:47 +0200
1231              From: Alessandro Bruno <alessandro.bruno@ba.infn.it>
1232              To: Mirko Boezio <mirko.boezio@ts.infn.it>
1233              Cc: Francesco S. Cafagna <Francesco.Cafagna@ba.infn.it>
1234              Subject: Störmer vertical cutoff
1235    
1236              Ciao Mirko,
1237              volevo segnalarti che il valore dello Störmer vertical cutoff nel Level2 è
1238              sovrastimato di circa il 4%.
1239              Dopo un'approfondita analisi con l'IGRF-05 abbiamo ricavano un valore pari
1240              a: 14.295 / L^2 anzichè 14.9 / L^2, valore obsoleto in quanto riferito agli
1241              anni '50.
1242            */
1243            //14.9/(xl*xl);
1244            orbitalinfo->igrf_icode = icode;
1245          //          //
1246        };              }      
1247        //        //
1248        if ( debug ) printf(" pitch angle \n");        if ( debug ) printf(" pitch angle \n");
1249        //        //
1250        // pitch angles        // pitch angles
1251        //        //
1252        if ( orbitalinfo->mode != 10 && orbitalinfo->mode != 5 && orbitalinfo->mode !=7 && orbitalinfo->mode != 9 ){        //if ( orbitalinfo->mode != 10 && orbitalinfo->mode != 5 && orbitalinfo->mode !=7 && orbitalinfo->mode != 9 ){
1253          if( orbitalinfo->TimeGap>0 && orbitalinfo->TimeGap<2000000){
1254          //          //
1255          Float_t Bx = -orbitalinfo->Bdown;                       //don't need for PamExp ExpOnly for all geography areas          if ( debug ) printf(" timegap %f \n",orbitalinfo->TimeGap);
1256          Float_t By = orbitalinfo->Beast;                        //don't need for PamExp ExpOnly for all geography areas          Float_t Bx = -orbitalinfo->Bdown;
1257          Float_t Bz = orbitalinfo->Bnorth;                       //don't need for PamExp ExpOnly for all geography areas          Float_t By = orbitalinfo->Beast;
1258            Float_t Bz = orbitalinfo->Bnorth;
1259          //          //
1260          TMatrixD Fij = PO->ECItoGreenwich(PO->QuatoECI(orbitalinfo->q0,orbitalinfo->q1,orbitalinfo->q2,orbitalinfo->q3),orbitalinfo->absTime);          TMatrixD Fij = PO->ECItoGreenwich(PO->QuatoECI(orbitalinfo->q0,orbitalinfo->q1,orbitalinfo->q2,orbitalinfo->q3),orbitalinfo->absTime);
1261            TMatrixD Gij = PO->ColPermutation(Fij);
1262          TMatrixD Dij = PO->GreenwichtoGEO(orbitalinfo->lat,orbitalinfo->lon,Fij);          TMatrixD Dij = PO->GreenwichtoGEO(orbitalinfo->lat,orbitalinfo->lon,Fij);
1263          TMatrixD Iij = PO->ColPermutation(Dij);          TMatrixD Iij = PO->ColPermutation(Dij);
1264          //          //
1265          orbitalinfo->Iij.ResizeTo(Iij);          orbitalinfo->Iij.ResizeTo(Iij);
1266          orbitalinfo->Iij = Iij;          orbitalinfo->Iij = Iij;
1267          //          //
1268          A1 = Iij(0,2);          //      A1 = Iij(0,2);
1269          A2 = Iij(1,2);          //      A2 = Iij(1,2);
1270          A3 = Iij(2,2);          //      A3 = Iij(2,2);
1271          //                //
1272          //      orbitalinfo->pamzenitangle = (Float_t)PO->GetPitchAngle(1,0,0,A1,A2,A3);                        // Angle between zenit and Pamela's main axiz          //      orbitalinfo->pamzenitangle = (Float_t)PO->GetPitchAngle(1,0,0,A1,A2,A3);                        // Angle between zenit and Pamela's main axiz
1273          //      orbitalinfo->pamBangle = (Float_t)PO->GetPitchAngle(A1,A2,A3,Bx,By,Bz);                 // Angle between Pamela's main axiz and B          //      orbitalinfo->pamBangle = (Float_t)PO->GetPitchAngle(A1,A2,A3,Bx,By,Bz);                 // Angle between Pamela's main axiz and B
1274          //          //
1275            if ( debug ) printf(" matrixes done  \n");
1276          if ( !standalone && tof->ntrk() > 0 ){          if ( !standalone && tof->ntrk() > 0 ){
1277              if ( debug ) printf(" !standalone \n");
1278            //            //
1279            Int_t nn = 0;            Int_t nn = 0;
1280            for(Int_t nt=0; nt < tof->ntrk(); nt++){              for(Int_t nt=0; nt < tof->ntrk(); nt++){  
# Line 1190  int OrbitalInfoCore(UInt_t run, TFile *f Line 1303  int OrbitalInfoCore(UInt_t run, TFile *f
1303                t_orb->Eij.ResizeTo(Eij);                t_orb->Eij.ResizeTo(Eij);
1304                t_orb->Eij = Eij;                t_orb->Eij = Eij;
1305                //                //
1306                TMatrixD Sij = PO->PamelatoGEO(Fij,Px,Py,Pz);                TMatrixD Sij = PO->PamelatoGEO(Gij,Px,Py,Pz);
1307                t_orb->Sij.ResizeTo(Sij);                t_orb->Sij.ResizeTo(Sij);
1308                t_orb->Sij = Sij;                t_orb->Sij = Sij;
1309                //                            //            
# Line 1215  int OrbitalInfoCore(UInt_t run, TFile *f Line 1328  int OrbitalInfoCore(UInt_t run, TFile *f
1328              //              //
1329            };            };
1330          } else {          } else {
1331            if ( debug ) printf(" mmm... mode %u standalone %i ntrk %i \n",orbitalinfo->mode,standalone,tof->ntrk());            if ( debug ) printf(" mmm... mode %u standalone  \n",orbitalinfo->mode);
1332          };          }
1333          //          //
1334        } else {        } else {
1335          if ( !standalone && tof->ntrk() > 0 ){          if ( !standalone && tof->ntrk() > 0 ){
# Line 1275  int OrbitalInfoCore(UInt_t run, TFile *f Line 1388  int OrbitalInfoCore(UInt_t run, TFile *f
1388      c1->SaveAs("9.Rollhyst.png");      c1->SaveAs("9.Rollhyst.png");
1389      delete c1;*/      delete c1;*/
1390    
1391        if ( verbose ) printf(" Clear before new run \n");
1392      delete dbtime;      delete dbtime;
1393      if ( L_QQ_Q_l_upper ) delete L_QQ_Q_l_upper;  
1394        if ( mcmdrc ) mcmdrc->Clear();
1395        mcmdrc = 0;
1396        
1397        if ( verbose ) printf(" Clear before new run1 \n");
1398      if ( L_QQ_Q_l_lower ) delete L_QQ_Q_l_lower;      if ( L_QQ_Q_l_lower ) delete L_QQ_Q_l_lower;
1399        if ( verbose ) printf(" Clear before new run2 \n");
1400        if ( L_QQ_Q_l_upper ) delete L_QQ_Q_l_upper;
1401        if ( verbose ) printf(" Clear before new run3 \n");
1402      if ( RYPang_upper ) delete RYPang_upper;      if ( RYPang_upper ) delete RYPang_upper;
1403        if ( verbose ) printf(" Clear before new run4 \n");
1404      if ( RYPang_lower ) delete RYPang_lower;      if ( RYPang_lower ) delete RYPang_lower;
1405    
1406        if ( l0tr ) l0tr->Delete();
1407        
1408        if ( verbose ) printf(" End run \n");
1409    
1410    }; // process all the runs    }; // process all the runs
1411        
1412    if (verbose) printf("\n Finished processing data \n");    if (verbose) printf("\n Finished processing data \n");
# Line 1313  int OrbitalInfoCore(UInt_t run, TFile *f Line 1440  int OrbitalInfoCore(UInt_t run, TFile *f
1440        };        };
1441        if (verbose) printf(" Finished successful copying!\n");        if (verbose) printf(" Finished successful copying!\n");
1442      };      };
1443        //if ( OrbitalInfotrclone )    OrbitalInfotrclone->Clear();        
1444        //if ( OrbitalInfotrclone )    OrbitalInfotrclone->Delete();        
1445    };    };
1446    //    //
1447    // Close files, delete old tree(s), write and close level2 file    // Close files, delete old tree(s), write and close level2 file
1448    //    //
1449    if ( l0File ) l0File->Close();    if ( l0File ) l0File->Close();
   if ( tempfile ) tempfile->Close();              
1450    if ( myfold ) gSystem->Unlink(tempname.str().c_str());    if ( myfold ) gSystem->Unlink(tempname.str().c_str());
1451    //    //
   if ( runinfo ) runinfo->Close();      
1452    if ( OrbitalInfotr ) OrbitalInfotr->SetName("OrbitalInfo");        if ( OrbitalInfotr ) OrbitalInfotr->SetName("OrbitalInfo");    
   if ( tof ) tof->Delete();  
   if ( ttof ) ttof->Delete();  
1453    //    //
1454    if ( file ){    if ( file ){
1455      file->cd();      file->cd();
1456      file->Write();      if ( OrbitalInfotr ) OrbitalInfotr->Write("OrbitalInfo", TObject::kOverwrite); // 10 RED bug fixed
1457    };    };
1458    //    //
1459      if (verbose) printf("\n Exiting...\n");
1460    
1461    if ( myfold ) gSystem->Unlink(OrbitalInfofolder.str().c_str());    if ( myfold ) gSystem->Unlink(OrbitalInfofolder.str().c_str());
1462    //    //
1463    // the end    // the end
# Line 1339  int OrbitalInfoCore(UInt_t run, TFile *f Line 1466  int OrbitalInfoCore(UInt_t run, TFile *f
1466      dbc->Close();      dbc->Close();
1467      delete dbc;      delete dbc;
1468    };    };
   if (verbose) printf("\n Exiting...\n");  
   if(OrbitalInfotr)OrbitalInfotr->Delete();  
1469    //    //
1470      if (verbose) printf("\n Exiting...\n");
1471      if ( tempfile ) tempfile->Close();            
1472      
1473    if ( PO ) delete PO;    if ( PO ) delete PO;
1474    if ( orbitalinfo ) delete orbitalinfo;    if ( gltle ) delete gltle;
1475    if ( orbitalinfoclone ) delete orbitalinfoclone;    if ( glparam ) delete glparam;
1476      if ( glparam2 ) delete glparam2;
1477      if ( glparam3 ) delete glparam3;
1478      if (verbose) printf("\n Exiting3...\n");
1479    if ( glroot ) delete glroot;    if ( glroot ) delete glroot;
1480      if (verbose) printf("\n Exiting4...\n");
1481      if ( runinfo ) runinfo->Close();    
1482    if ( runinfo ) delete runinfo;    if ( runinfo ) delete runinfo;
1483    
1484      if ( debug ){  
1485      cout << "1   0x" << OrbitalInfotr << endl;
1486      cout << "2   0x" << OrbitalInfotrclone << endl;
1487      cout << "3   0x" << l0tr << endl;
1488      cout << "4   0x" << tempOrbitalInfo << endl;
1489      cout << "5   0x" << ttof << endl;
1490      }
1491      //
1492      if ( debug )  file->ls();
1493    //    //
1494    if(code < 0)  throw code;    if(code < 0)  throw code;
1495    return(code);    return(code);
# Line 1394  UInt_t holeq(Double_t lower,Double_t upp Line 1537  UInt_t holeq(Double_t lower,Double_t upp
1537    Bool_t R10l = false;     // Sign of R10 mode in lower quaternions array    Bool_t R10l = false;     // Sign of R10 mode in lower quaternions array
1538    Bool_t R10u = false;     // Sign of R10 mode in upper quaternions array    Bool_t R10u = false;     // Sign of R10 mode in upper quaternions array
1539    Bool_t insm = false;     // Sign that we inside quaternions array    Bool_t insm = false;     // Sign that we inside quaternions array
1540    Bool_t mxtml = false;    // Sign of mixt mode in lower quaternions array    //  Bool_t mxtml = false;    // Sign of mixt mode in lower quaternions array
1541    Bool_t mxtmu = false;    // Sign of mixt mode in upper quaternions array    //  Bool_t mxtmu = false;    // Sign of mixt mode in upper quaternions array
1542    Bool_t npasm = false;     // Sign of normall pass between R10 and non R10 or between non R10 and R10    Bool_t npasm = false;     // Sign of normall pass between R10 and non R10 or between non R10 and R10
1543    UInt_t NCQl = 6;       // Number of correct quaternions in lower array    UInt_t NCQl = 6;       // Number of correct quaternions in lower array
1544    UInt_t NCQu = 6;       // Number of correct quaternions in upper array    //  UInt_t NCQu = 6;       // Number of correct quaternions in upper array
1545    if (f>0){    if (f>0){
1546      insm = true;      insm = true;
1547      if(Qupper->time[f]-Qupper->time[f-1]==30) R10u = false;      if(Qupper->time[f]-Qupper->time[f-1]==30) R10u = false;
# Line 1410  UInt_t holeq(Double_t lower,Double_t upp Line 1553  UInt_t holeq(Double_t lower,Double_t upp
1553      if((Qlower->time[5]-Qlower->time[0]==150)&&(Qlower->time[1]-Qlower->time[0]==30)) R10l = false;      if((Qlower->time[5]-Qlower->time[0]==150)&&(Qlower->time[1]-Qlower->time[0]==30)) R10l = false;
1554      if((Qupper->time[5]-Qupper->time[0]==150)&&(Qupper->time[1]-Qupper->time[0]==30)) R10u = false;      if((Qupper->time[5]-Qupper->time[0]==150)&&(Qupper->time[1]-Qupper->time[0]==30)) R10u = false;
1555      if((Qlower->time[5]-Qlower->time[0]<2)&&(Qlower->time[1]-Qlower->time[0]==30)){      if((Qlower->time[5]-Qlower->time[0]<2)&&(Qlower->time[1]-Qlower->time[0]==30)){
1556        mxtml = true;        //      mxtml = true;
1557        for(UInt_t i = 1; i < 6; i++){        for(UInt_t i = 1; i < 6; i++){
1558          if(Qlower->time[i]-Qlower->time[0]==30*i) NCQl=i;          if(Qlower->time[i]-Qlower->time[0]==30*i) NCQl=i;
1559        }        }
1560      }      }
1561      if((Qupper->time[5]-Qupper->time[0]<2)&&(Qupper->time[1]-Qupper->time[0]==30)){      //    if((Qupper->time[5]-Qupper->time[0]<2)&&(Qupper->time[1]-Qupper->time[0]==30)){
1562        mxtmu = true;        //      mxtmu = true;
1563        for(UInt_t i = 1; i < 6; i++){        //      for(UInt_t i = 1; i < 6; i++){
1564          if(Qupper->time[i]-Qupper->time[0]==30*i) NCQu=i;        //        if(Qupper->time[i]-Qupper->time[0]==30*i) NCQu=i;
1565        }        //      }
1566      }      //    }
1567    }    }
1568        
1569    if(((upper-lower==1.5)||(upper-lower==3.)||(upper-lower==30.)||(upper-lower==31.5)||(upper-lower==33.)||(upper-lower==181.5)||(upper-lower==210.)||(upper-lower==211.5))&&!insm) npasm = true;    if(((upper-lower==1.5)||(upper-lower==3.)||(upper-lower==30.)||(upper-lower==31.5)||(upper-lower==33.)||(upper-lower==181.5)||(upper-lower==210.)||(upper-lower==211.5))&&!insm) npasm = true;
# Line 1470  void sineparam(vector<Sine>& qsine, vect Line 1613  void sineparam(vector<Sine>& qsine, vect
1613    Int_t sinesize = 0;    Int_t sinesize = 0;
1614    Int_t nfi = 0;    Int_t nfi = 0;
1615    for(UInt_t mu = 0;mu<qtime.size();mu++){    for(UInt_t mu = 0;mu<qtime.size();mu++){
1616      if(Roll[mu]<1. && Pitch[mu]<1.){      //cout<<"Roll["<<mu<<"] = "<<Roll[mu]<<endl;
1617        if(TMath::Abs(Roll[mu])<1. && TMath::Abs(Pitch[mu])<1. && TMath::Abs(q[mu])<limsin){
1618        //cout<<"q["<<mu<<endl<<"] = "<<q[mu]<<endl;
1619        if(mulast!=0 && munow!=0 && munext!=0){mulast=munow;munow=munext;munext=mu;}
1620      if(munext==0 && munow!=0)munext=mu;      if(munext==0 && munow!=0)munext=mu;
1621      if(munow==0 && mulast!=0)munow=mu;      if(munow==0 && mulast!=0)munow=mu;
1622      if(mulast==0)mulast=mu;      if(mulast==0)mulast=mu;
1623      if(mulast!=0 && munow!=0 && munext!=0){mulast=munow;munow=munext;munext=mu;}      
1624      if(TMath::Abs(q[munow])>TMath::Abs(q[mulast]) && TMath::Abs(q[munow])>TMath::Abs(q[munext]) && TMath::Abs(q[munow])>limsin && qtime[munext]-qtime[mulast]>400)small_gap_on_ridge = true;      //cout<<"mulast = "<<mulast<<"\tmunow = "<<munow<<"\tmunext = "<<munext<<endl;
1625        //Int_t ref;
1626        //cin>>ref;
1627        if(TMath::Abs(q[munow])>TMath::Abs(q[mulast]) && TMath::Abs(q[munow])>TMath::Abs(q[munext]) && q[mulast]*q[munext]>0 && qtime[munext]-qtime[mulast]>400)small_gap_on_ridge = true;
1628      if(munext>mulast && (qtime[munext]-qtime[mulast]>=2000 || qtime[munext]-qtime[mulast]<0)){if(Large_gap){normal_way = false;Large_gap = false;}else{Large_gap = true;normal_way = false;}}else normal_way = true;      if(munext>mulast && (qtime[munext]-qtime[mulast]>=2000 || qtime[munext]-qtime[mulast]<0)){if(Large_gap){normal_way = false;Large_gap = false;}else{Large_gap = true;normal_way = false;}}else normal_way = true;
1629        //if(normal_way)cout<<"Normal_Way"<<endl;
1630      if(Large_gap || small_gap_on_ridge){      if(Large_gap || small_gap_on_ridge){
1631        //cout<<"Large gap..."<<endl;        //cout<<"Large gap..."<<endl;
1632        //if(small_gap_on_ridge)cout<<"small gap..."<<endl;        //if(small_gap_on_ridge)cout<<"small gap..."<<endl;
1633          //cout<<"q["<<mulast<<"] = "<<q[mulast]<<"\tq["<<munow<<"] = "<<q[munow]<<"\tq["<<munext<<"] = "<<q[munext]<<endl;
1634          //cout<<"qtime["<<mulast<<"] = "<<qtime[mulast]<<"\tqtime["<<munow<<"] = "<<qtime[munow]<<"\tqtime["<<munext<<"] = "<<qtime[munext]<<endl;
1635        increase = false;        increase = false;
1636        decrease = false;        decrease = false;
1637        if(nfi>0){        if(nfi>0){
1638          qsine.resize(qsine.size()-1);          qsine.resize(qsine.size()-1);
1639          sinesize = qsine.size();          sinesize = qsine.size();
1640            //cout<<"nfi was larger then zero"<<endl;
1641        }else{        }else{
1642            //cout<<"nfi was not larger then zero :( nfi = "<<nfi<<endl;
1643            //cout<<"qsine.size = "<<qsine.size()<<endl;
1644          if(!Period_is_defined){          if(!Period_is_defined){
1645              //cout<<"Period was defined"<<endl;
1646            if(qsine.size()>1){            if(qsine.size()>1){
1647              qsine[sinesize-1].b = qsine[sinesize-2].b;              qsine[sinesize-1].b = qsine[sinesize-2].b;
1648              qsine[sinesize-1].c = qsine[sinesize-2].c;              qsine[sinesize-1].c = qsine[sinesize-2].c;
# Line 1496  void sineparam(vector<Sine>& qsine, vect Line 1652  void sineparam(vector<Sine>& qsine, vect
1652            }            }
1653          }          }
1654          if(!Max_is_defined){          if(!Max_is_defined){
1655              //cout<<"Max was already defined"<<endl;
1656            if(qsine.size()>1)qsine[sinesize-1].A = qsine[sinesize-2].A;else qsine[sinesize-1].A = limsin;            if(qsine.size()>1)qsine[sinesize-1].A = qsine[sinesize-2].A;else qsine[sinesize-1].A = limsin;
1657          }          }
1658          qsine[sinesize-1].NeedFit = true;          qsine[sinesize-1].NeedFit = true;
1659        }        }
1660        qsine[sinesize-1].finishPoint = qtime[munow];        qsine[sinesize-1].finishPoint = qtime[munow];
1661          //cout<<"finish point before large gap = "<<qtime[munow]<<endl;
1662        nfi = 0;        nfi = 0;
1663        Max_is_defined = false;        Max_is_defined = false;
1664        Start_point_is_defined = false;        Start_point_is_defined = false;
1665        Period_is_defined = false;        Period_is_defined = false;
1666        small_gap_on_ridge = false;        small_gap_on_ridge = false;
1667      }      }
1668      if(munext > munow && munow > mulast && normal_way){      //cout<<"Slope "<<increase<<"\t"<<decrease<<endl;
1669        //cout<<"mulast = "<<mulast<<"\tmunow = "<<munow<<"\tmunext = "<<munext<<endl;
1670        if((munext>munow) && (munow>mulast) && normal_way){
1671        if(!increase && !decrease){        if(!increase && !decrease){
1672            //cout<<"Normal way have started"<<endl;
1673          qsine.resize(qsine.size()+1);          qsine.resize(qsine.size()+1);
1674          sinesize = qsine.size();          sinesize = qsine.size();
1675          qsine[sinesize-1].startPoint=qtime[mulast];          qsine[sinesize-1].startPoint=qtime[mulast];
# Line 1516  void sineparam(vector<Sine>& qsine, vect Line 1677  void sineparam(vector<Sine>& qsine, vect
1677          if(q[munext]<q[munow] && q[munow]<q[mulast]) decrease = true;          if(q[munext]<q[munow] && q[munow]<q[mulast]) decrease = true;
1678        }        }
1679        //if(TMath::Abs(q[munow])>TMath::Abs(q[mulast]) && TMath::Abs(q[munow])>TMath::Abs(q[munext]) && TMath::Abs(q[munow])>limsin && qtime[munow]-qtime[mulast]>=400 || qtime[munext]-qtime[munow]>=400){small_gap_on_ridge = true;mu--;continue;}        //if(TMath::Abs(q[munow])>TMath::Abs(q[mulast]) && TMath::Abs(q[munow])>TMath::Abs(q[munext]) && TMath::Abs(q[munow])>limsin && qtime[munow]-qtime[mulast]>=400 || qtime[munext]-qtime[munow]>=400){small_gap_on_ridge = true;mu--;continue;}
1680        if(TMath::Abs(q[munow])>TMath::Abs(q[mulast]) && TMath::Abs(q[munow])>TMath::Abs(q[munext]) && TMath::Abs(q[munow])>limsin && qtime[munow]-qtime[mulast]<400 && qtime[munext]-qtime[munow]<400){        if(TMath::Abs(q[munow])>TMath::Abs(q[mulast]) && TMath::Abs(q[munow])>TMath::Abs(q[munext]) && TMath::Abs(q[munow])>0.9*limsin && qtime[munow]-qtime[mulast]<400 && qtime[munext]-qtime[munow]<400){
1681          //cout<<"Max point is qtime = "<<qtime[munow]<<"\tq = "<<q[munow]<<endl;          //cout<<"Max point is qtime = "<<qtime[munow]<<"\tq = "<<q[munow]<<endl;
1682          if(q[munow]>q[mulast]){          if(q[munow]>q[mulast]){
1683            increase = false;            increase = false;
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